| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407746
Identifier: 41407746
GI number: 41407746
Start: 1802497
End: 1803222
Strand: Direct
Name: 41407746
Synonym: MAP1648
Alternate gene names: NA
Gene position: 1802497-1803222 (Clockwise)
Preceding gene: 41407745
Following gene: 41407748
Centisome position: 37.32
GC content: 72.73
Gene sequence:
>726_bases CTGATCGGGCGGGTCGACGGCACCGCACCGGCCCGGCGCCGGTGGCATCCTGGCCAGGTGGGGTTGCTGATCAGAGTGGC CGAGCTGTTGATCCTGGTGCTGCCGCTGGTCGGCGCGACCGTCGCCGTGGTGCGGGCGCTCGGCGCGCAGCGGCGGCGCA CCGACGAACCGGCGCGGGAAGTCGACGGGGCCCGGCCGCCCGAGGCCCGCGCCGGCGCCGACAATCAGGCGGCCCGGTGG CGCTCGATCCGGCGGGTCCTCGACGAGCACAGCCGCACCGACGAGCGGTGGCTGGACTACGAACTCGACGTCGCCAAGCT GCTGGACTTCCCGCTGATGACCGACATGCGCGATCCGCTGACCATCGCATTCCACAAGGCCAAGCTGCGCGCCGACTTCC TGCGACCCGCCAAGGCCGAAGATCTCCTGGACGATCCGGACGCGGCCGCGCACTACCTGGCCGCGGTCGAGGACTACGTA ACGGCGTTCAACGCCGCCGAGGCCGAGGCGACCCGCCGGCGCCGCACCGACTTCTCCCGCACCGACCAGCAACGAATTGC CCGGGCGCAGAGCCTGTTCCGGGTGGCGGCGGACCCCGCGGCGGCGGCGCACGAACGCCAGCGCGCCTACGATGTGGCCC GTCGCGAACTCGAGGGTCTGCTGGTGTTGCCGCCGGCGACCCGGGCGAACATCGAGCGCGCGATCTCCGGGGAGATCGAG AGTTGA
Upstream 100 bases:
>100_bases TGCGGCTGCTGCCCGCCGGCGCCATCCCGCGGACTACCAGCGGCAAGCTGGCCCGGCGGGCCTGCCGCGCCCAATACCTC GACGGCAGCCTAGGCGCCCG
Downstream 100 bases:
>100_bases AAATCCGAGTGCGCCAACGCTTTTCGTTCCGAGCTACGGGCAGCTGTATCCGCCGTCGATGACGATGTCCGAACCGGTCA TGTAGCTGGACGCCGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MIGRVDGTAPARRRWHPGQVGLLIRVAELLILVLPLVGATVAVVRALGAQRRRTDEPAREVDGARPPEARAGADNQAARW RSIRRVLDEHSRTDERWLDYELDVAKLLDFPLMTDMRDPLTIAFHKAKLRADFLRPAKAEDLLDDPDAAAHYLAAVEDYV TAFNAAEAEATRRRRTDFSRTDQQRIARAQSLFRVAADPAAAAHERQRAYDVARRELEGLLVLPPATRANIERAISGEIE S
Sequences:
>Translated_241_residues MIGRVDGTAPARRRWHPGQVGLLIRVAELLILVLPLVGATVAVVRALGAQRRRTDEPAREVDGARPPEARAGADNQAARW RSIRRVLDEHSRTDERWLDYELDVAKLLDFPLMTDMRDPLTIAFHKAKLRADFLRPAKAEDLLDDPDAAAHYLAAVEDYV TAFNAAEAEATRRRRTDFSRTDQQRIARAQSLFRVAADPAAAAHERQRAYDVARRELEGLLVLPPATRANIERAISGEIE S >Mature_241_residues MIGRVDGTAPARRRWHPGQVGLLIRVAELLILVLPLVGATVAVVRALGAQRRRTDEPAREVDGARPPEARAGADNQAARW RSIRRVLDEHSRTDERWLDYELDVAKLLDFPLMTDMRDPLTIAFHKAKLRADFLRPAKAEDLLDDPDAAAHYLAAVEDYV TAFNAAEAEATRRRRTDFSRTDQQRIARAQSLFRVAADPAAAAHERQRAYDVARRELEGLLVLPPATRANIERAISGEIE S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26980; Mature: 26980
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRVDGTAPARRRWHPGQVGLLIRVAELLILVLPLVGATVAVVRALGAQRRRTDEPARE CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VDGARPPEARAGADNQAARWRSIRRVLDEHSRTDERWLDYELDVAKLLDFPLMTDMRDPL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHCCHHHHCCCCCH TIAFHKAKLRADFLRPAKAEDLLDDPDAAAHYLAAVEDYVTAFNAAEAEATRRRRTDFSR HHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TDQQRIARAQSLFRVAADPAAAAHERQRAYDVARRELEGLLVLPPATRANIERAISGEIE HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCC S C >Mature Secondary Structure MIGRVDGTAPARRRWHPGQVGLLIRVAELLILVLPLVGATVAVVRALGAQRRRTDEPARE CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VDGARPPEARAGADNQAARWRSIRRVLDEHSRTDERWLDYELDVAKLLDFPLMTDMRDPL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHCCHHHHCCCCCH TIAFHKAKLRADFLRPAKAEDLLDDPDAAAHYLAAVEDYVTAFNAAEAEATRRRRTDFSR HHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TDQQRIARAQSLFRVAADPAAAAHERQRAYDVARRELEGLLVLPPATRANIERAISGEIE HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA