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The map label for this gene is nifU [H]

Identifier: 41407289

GI number: 41407289

Start: 1251836

End: 1252315

Strand: Direct

Name: nifU [H]

Synonym: MAP1191

Alternate gene names: 41407289

Gene position: 1251836-1252315 (Clockwise)

Preceding gene: 41407288

Following gene: 41407290

Centisome position: 25.92

GC content: 66.67

Gene sequence:

>480_bases
GTGCGTCTGGAACAGATGTATCAGGACGTGATCCTCGATCACTACAAGCACCCGCAGCATCGCGGGTTGCGGGAACCGTT
CGGCGCCGAGGTGTTTCACGTCAACCCCGTCTGCGGTGACGAGGTCACCCTGCGGGTGACGCTGTCCGACGACGGCGAGA
CCGTCGCCGACGTCTCCTATGACGGCCAGGGCTGCTCGATCAGCCAGGCGGCCACCTCGGTGCTCACCGAGCAGGTGATC
GGCCGCAGCGTCGAGGAGGCGCTCGACACCATCGGTGCGTTCGCCGAGATGGTGTCCTCGCGCGGCGCCGTCGAGGGCGA
CGAGGACGTGCTCGGCGACGGGATCGCGTTCGCCGGAGTGGCCAAATACCCGGCCCGGGTGAAATGCGCGCTGCTGGGCT
GGATGGCGTGCAAAGACGCGCTGGCCCAAGCCTATTCGAGAAGAGAGGTGACCGATGAGCGAAACCACCGCGCCGGATGA

Upstream 100 bases:

>100_bases
CGCCCGGGCGTCCTTCGCGGTGTACAACACCGCCGAGGAGGTCGACCGCCTGGTGGCGGGTGTGCGCCGCGCCCTGGACT
TCTTCGGCGGAGTGTGAGCC

Downstream 100 bases:

>100_bases
CGAACTGCTCGCCGACGTCGAGGAGGCGATGCGCGACGTCGTCGACCCCGAACTCGGCATCAACGTCGTCGACCTGGGAC
TCGTCTACGGGCTCAACGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MRLEQMYQDVILDHYKHPQHRGLREPFGAEVFHVNPVCGDEVTLRVTLSDDGETVADVSYDGQGCSISQAATSVLTEQVI
GRSVEEALDTIGAFAEMVSSRGAVEGDEDVLGDGIAFAGVAKYPARVKCALLGWMACKDALAQAYSRREVTDERNHRAG

Sequences:

>Translated_159_residues
MRLEQMYQDVILDHYKHPQHRGLREPFGAEVFHVNPVCGDEVTLRVTLSDDGETVADVSYDGQGCSISQAATSVLTEQVI
GRSVEEALDTIGAFAEMVSSRGAVEGDEDVLGDGIAFAGVAKYPARVKCALLGWMACKDALAQAYSRREVTDERNHRAG
>Mature_159_residues
MRLEQMYQDVILDHYKHPQHRGLREPFGAEVFHVNPVCGDEVTLRVTLSDDGETVADVSYDGQGCSISQAATSVLTEQVI
GRSVEEALDTIGAFAEMVSSRGAVEGDEDVLGDGIAFAGVAKYPARVKCALLGWMACKDALAQAYSRREVTDERNHRAG

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 17273; Mature: 17273

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLEQMYQDVILDHYKHPQHRGLREPFGAEVFHVNPVCGDEVTLRVTLSDDGETVADVSY
CCHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCEEEEEEE
DGQGCSISQAATSVLTEQVIGRSVEEALDTIGAFAEMVSSRGAVEGDEDVLGDGIAFAGV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHH
AKYPARVKCALLGWMACKDALAQAYSRREVTDERNHRAG
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRLEQMYQDVILDHYKHPQHRGLREPFGAEVFHVNPVCGDEVTLRVTLSDDGETVADVSY
CCHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCEEEEEEE
DGQGCSISQAATSVLTEQVIGRSVEEALDTIGAFAEMVSSRGAVEGDEDVLGDGIAFAGV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHH
AKYPARVKCALLGWMACKDALAQAYSRREVTDERNHRAG
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]