| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yhbJ [C]
Identifier: 41407245
GI number: 41407245
Start: 1202227
End: 1203159
Strand: Direct
Name: yhbJ [C]
Synonym: MAP1147
Alternate gene names: 41407245
Gene position: 1202227-1203159 (Clockwise)
Preceding gene: 41407244
Following gene: 41407246
Centisome position: 24.89
GC content: 69.77
Gene sequence:
>933_bases GTGACGGGCCCGGGTGAGCTCGCGGGGAGCCGGCCGGTGGACGCGCACCTGGAAAACGGGGCCGGCATCGACGTCGTCCT GGTGACCGGATTGTCCGGCGCCGGACGGGGTACCGCGGCCAAGGTGCTCGAGGACCTCGGCTGGTATGTGGCCGACAACC TGCCCCCGCAGCTGATCACCCGGATGGTCGACCTGGGCATGGACGCCGGCTCGCGGATCACCCAGCTGGCGGTGGTGATG GACGTGCGGTCGCGCGGTTTCACCGGCGATCTGGACTCGGTGCGCACCGAACTGGCCACCCGCAACATCGCTCCGCGGGT GGTGTTCATGGAAGCATCCGACGACATGTTGGTGCGCCGCTACGAGCAGAACCGCCGCAGCCATCCGCTGCAGGGCGATC AGACGCTGGCCGAGGGCATCGCCGCCGAGCGGCGGATGCTGGCGCCGGTGCGGGCCACCGCGGATCTGATCATCGACACC TCGACGCTGTCGGTGCGTGCCCTGCGCGAGACCATCGAGCGGGCGTTCGGCGGCGGCGCCAACGCGACCATCAGCGTCAC CGTCGAGTCGTTCGGCTTCAAGTACGGCCTGCCGATGGACGCCGACATGGTGATGGACGTGCGCTTCCTGCCGAACCCGC ACTGGGTCGACGAATTGCGGCCCCGCACCGGGCAGGATCCCGCCGTGCGCGACTACGTGTTGGGCCAGCCCGGCGCGGCC GAGTTTCTCGACGCCTACCATCGGTTGCTGTCTCTGGTCGTCGACGGCTACCGCCGGGAGGGCAAGCGCTACATGACGGT CGCCATCGGCTGCACCGGCGGCAAGCATCGCAGCGTCGCGATCGCCGAGGCGCTGATGCAACGGCTGCAGGCCCAGCACG GTGAGGCCCAACTGTCGGTGCGGGTGTTGCACCGGGATCTGGGCCGCGAATGA
Upstream 100 bases:
>100_bases AGGCCACCGTCGACCAGATCACCGCCGTACCCGGCATCGGGGTGGCCACCGCGACCGCCGTCCTGGAGGCGTTGCGGCCC GACGAGTCCAAGGCCGCGCC
Downstream 100 bases:
>100_bases GCGAGCCGATCAACCGGGGCATCGTCGCGCTGGGCGGCGGACACGGCCTGTACGCGACGCTCTCGGCGGCCCGCCGGCTC ACCCCCTATGTCACCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MTGPGELAGSRPVDAHLENGAGIDVVLVTGLSGAGRGTAAKVLEDLGWYVADNLPPQLITRMVDLGMDAGSRITQLAVVM DVRSRGFTGDLDSVRTELATRNIAPRVVFMEASDDMLVRRYEQNRRSHPLQGDQTLAEGIAAERRMLAPVRATADLIIDT STLSVRALRETIERAFGGGANATISVTVESFGFKYGLPMDADMVMDVRFLPNPHWVDELRPRTGQDPAVRDYVLGQPGAA EFLDAYHRLLSLVVDGYRREGKRYMTVAIGCTGGKHRSVAIAEALMQRLQAQHGEAQLSVRVLHRDLGRE
Sequences:
>Translated_310_residues MTGPGELAGSRPVDAHLENGAGIDVVLVTGLSGAGRGTAAKVLEDLGWYVADNLPPQLITRMVDLGMDAGSRITQLAVVM DVRSRGFTGDLDSVRTELATRNIAPRVVFMEASDDMLVRRYEQNRRSHPLQGDQTLAEGIAAERRMLAPVRATADLIIDT STLSVRALRETIERAFGGGANATISVTVESFGFKYGLPMDADMVMDVRFLPNPHWVDELRPRTGQDPAVRDYVLGQPGAA EFLDAYHRLLSLVVDGYRREGKRYMTVAIGCTGGKHRSVAIAEALMQRLQAQHGEAQLSVRVLHRDLGRE >Mature_309_residues TGPGELAGSRPVDAHLENGAGIDVVLVTGLSGAGRGTAAKVLEDLGWYVADNLPPQLITRMVDLGMDAGSRITQLAVVMD VRSRGFTGDLDSVRTELATRNIAPRVVFMEASDDMLVRRYEQNRRSHPLQGDQTLAEGIAAERRMLAPVRATADLIIDTS TLSVRALRETIERAFGGGANATISVTVESFGFKYGLPMDADMVMDVRFLPNPHWVDELRPRTGQDPAVRDYVLGQPGAAE FLDAYHRLLSLVVDGYRREGKRYMTVAIGCTGGKHRSVAIAEALMQRLQAQHGEAQLSVRVLHRDLGRE
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=286, Percent_Identity=38.4615384615385, Blast_Score=195, Evalue=3e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1147_MYCPA (Q741E4)
Other databases:
- EMBL: AE016958 - RefSeq: NP_960081.1 - ProteinModelPortal: Q741E4 - EnsemblBacteria: EBMYCT00000039896 - GeneID: 2719211 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP1147 - NMPDR: fig|262316.1.peg.1147 - GeneTree: EBGT00050000017705 - HOGENOM: HBG289732 - OMA: GIGCTGG - ProtClustDB: PRK05416 - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 33804; Mature: 33673
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPGELAGSRPVDAHLENGAGIDVVLVTGLSGAGRGTAAKVLEDLGWYVADNLPPQLIT CCCCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCHHHHCCCCHHHHH RMVDLGMDAGSRITQLAVVMDVRSRGFTGDLDSVRTELATRNIAPRVVFMEASDDMLVRR HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHH YEQNRRSHPLQGDQTLAEGIAAERRMLAPVRATADLIIDTSTLSVRALRETIERAFGGGA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHCCCC NATISVTVESFGFKYGLPMDADMVMDVRFLPNPHWVDELRPRTGQDPAVRDYVLGQPGAA CCEEEEEEECCCEEECCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCHHHHHCCCCCHH EFLDAYHRLLSLVVDGYRREGKRYMTVAIGCTGGKHRSVAIAEALMQRLQAQHGEAQLSV HHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHH RVLHRDLGRE HHHHHHHCCC >Mature Secondary Structure TGPGELAGSRPVDAHLENGAGIDVVLVTGLSGAGRGTAAKVLEDLGWYVADNLPPQLIT CCCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCHHHHCCCCHHHHH RMVDLGMDAGSRITQLAVVMDVRSRGFTGDLDSVRTELATRNIAPRVVFMEASDDMLVRR HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHH YEQNRRSHPLQGDQTLAEGIAAERRMLAPVRATADLIIDTSTLSVRALRETIERAFGGGA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHCCCC NATISVTVESFGFKYGLPMDADMVMDVRFLPNPHWVDELRPRTGQDPAVRDYVLGQPGAA CCEEEEEEECCCEEECCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCHHHHHCCCCCHH EFLDAYHRLLSLVVDGYRREGKRYMTVAIGCTGGKHRSVAIAEALMQRLQAQHGEAQLSV HHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHH RVLHRDLGRE HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA