| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is gsiC [H]
Identifier: 41407185
GI number: 41407185
Start: 1141173
End: 1141613
Strand: Direct
Name: gsiC [H]
Synonym: MAP1087
Alternate gene names: 41407185
Gene position: 1141173-1141613 (Clockwise)
Preceding gene: 41407184
Following gene: 41407186
Centisome position: 23.63
GC content: 68.93
Gene sequence:
>441_bases ATGCTCGGCTACGTTCTCGCCCGGATCGGCCAGTCGGCCATCGTGCTGCTGGCGGTCTTCAGCCTGGTGTTCTGGGGCGT CAGCATCCTGCCGGCCGATCCGGCGGCGATCTTCGTGGCCAAGGGGGAGGGCTACTTCAACCCCGACATCGTCGCGCAGG TCAAGGCGTTCTACGGCTACGACCGGCCGCTGTGGGTGCAGTACTTCGCGCAGCTGAACCAGGTGCTGCACGGGCATTTC GGCTTCTCGCTGTCCAGCGGTCAGGCCGTCACCGACCGGATCGGCGGGGTGATCGGCGAGACCCTGAAACTGGCGGCCAC CGCCACCGGGTTCGCGGTGCTGTTCGCGGTGTCGGTCACCGCGCTGGCGACCACCTGCGCGCCGGTGCGGTCGGTGCTGC GCGCGATCCCGCCGCTGTTCGGCGCGGTCCCCACGTTTTGA
Upstream 100 bases:
>100_bases GGGATGAGGTGCAGGTGCACGCCGCCGCACCCAACGTGCACGTGGAATTCACCCGCTACACCGAGCCGCTGCTGCAGAGC GCCTGGAAGGCGTGAGGGGG
Downstream 100 bases:
>100_bases CTCGGATTGGTTGTGCTGCAAGTGTTTTCGGTGCAGCTGGGCCTGATCTCGTTGTTCCCGGACGGATCCGTGACGTCGCT GCTGGTCGCCGCGCTGGTGC
Product: hypothetical protein
Products: ADP; phosphate; dipeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLGYVLARIGQSAIVLLAVFSLVFWGVSILPADPAAIFVAKGEGYFNPDIVAQVKAFYGYDRPLWVQYFAQLNQVLHGHF GFSLSSGQAVTDRIGGVIGETLKLAATATGFAVLFAVSVTALATTCAPVRSVLRAIPPLFGAVPTF
Sequences:
>Translated_146_residues MLGYVLARIGQSAIVLLAVFSLVFWGVSILPADPAAIFVAKGEGYFNPDIVAQVKAFYGYDRPLWVQYFAQLNQVLHGHF GFSLSSGQAVTDRIGGVIGETLKLAATATGFAVLFAVSVTALATTCAPVRSVLRAIPPLFGAVPTF >Mature_146_residues MLGYVLARIGQSAIVLLAVFSLVFWGVSILPADPAAIFVAKGEGYFNPDIVAQVKAFYGYDRPLWVQYFAQLNQVLHGHF GFSLSSGQAVTDRIGGVIGETLKLAATATGFAVLFAVSVTALATTCAPVRSVLRAIPPLFGAVPTF
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0601
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789965, Length=123, Percent_Identity=31.7073170731707, Blast_Score=60, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 15436; Mature: 15436
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGYVLARIGQSAIVLLAVFSLVFWGVSILPADPAAIFVAKGEGYFNPDIVAQVKAFYGY CHHHHHHHHCHHHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCC DRPLWVQYFAQLNQVLHGHFGFSLSSGQAVTDRIGGVIGETLKLAATATGFAVLFAVSVT CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALATTCAPVRSVLRAIPPLFGAVPTF HHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLGYVLARIGQSAIVLLAVFSLVFWGVSILPADPAAIFVAKGEGYFNPDIVAQVKAFYGY CHHHHHHHHCHHHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCC DRPLWVQYFAQLNQVLHGHFGFSLSSGQAVTDRIGGVIGETLKLAATATGFAVLFAVSVT CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALATTCAPVRSVLRAIPPLFGAVPTF HHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; dipeptides [Periplasm]; H2O [C]
Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA