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The map label for this gene is yidP [H]

Identifier: 41407203

GI number: 41407203

Start: 1157828

End: 1158772

Strand: Direct

Name: yidP [H]

Synonym: MAP1105

Alternate gene names: 41407203

Gene position: 1157828-1158772 (Clockwise)

Preceding gene: 41407199

Following gene: 41407204

Centisome position: 23.97

GC content: 71.75

Gene sequence:

>945_bases
GTGACCGGGCCGGCAGTTCTGCTCATCCGGATCACAAACCCGCCCGGTGGCCGCGGGTGGCGCAATGACCCGGCGCGCCG
CGGTTTTGGCTGGTCGGGCCCGAACGCCACCCGGCGCAATGCCGTCGGTCGCCGGCTGCGACCCCGGTCGCCGGCCCGGA
AAACGCCCCTGAGCTGCGTTAGCGTGACCGTCGTGGCGCATCCAGTACCGATCGGGGGACCGCGGGCCGACCGGGCCCGT
CGGGTGGCCGACGTGTTGCGCCAGCAGATCCACGCCGACGCCTACCCGGACGGCCTGCCCGCCGAACTGGAGCTGGCCGA
CGAATTCTCGGTGTCGCGCAACACGATTCGCGAGGCGCTGGCCGTGCTCAAGCGCGAAGGCCTGATCGACCGCGGGCCCA
GGGTGGGCACCCATGTCGCGCAGCGCAAATACGACCACGCCCTGGACGCGCTGCTGGGGCTGAAGGAGACGTTCAAGGAC
CTCGGCGAGGTGCGCAACGAGGTGCGCGCGGCGATGCCGGTCACGGCGCCGCCGTCGGTGGCCCGCCGACTGCGGCTGGC
GCCGGGGGAGCAGGCGGTGTTCATCGAGCGGCTGCGCTACCTCGGCGAGCTGCCGCTCAGCCTGGACCTCACGTACCTGG
CCCCCGCGATCGGCCGCCAGGTGCTGGAGCATTCGCTGGAGACCAACGACGTGTTCGCCCTCATCGAACAGGTCAGCGGG
CAGCGGCTGGGCTCGGCGGCGCTGGCGCTCGAGGCCATCCCCGCCGACGCGCATTCGGCGGCCACGCTGCAGGTGCCCGA
CGGCGCGGCGCTGCTCATGCTGGAGCGGCTCACCAGCCTGGCCGACGGCACTCCCGTCGACCTCGAGTACATCCGGATGC
GGGGCGATCGAATCACCATGCGCGGCAACCTGTTCAGAGCCGAGCCGATGAGGAGCAACTCATGA

Upstream 100 bases:

>100_bases
ATCGCGGGCACCTTGGTCCAGGTCTGGCTCGACACCCCATCAGCTGCGCTCATGTGCGGTCATCCTCCGTCATCGGGATG
TTCAGCATGCCCACCGTAGC

Downstream 100 bases:

>100_bases
CGCTGATCCACAACACCCGCGTCGACGTGCCGGTGACCATCGACGAGTCGCTGTGCATCGAGGGCTGCACGCTGTGCGTC
GAGGTCTGCCCGCTCGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTGPAVLLIRITNPPGGRGWRNDPARRGFGWSGPNATRRNAVGRRLRPRSPARKTPLSCVSVTVVAHPVPIGGPRADRAR
RVADVLRQQIHADAYPDGLPAELELADEFSVSRNTIREALAVLKREGLIDRGPRVGTHVAQRKYDHALDALLGLKETFKD
LGEVRNEVRAAMPVTAPPSVARRLRLAPGEQAVFIERLRYLGELPLSLDLTYLAPAIGRQVLEHSLETNDVFALIEQVSG
QRLGSAALALEAIPADAHSAATLQVPDGAALLMLERLTSLADGTPVDLEYIRMRGDRITMRGNLFRAEPMRSNS

Sequences:

>Translated_314_residues
MTGPAVLLIRITNPPGGRGWRNDPARRGFGWSGPNATRRNAVGRRLRPRSPARKTPLSCVSVTVVAHPVPIGGPRADRAR
RVADVLRQQIHADAYPDGLPAELELADEFSVSRNTIREALAVLKREGLIDRGPRVGTHVAQRKYDHALDALLGLKETFKD
LGEVRNEVRAAMPVTAPPSVARRLRLAPGEQAVFIERLRYLGELPLSLDLTYLAPAIGRQVLEHSLETNDVFALIEQVSG
QRLGSAALALEAIPADAHSAATLQVPDGAALLMLERLTSLADGTPVDLEYIRMRGDRITMRGNLFRAEPMRSNS
>Mature_313_residues
TGPAVLLIRITNPPGGRGWRNDPARRGFGWSGPNATRRNAVGRRLRPRSPARKTPLSCVSVTVVAHPVPIGGPRADRARR
VADVLRQQIHADAYPDGLPAELELADEFSVSRNTIREALAVLKREGLIDRGPRVGTHVAQRKYDHALDALLGLKETFKDL
GEVRNEVRAAMPVTAPPSVARRLRLAPGEQAVFIERLRYLGELPLSLDLTYLAPAIGRQVLEHSLETNDVFALIEQVSGQ
RLGSAALALEAIPADAHSAATLQVPDGAALLMLERLTSLADGTPVDLEYIRMRGDRITMRGNLFRAEPMRSNS

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790118, Length=215, Percent_Identity=30.6976744186047, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1786950, Length=167, Percent_Identity=28.7425149700599, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI87082252, Length=208, Percent_Identity=26.4423076923077, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 34271; Mature: 34140

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPAVLLIRITNPPGGRGWRNDPARRGFGWSGPNATRRNAVGRRLRPRSPARKTPLSCV
CCCCEEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHE
SVTVVAHPVPIGGPRADRARRVADVLRQQIHADAYPDGLPAELELADEFSVSRNTIREAL
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHH
AVLKREGLIDRGPRVGTHVAQRKYDHALDALLGLKETFKDLGEVRNEVRAAMPVTAPPSV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ARRLRLAPGEQAVFIERLRYLGELPLSLDLTYLAPAIGRQVLEHSLETNDVFALIEQVSG
HHHHHCCCCCHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
QRLGSAALALEAIPADAHSAATLQVPDGAALLMLERLTSLADGTPVDLEYIRMRGDRITM
CHHCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHEECCCEEEE
RGNLFRAEPMRSNS
ECCEEECCCCCCCC
>Mature Secondary Structure 
TGPAVLLIRITNPPGGRGWRNDPARRGFGWSGPNATRRNAVGRRLRPRSPARKTPLSCV
CCCEEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHE
SVTVVAHPVPIGGPRADRARRVADVLRQQIHADAYPDGLPAELELADEFSVSRNTIREAL
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHH
AVLKREGLIDRGPRVGTHVAQRKYDHALDALLGLKETFKDLGEVRNEVRAAMPVTAPPSV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ARRLRLAPGEQAVFIERLRYLGELPLSLDLTYLAPAIGRQVLEHSLETNDVFALIEQVSG
HHHHHCCCCCHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
QRLGSAALALEAIPADAHSAATLQVPDGAALLMLERLTSLADGTPVDLEYIRMRGDRITM
CHHCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHEECCCEEEE
RGNLFRAEPMRSNS
ECCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]