| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407748
Identifier: 41407748
GI number: 41407748
Start: 1804103
End: 1804579
Strand: Direct
Name: 41407748
Synonym: MAP1650
Alternate gene names: NA
Gene position: 1804103-1804579 (Clockwise)
Preceding gene: 41407746
Following gene: 41407751
Centisome position: 37.35
GC content: 66.46
Gene sequence:
>477_bases ATGGGCCGATTCACCAGGGCAGAAATCGAGAACGCCGTCGACAATTACACGCGGGTGGTCGAAGGATGCAGCGCGTCCGG CGACTGGCGCCCCTTCGCGGACCTGTTCACCGAGGACGTCGTCTACACCGAGCATCACTACGGGGTCTTCCGCGGCCGTG AGGCGGTGCGGGACTGGATCGTCGCGGTGATGGCGCCGTTTCCGCACATGCGATTTCCGTCCGGCTGGACCGCCTACGAC GAGGACAACGACGCGGTCGTGGTGATGATCAAGAACCTGCTGGATCACCCGACCGACCCGCAGGGCGAGCCGTTCTGGTT CCCCAACTGGACCCGGCTGGTCTACGCCGGCGACGGGCTGTTCAGCAGCGAGGAGGACATCTACAACCCCAACCGTGATG CGCCCGGGGTGATCGCGGCCTGGTTGCAGGCCGGCGGCCGGCTCGCCTCCAGCGAGATCCTGCAGCCCAACCCGTGA
Upstream 100 bases:
>100_bases GTCGAACAGATCCAACACGCTCATTCGCCATCCCCATTCGCCACGACCGACCCGATGAACTGACCCGAAAAACGGGAGAA CACGTTCTAGTGTGTCCGCT
Downstream 100 bases:
>100_bases TCAGGCCGGCGACAGATCCGGTTGGCGCCTGCGCCGCCGGGACCTGACCCTGTCCAGCGCCTGATCCCAGGCCAGCAGGG CGGTGGCCTTGAGGTAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MGRFTRAEIENAVDNYTRVVEGCSASGDWRPFADLFTEDVVYTEHHYGVFRGREAVRDWIVAVMAPFPHMRFPSGWTAYD EDNDAVVVMIKNLLDHPTDPQGEPFWFPNWTRLVYAGDGLFSSEEDIYNPNRDAPGVIAAWLQAGGRLASSEILQPNP
Sequences:
>Translated_158_residues MGRFTRAEIENAVDNYTRVVEGCSASGDWRPFADLFTEDVVYTEHHYGVFRGREAVRDWIVAVMAPFPHMRFPSGWTAYD EDNDAVVVMIKNLLDHPTDPQGEPFWFPNWTRLVYAGDGLFSSEEDIYNPNRDAPGVIAAWLQAGGRLASSEILQPNP >Mature_157_residues GRFTRAEIENAVDNYTRVVEGCSASGDWRPFADLFTEDVVYTEHHYGVFRGREAVRDWIVAVMAPFPHMRFPSGWTAYDE DNDAVVVMIKNLLDHPTDPQGEPFWFPNWTRLVYAGDGLFSSEEDIYNPNRDAPGVIAAWLQAGGRLASSEILQPNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17881; Mature: 17750
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRFTRAEIENAVDNYTRVVEGCSASGDWRPFADLFTEDVVYTEHHYGVFRGREAVRDWI CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHH VAVMAPFPHMRFPSGWTAYDEDNDAVVVMIKNLLDHPTDPQGEPFWFPNWTRLVYAGDGL HHHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCEECCCCEEEEEECCCC FSSEEDIYNPNRDAPGVIAAWLQAGGRLASSEILQPNP CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GRFTRAEIENAVDNYTRVVEGCSASGDWRPFADLFTEDVVYTEHHYGVFRGREAVRDWI CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHH VAVMAPFPHMRFPSGWTAYDEDNDAVVVMIKNLLDHPTDPQGEPFWFPNWTRLVYAGDGL HHHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCEECCCCEEEEEECCCC FSSEEDIYNPNRDAPGVIAAWLQAGGRLASSEILQPNP CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA