Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is ppe33 [H]

Identifier: 41407251

GI number: 41407251

Start: 1208714

End: 1210078

Strand: Direct

Name: ppe33 [H]

Synonym: MAP1153

Alternate gene names: 41407251

Gene position: 1208714-1210078 (Clockwise)

Preceding gene: 41407250

Following gene: 41407252

Centisome position: 25.03

GC content: 70.55

Gene sequence:

>1365_bases
ATGGTTTTCAGCGATTTCGCGACGCTGCCACCGGAGGTCATCTCCACCCAGATCCATGTCGGCCCGGGCGCCGTTCCGCT
GCTGGCCGCCGCGGCGGCATGGGACGGGCTGGCCGCCGAATTGCACGGCACCGCGGCTTCCTACGCCTCGGTGATCTCGG
AACTGGTCGTCGAATCGTGGCAGGGCTCGTCGTCGGGGTCCATGGCCGCCGCGGCGGCGCCCTACGTGGCGTGGCTGTCG
GCCACGGCCGGCCTGGCCGAGCAGACTGCCGCTCAGGCCCGGGCCGCGGCCGCGGCCTACGAGGCGGCCGTCGCGGCCAC
CGTGCCGCCGGCGGTGGTGGCGGCGAACCGCAGCCTGCTCGCCACGCTGTTGCAGACCAACATCCTGGGGCAGAACGACG
CGGCGATCGCGGCGACCGAGGACGAGTACGGCCAGATGTGGGCCCAAGACGTCGCCGCCATGTTCAGCTATGCCGCCGCG
TCGGAATCGGCCGGTGAGCTGACGCCGTTCGAGCAGGCGCCGGCCACCACCAATGACGCCGGACCGGCGACCCAGGCGGC
CGCCGCGGCCGCGGCGGAGTCGACGTCGCTGTCGTCCTGGCTGAAACAGCTAGAGGCCTACATCACCTCGCTCACCGGCC
AATACACCCAGTTCTGGCAGAACTTGATCGGCGGTGCCACGGGGAGCACGGAGATAGCACCGTTCTGGGAGACGCTGTAT
TCGAGCATTTCGCAGGTCGGCACTCAGGCGACGTGGACCAACGTCGTCAATGCCACCATCGGCCTTGGGGTCTCGCAGTG
GAAGAACTTCTTCATCTATGCGCCGTGGAGTGCCGCGATGGCCAAATCGTCGTTGGGCGCCGGGCTGGCGTCGCCCGGCC
ACATCGCTTCCGGCATCGCGGCAAAGCCCGTATCGGCCGTGCTGGGTAATGCGCCGACAGTGGGCAAGCTGTCGGTGCCG
GCCGGCTGGGCGACGGCCGCCCCGGCGATCAGGCTGGCCTCCACCGCGCTGCCGGCCACCAGCCTGGCCGCGGCCGCGGC
GACGGATTTCTCGGGCCTGGTGAACGAGGCGACCCTGGGCAGTCTGGCGGGCGGCGCGCTGGGCAGCCCGGCGGCGCGCG
TCGTCAGCACAACGGGCATCCCAACCCGCGCGATCACCGGCGAGCGCCGGCAGGGACCGGTCAAGCTCGACCGCATCATC
GCTCAACTGCAGGAGATGCCCGAGCAGGTGCAGCACTGGAACGTCGACGAGGCCGGCCTCGACGACCTGGTCGCCAGGCT
CAGGACGACGCCGGGCGTGCACGCCGTGCACGTGACGGACGGAGAGCAAGTCGCGGTCGGATCGCCCGCATCGAAACTGG
GATAG

Upstream 100 bases:

>100_bases
GGTCGACCGTGCGTGTGCCCGGTGCCGTGGCCGTCGACGACCTCGCGACCACGTCCACCGTCATCGTCATTCCGCCGAAC
GCGAAATAGGAGATACAGCA

Downstream 100 bases:

>100_bases
CGCAACGGTTTCCGCGCCGCCGCCGCACACCGCCATAGAGCATCGAAGGAGGATGCATGAAATTGCTGCTAGCGCTTCTC
GGTGTAGCGCTGGGCATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MVFSDFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVVESWQGSSSGSMAAAAAPYVAWLS
ATAGLAEQTAAQARAAAAAYEAAVAATVPPAVVAANRSLLATLLQTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAA
SESAGELTPFEQAPATTNDAGPATQAAAAAAAESTSLSSWLKQLEAYITSLTGQYTQFWQNLIGGATGSTEIAPFWETLY
SSISQVGTQATWTNVVNATIGLGVSQWKNFFIYAPWSAAMAKSSLGAGLASPGHIASGIAAKPVSAVLGNAPTVGKLSVP
AGWATAAPAIRLASTALPATSLAAAAATDFSGLVNEATLGSLAGGALGSPAARVVSTTGIPTRAITGERRQGPVKLDRII
AQLQEMPEQVQHWNVDEAGLDDLVARLRTTPGVHAVHVTDGEQVAVGSPASKLG

Sequences:

>Translated_454_residues
MVFSDFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVVESWQGSSSGSMAAAAAPYVAWLS
ATAGLAEQTAAQARAAAAAYEAAVAATVPPAVVAANRSLLATLLQTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAA
SESAGELTPFEQAPATTNDAGPATQAAAAAAAESTSLSSWLKQLEAYITSLTGQYTQFWQNLIGGATGSTEIAPFWETLY
SSISQVGTQATWTNVVNATIGLGVSQWKNFFIYAPWSAAMAKSSLGAGLASPGHIASGIAAKPVSAVLGNAPTVGKLSVP
AGWATAAPAIRLASTALPATSLAAAAATDFSGLVNEATLGSLAGGALGSPAARVVSTTGIPTRAITGERRQGPVKLDRII
AQLQEMPEQVQHWNVDEAGLDDLVARLRTTPGVHAVHVTDGEQVAVGSPASKLG
>Mature_454_residues
MVFSDFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVVESWQGSSSGSMAAAAAPYVAWLS
ATAGLAEQTAAQARAAAAAYEAAVAATVPPAVVAANRSLLATLLQTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAA
SESAGELTPFEQAPATTNDAGPATQAAAAAAAESTSLSSWLKQLEAYITSLTGQYTQFWQNLIGGATGSTEIAPFWETLY
SSISQVGTQATWTNVVNATIGLGVSQWKNFFIYAPWSAAMAKSSLGAGLASPGHIASGIAAKPVSAVLGNAPTVGKLSVP
AGWATAAPAIRLASTALPATSLAAAAATDFSGLVNEATLGSLAGGALGSPAARVVSTTGIPTRAITGERRQGPVKLDRII
AQLQEMPEQVQHWNVDEAGLDDLVARLRTTPGVHAVHVTDGEQVAVGSPASKLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PPE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022171
- InterPro:   IPR000030 [H]

Pfam domain/function: PF12484 PE_PPE_C; PF00823 PPE [H]

EC number: NA

Molecular weight: Translated: 45849; Mature: 45849

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFSDFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVVESW
CCCCCCCCCCHHHHCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
QGSSSGSMAAAAAPYVAWLSATAGLAEQTAAQARAAAAAYEAAVAATVPPAVVAANRSLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHH
ATLLQTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAASESAGELTPFEQAPATTNDA
HHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GPATQAAAAAAAESTSLSSWLKQLEAYITSLTGQYTQFWQNLIGGATGSTEIAPFWETLY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SSISQVGTQATWTNVVNATIGLGVSQWKNFFIYAPWSAAMAKSSLGAGLASPGHIASGIA
HHHHHHCCCHHHHHHHHHHHHCCHHHHCCEEEECCHHHHHHHHHHCCCCCCCCHHHCCCH
AKPVSAVLGNAPTVGKLSVPAGWATAAPAIRLASTALPATSLAAAAATDFSGLVNEATLG
HHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SLAGGALGSPAARVVSTTGIPTRAITGERRQGPVKLDRIIAQLQEMPEQVQHWNVDEAGL
HHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH
DDLVARLRTTPGVHAVHVTDGEQVAVGSPASKLG
HHHHHHHHCCCCCEEEEECCCCEEEECCCHHHCC
>Mature Secondary Structure
MVFSDFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVVESW
CCCCCCCCCCHHHHCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
QGSSSGSMAAAAAPYVAWLSATAGLAEQTAAQARAAAAAYEAAVAATVPPAVVAANRSLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHH
ATLLQTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAASESAGELTPFEQAPATTNDA
HHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GPATQAAAAAAAESTSLSSWLKQLEAYITSLTGQYTQFWQNLIGGATGSTEIAPFWETLY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SSISQVGTQATWTNVVNATIGLGVSQWKNFFIYAPWSAAMAKSSLGAGLASPGHIASGIA
HHHHHHCCCHHHHHHHHHHHHCCHHHHCCEEEECCHHHHHHHHHHCCCCCCCCHHHCCCH
AKPVSAVLGNAPTVGKLSVPAGWATAAPAIRLASTALPATSLAAAAATDFSGLVNEATLG
HHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SLAGGALGSPAARVVSTTGIPTRAITGERRQGPVKLDRIIAQLQEMPEQVQHWNVDEAGL
HHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH
DDLVARLRTTPGVHAVHVTDGEQVAVGSPASKLG
HHHHHHHHCCCCCEEEEECCCCEEEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]