Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407215

Identifier: 41407215

GI number: 41407215

Start: 1169497

End: 1170009

Strand: Direct

Name: 41407215

Synonym: MAP1117

Alternate gene names: NA

Gene position: 1169497-1170009 (Clockwise)

Preceding gene: 41407214

Following gene: 41407216

Centisome position: 24.21

GC content: 70.76

Gene sequence:

>513_bases
ATGAATTCCGGCACGCTGGTGGGCTCGCTGATCTTCGCGGCCGTGCTGGTGGTGGTGATCGCGGTCGTGATCCAGCTGAT
GATGCGCGGCTGGATGCGCCGCGCCCGGCGGCAGGCCGAGCTGATCGGCGAGCTGCCCGGGGTGCCCGACAAGGTCGGCA
CCGCGACGGCCACCCTGCAGGGCGTCTATGTCGGGTGCACCCTGTCGCCGGCCTGGAACGACCGGGTGACGGCCGGCGAT
CTGGGCTACCGGAGCAAGGCGGCGCTGACCCGCTACCCGGAGGGCATCCTGCTGGAACGCATTCGCGCCACCCCGATTTG
GATTCCCCAGCAGTCGATCAGCGCGGTCCGCACCGAGCGGGGCATGGCCGGAAAGGTCGCGGCCCGCAACTCGATTCTGG
CGATCCGGTGGCGGCTGCCGTCGGGCGTGGAGATCGACACCGGCTTCCGGGCCAACAACCGGGGCGAATACGACGGCTGG
CTGCAGCCGGGGCGGGAGGAGCGGCGTTCGTGA

Upstream 100 bases:

>100_bases
GGCAAGGTCACCGCCCGCGACGGGAAGTGCCCGGCATGAGCCGCGCCGGCGACGATGCGGTGCGCCGCATGAGCGGCGGC
ACTGAGGAGGAGCGGGGCCA

Downstream 100 bases:

>100_bases
GTGGCAAGGCGCAACTGGTGCTCGAGGACGGCCGCGTCTTCACCGGCACGGCGTTCGGAGCGATCGGCCAAACCCTGGGC
GAGGCCGTGTTTTCCACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Export Or Membrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Secreted Protein

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNSGTLVGSLIFAAVLVVVIAVVIQLMMRGWMRRARRQAELIGELPGVPDKVGTATATLQGVYVGCTLSPAWNDRVTAGD
LGYRSKAALTRYPEGILLERIRATPIWIPQQSISAVRTERGMAGKVAARNSILAIRWRLPSGVEIDTGFRANNRGEYDGW
LQPGREERRS

Sequences:

>Translated_170_residues
MNSGTLVGSLIFAAVLVVVIAVVIQLMMRGWMRRARRQAELIGELPGVPDKVGTATATLQGVYVGCTLSPAWNDRVTAGD
LGYRSKAALTRYPEGILLERIRATPIWIPQQSISAVRTERGMAGKVAARNSILAIRWRLPSGVEIDTGFRANNRGEYDGW
LQPGREERRS
>Mature_170_residues
MNSGTLVGSLIFAAVLVVVIAVVIQLMMRGWMRRARRQAELIGELPGVPDKVGTATATLQGVYVGCTLSPAWNDRVTAGD
LGYRSKAALTRYPEGILLERIRATPIWIPQQSISAVRTERGMAGKVAARNSILAIRWRLPSGVEIDTGFRANNRGEYDGW
LQPGREERRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18661; Mature: 18661

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSGTLVGSLIFAAVLVVVIAVVIQLMMRGWMRRARRQAELIGELPGVPDKVGTATATLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEE
GVYVGCTLSPAWNDRVTAGDLGYRSKAALTRYPEGILLERIRATPIWIPQQSISAVRTER
EEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCEEECCHHHHHHHHHHC
GMAGKVAARNSILAIRWRLPSGVEIDTGFRANNRGEYDGWLQPGREERRS
CCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MNSGTLVGSLIFAAVLVVVIAVVIQLMMRGWMRRARRQAELIGELPGVPDKVGTATATLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEE
GVYVGCTLSPAWNDRVTAGDLGYRSKAALTRYPEGILLERIRATPIWIPQQSISAVRTER
EEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCEEECCHHHHHHHHHHC
GMAGKVAARNSILAIRWRLPSGVEIDTGFRANNRGEYDGWLQPGREERRS
CCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA