Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is gsiC [H]

Identifier: 41407185

GI number: 41407185

Start: 1141173

End: 1141613

Strand: Direct

Name: gsiC [H]

Synonym: MAP1087

Alternate gene names: 41407185

Gene position: 1141173-1141613 (Clockwise)

Preceding gene: 41407184

Following gene: 41407186

Centisome position: 23.63

GC content: 68.93

Gene sequence:

>441_bases
ATGCTCGGCTACGTTCTCGCCCGGATCGGCCAGTCGGCCATCGTGCTGCTGGCGGTCTTCAGCCTGGTGTTCTGGGGCGT
CAGCATCCTGCCGGCCGATCCGGCGGCGATCTTCGTGGCCAAGGGGGAGGGCTACTTCAACCCCGACATCGTCGCGCAGG
TCAAGGCGTTCTACGGCTACGACCGGCCGCTGTGGGTGCAGTACTTCGCGCAGCTGAACCAGGTGCTGCACGGGCATTTC
GGCTTCTCGCTGTCCAGCGGTCAGGCCGTCACCGACCGGATCGGCGGGGTGATCGGCGAGACCCTGAAACTGGCGGCCAC
CGCCACCGGGTTCGCGGTGCTGTTCGCGGTGTCGGTCACCGCGCTGGCGACCACCTGCGCGCCGGTGCGGTCGGTGCTGC
GCGCGATCCCGCCGCTGTTCGGCGCGGTCCCCACGTTTTGA

Upstream 100 bases:

>100_bases
GGGATGAGGTGCAGGTGCACGCCGCCGCACCCAACGTGCACGTGGAATTCACCCGCTACACCGAGCCGCTGCTGCAGAGC
GCCTGGAAGGCGTGAGGGGG

Downstream 100 bases:

>100_bases
CTCGGATTGGTTGTGCTGCAAGTGTTTTCGGTGCAGCTGGGCCTGATCTCGTTGTTCCCGGACGGATCCGTGACGTCGCT
GCTGGTCGCCGCGCTGGTGC

Product: hypothetical protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLGYVLARIGQSAIVLLAVFSLVFWGVSILPADPAAIFVAKGEGYFNPDIVAQVKAFYGYDRPLWVQYFAQLNQVLHGHF
GFSLSSGQAVTDRIGGVIGETLKLAATATGFAVLFAVSVTALATTCAPVRSVLRAIPPLFGAVPTF

Sequences:

>Translated_146_residues
MLGYVLARIGQSAIVLLAVFSLVFWGVSILPADPAAIFVAKGEGYFNPDIVAQVKAFYGYDRPLWVQYFAQLNQVLHGHF
GFSLSSGQAVTDRIGGVIGETLKLAATATGFAVLFAVSVTALATTCAPVRSVLRAIPPLFGAVPTF
>Mature_146_residues
MLGYVLARIGQSAIVLLAVFSLVFWGVSILPADPAAIFVAKGEGYFNPDIVAQVKAFYGYDRPLWVQYFAQLNQVLHGHF
GFSLSSGQAVTDRIGGVIGETLKLAATATGFAVLFAVSVTALATTCAPVRSVLRAIPPLFGAVPTF

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=123, Percent_Identity=31.7073170731707, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 15436; Mature: 15436

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGYVLARIGQSAIVLLAVFSLVFWGVSILPADPAAIFVAKGEGYFNPDIVAQVKAFYGY
CHHHHHHHHCHHHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCC
DRPLWVQYFAQLNQVLHGHFGFSLSSGQAVTDRIGGVIGETLKLAATATGFAVLFAVSVT
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALATTCAPVRSVLRAIPPLFGAVPTF
HHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLGYVLARIGQSAIVLLAVFSLVFWGVSILPADPAAIFVAKGEGYFNPDIVAQVKAFYGY
CHHHHHHHHCHHHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCC
DRPLWVQYFAQLNQVLHGHFGFSLSSGQAVTDRIGGVIGETLKLAATATGFAVLFAVSVT
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALATTCAPVRSVLRAIPPLFGAVPTF
HHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA