Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407167

Identifier: 41407167

GI number: 41407167

Start: 1121268

End: 1122290

Strand: Direct

Name: 41407167

Synonym: MAP1069

Alternate gene names: NA

Gene position: 1121268-1122290 (Clockwise)

Preceding gene: 41407166

Following gene: 41407170

Centisome position: 23.22

GC content: 66.76

Gene sequence:

>1023_bases
ATGCGTGACTTCACCTGCCCCAAGTGCGGCCAGCGCCTGACCTTCGAGAACTCCACCTGCCTGAATTGCGGTAGCGCGCT
GGGGTTTTCGATCGAGCAGATGGCACTGCTGGTGATCTCGGAGGACGAGACGAGCGGGCACGCCGGCTTCGTGCCCGCCA
GCGAATACCAGTTGTGCGCCAATCTGCTTCTGGCCGAATGCAATTGGCTGGTCCCGGTGAACGAGCCGCGGTTGCTGTGC
GCGTCCTGCGTGCTGACCACCGAGCGGCCCAACGACGCCGACTCCGTGGGGCTGGCCGAGTTCGCCCGCGCCGAGGCGGC
CAAACGCCGGCTGATCGCCGAGCTGCACGAGCTGCGGCTGCCGATCGTCGGGCGTGATCAGGACCCCGACTACGGCCTGG
CCTTCCGGCTGCTGTCCAGCGCGCACGAGAACGTGCTGACCGGTCACCAGAACGGGGTCATCACACTGGATTTGGCCGAG
GGCGACGACGTGCACCGCGAACAGCTGCGGGTCGAGATGGACGAGCCGTACCGGACGCTGCTCGGGCACTTCCGGCACGA
GATCGGGCACTACTACTTCTACCGGCTGATCGCCCCGCACCCCGACCACCTGCGCCGGTTCAACGAGCTGTTCGGCGATC
CCGACGCCGACTACCAGCAGGCGCTGGACCGGCACTACAGCGAGGGCGCGCCGGAGGGCTGGCAGGAGAACTTCGTCTCG
TCATATGCCACCATGCACGCCAGCGAGGATTGGGCCGAGACGTTCGCCCACTACCTGCACATCCGCGACACGCTCGACAC
CTCGGCGTGGTGCGGGCTGGCCCCGGCGTCGGCCACCATCGATCGTCCGGCGTTGGGGCCCAGCGCTTTTCAGACGATCA
TCGACACGTGGCTGCCGTTGTCGTGGTCACTGAACATGGTGAACCGGTCCATGGGCCACGACGACCTGTACCCATTCGTG
CTGCCGGCCGCGGTGCTGGAGAAGATGCAGTTCATCCACGCCGTGGTCGACGGGGCCGGTTAG

Upstream 100 bases:

>100_bases
GGACGCGGCCGCGACTACGCCGACGTCCCGCCGCTGCGGGGCATCATCTACACCAACTCACAGCACAGCGTGATCGACGT
GTCCGTCGACGTGGTGCCCT

Downstream 100 bases:

>100_bases
GCCGGCATCACGCGGCGCACGTCGGGACCCCACAGCGGCTGCATGCCGCCGGGCAGCGCCAGCTGGGTGGTGGTGAGCAC
CTCGGCCAGGCTGCGCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDETSGHAGFVPASEYQLCANLLLAECNWLVPVNEPRLLC
ASCVLTTERPNDADSVGLAEFARAEAAKRRLIAELHELRLPIVGRDQDPDYGLAFRLLSSAHENVLTGHQNGVITLDLAE
GDDVHREQLRVEMDEPYRTLLGHFRHEIGHYYFYRLIAPHPDHLRRFNELFGDPDADYQQALDRHYSEGAPEGWQENFVS
SYATMHASEDWAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPLSWSLNMVNRSMGHDDLYPFV
LPAAVLEKMQFIHAVVDGAG

Sequences:

>Translated_340_residues
MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDETSGHAGFVPASEYQLCANLLLAECNWLVPVNEPRLLC
ASCVLTTERPNDADSVGLAEFARAEAAKRRLIAELHELRLPIVGRDQDPDYGLAFRLLSSAHENVLTGHQNGVITLDLAE
GDDVHREQLRVEMDEPYRTLLGHFRHEIGHYYFYRLIAPHPDHLRRFNELFGDPDADYQQALDRHYSEGAPEGWQENFVS
SYATMHASEDWAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPLSWSLNMVNRSMGHDDLYPFV
LPAAVLEKMQFIHAVVDGAG
>Mature_340_residues
MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDETSGHAGFVPASEYQLCANLLLAECNWLVPVNEPRLLC
ASCVLTTERPNDADSVGLAEFARAEAAKRRLIAELHELRLPIVGRDQDPDYGLAFRLLSSAHENVLTGHQNGVITLDLAE
GDDVHREQLRVEMDEPYRTLLGHFRHEIGHYYFYRLIAPHPDHLRRFNELFGDPDADYQQALDRHYSEGAPEGWQENFVS
SYATMHASEDWAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPLSWSLNMVNRSMGHDDLYPFV
LPAAVLEKMQFIHAVVDGAG

Specific function: Unknown

COG id: COG4307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011201 [H]

Pfam domain/function: PF10005 DUF2248 [H]

EC number: NA

Molecular weight: Translated: 38088; Mature: 38088

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDETSGHAGFVPASEYQLCA
CCCCCCCCCCCEEEECCCCHHCCCHHHCCCHHHEEEEEEECCCCCCCCCCCCCHHHHHHH
NLLLAECNWLVPVNEPRLLCASCVLTTERPNDADSVGLAEFARAEAAKRRLIAELHELRL
HHHHHHCCEEEECCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PIVGRDQDPDYGLAFRLLSSAHENVLTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHH
LGHFRHEIGHYYFYRLIAPHPDHLRRFNELFGDPDADYQQALDRHYSEGAPEGWQENFVS
HHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
SYATMHASEDWAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPL
HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
SWSLNMVNRSMGHDDLYPFVLPAAVLEKMQFIHAVVDGAG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDETSGHAGFVPASEYQLCA
CCCCCCCCCCCEEEECCCCHHCCCHHHCCCHHHEEEEEEECCCCCCCCCCCCCHHHHHHH
NLLLAECNWLVPVNEPRLLCASCVLTTERPNDADSVGLAEFARAEAAKRRLIAELHELRL
HHHHHHCCEEEECCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PIVGRDQDPDYGLAFRLLSSAHENVLTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHH
LGHFRHEIGHYYFYRLIAPHPDHLRRFNELFGDPDADYQQALDRHYSEGAPEGWQENFVS
HHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
SYATMHASEDWAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPL
HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
SWSLNMVNRSMGHDDLYPFVLPAAVLEKMQFIHAVVDGAG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]