| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407167
Identifier: 41407167
GI number: 41407167
Start: 1121268
End: 1122290
Strand: Direct
Name: 41407167
Synonym: MAP1069
Alternate gene names: NA
Gene position: 1121268-1122290 (Clockwise)
Preceding gene: 41407166
Following gene: 41407170
Centisome position: 23.22
GC content: 66.76
Gene sequence:
>1023_bases ATGCGTGACTTCACCTGCCCCAAGTGCGGCCAGCGCCTGACCTTCGAGAACTCCACCTGCCTGAATTGCGGTAGCGCGCT GGGGTTTTCGATCGAGCAGATGGCACTGCTGGTGATCTCGGAGGACGAGACGAGCGGGCACGCCGGCTTCGTGCCCGCCA GCGAATACCAGTTGTGCGCCAATCTGCTTCTGGCCGAATGCAATTGGCTGGTCCCGGTGAACGAGCCGCGGTTGCTGTGC GCGTCCTGCGTGCTGACCACCGAGCGGCCCAACGACGCCGACTCCGTGGGGCTGGCCGAGTTCGCCCGCGCCGAGGCGGC CAAACGCCGGCTGATCGCCGAGCTGCACGAGCTGCGGCTGCCGATCGTCGGGCGTGATCAGGACCCCGACTACGGCCTGG CCTTCCGGCTGCTGTCCAGCGCGCACGAGAACGTGCTGACCGGTCACCAGAACGGGGTCATCACACTGGATTTGGCCGAG GGCGACGACGTGCACCGCGAACAGCTGCGGGTCGAGATGGACGAGCCGTACCGGACGCTGCTCGGGCACTTCCGGCACGA GATCGGGCACTACTACTTCTACCGGCTGATCGCCCCGCACCCCGACCACCTGCGCCGGTTCAACGAGCTGTTCGGCGATC CCGACGCCGACTACCAGCAGGCGCTGGACCGGCACTACAGCGAGGGCGCGCCGGAGGGCTGGCAGGAGAACTTCGTCTCG TCATATGCCACCATGCACGCCAGCGAGGATTGGGCCGAGACGTTCGCCCACTACCTGCACATCCGCGACACGCTCGACAC CTCGGCGTGGTGCGGGCTGGCCCCGGCGTCGGCCACCATCGATCGTCCGGCGTTGGGGCCCAGCGCTTTTCAGACGATCA TCGACACGTGGCTGCCGTTGTCGTGGTCACTGAACATGGTGAACCGGTCCATGGGCCACGACGACCTGTACCCATTCGTG CTGCCGGCCGCGGTGCTGGAGAAGATGCAGTTCATCCACGCCGTGGTCGACGGGGCCGGTTAG
Upstream 100 bases:
>100_bases GGACGCGGCCGCGACTACGCCGACGTCCCGCCGCTGCGGGGCATCATCTACACCAACTCACAGCACAGCGTGATCGACGT GTCCGTCGACGTGGTGCCCT
Downstream 100 bases:
>100_bases GCCGGCATCACGCGGCGCACGTCGGGACCCCACAGCGGCTGCATGCCGCCGGGCAGCGCCAGCTGGGTGGTGGTGAGCAC CTCGGCCAGGCTGCGCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDETSGHAGFVPASEYQLCANLLLAECNWLVPVNEPRLLC ASCVLTTERPNDADSVGLAEFARAEAAKRRLIAELHELRLPIVGRDQDPDYGLAFRLLSSAHENVLTGHQNGVITLDLAE GDDVHREQLRVEMDEPYRTLLGHFRHEIGHYYFYRLIAPHPDHLRRFNELFGDPDADYQQALDRHYSEGAPEGWQENFVS SYATMHASEDWAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPLSWSLNMVNRSMGHDDLYPFV LPAAVLEKMQFIHAVVDGAG
Sequences:
>Translated_340_residues MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDETSGHAGFVPASEYQLCANLLLAECNWLVPVNEPRLLC ASCVLTTERPNDADSVGLAEFARAEAAKRRLIAELHELRLPIVGRDQDPDYGLAFRLLSSAHENVLTGHQNGVITLDLAE GDDVHREQLRVEMDEPYRTLLGHFRHEIGHYYFYRLIAPHPDHLRRFNELFGDPDADYQQALDRHYSEGAPEGWQENFVS SYATMHASEDWAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPLSWSLNMVNRSMGHDDLYPFV LPAAVLEKMQFIHAVVDGAG >Mature_340_residues MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDETSGHAGFVPASEYQLCANLLLAECNWLVPVNEPRLLC ASCVLTTERPNDADSVGLAEFARAEAAKRRLIAELHELRLPIVGRDQDPDYGLAFRLLSSAHENVLTGHQNGVITLDLAE GDDVHREQLRVEMDEPYRTLLGHFRHEIGHYYFYRLIAPHPDHLRRFNELFGDPDADYQQALDRHYSEGAPEGWQENFVS SYATMHASEDWAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPLSWSLNMVNRSMGHDDLYPFV LPAAVLEKMQFIHAVVDGAG
Specific function: Unknown
COG id: COG4307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011201 [H]
Pfam domain/function: PF10005 DUF2248 [H]
EC number: NA
Molecular weight: Translated: 38088; Mature: 38088
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDETSGHAGFVPASEYQLCA CCCCCCCCCCCEEEECCCCHHCCCHHHCCCHHHEEEEEEECCCCCCCCCCCCCHHHHHHH NLLLAECNWLVPVNEPRLLCASCVLTTERPNDADSVGLAEFARAEAAKRRLIAELHELRL HHHHHHCCEEEECCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PIVGRDQDPDYGLAFRLLSSAHENVLTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHH LGHFRHEIGHYYFYRLIAPHPDHLRRFNELFGDPDADYQQALDRHYSEGAPEGWQENFVS HHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHH SYATMHASEDWAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPL HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC SWSLNMVNRSMGHDDLYPFVLPAAVLEKMQFIHAVVDGAG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDETSGHAGFVPASEYQLCA CCCCCCCCCCCEEEECCCCHHCCCHHHCCCHHHEEEEEEECCCCCCCCCCCCCHHHHHHH NLLLAECNWLVPVNEPRLLCASCVLTTERPNDADSVGLAEFARAEAAKRRLIAELHELRL HHHHHHCCEEEECCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PIVGRDQDPDYGLAFRLLSSAHENVLTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHH LGHFRHEIGHYYFYRLIAPHPDHLRRFNELFGDPDADYQQALDRHYSEGAPEGWQENFVS HHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHH SYATMHASEDWAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPL HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC SWSLNMVNRSMGHDDLYPFVLPAAVLEKMQFIHAVVDGAG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]