| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is hsaD [H]
Identifier: 41406791
GI number: 41406791
Start: 714089
End: 714952
Strand: Direct
Name: hsaD [H]
Synonym: MAP0693
Alternate gene names: 41406791
Gene position: 714089-714952 (Clockwise)
Preceding gene: 41406788
Following gene: 41406792
Centisome position: 14.79
GC content: 68.06
Gene sequence:
>864_bases GTGGCGGAGTTCGAGAGCATATGGAGTGACCTCCAGGGCGTCGCGTTCGAGCAGGGCTACCTCGATGCCGGCGGCATCCG GACCCGCTACCTGCGCGCCGGCGATCCCGGCAAGCCGGTGCTGGTCCTGTTGCACGGGTCCGGCGGTCACGCCGAGGCGT ACGTCCGCAACCTGGCCGCGCACGCCGACCATTTCTGGACCTGGTCGATCGACATGCTGGGCCACGGCTACACCGACAAG CCCGGCCATCCGCTGGAGGTCCGCCACTACGTCGAGCACCTGATGACCGTGCTGCGCACCATCGGTGTCGAGCGCGCCAG CATCAGCGGCGAATCCCTGGGCGGCTGGGTGGCCGCCCGCGCGGCCATCGACCATCCCGACGTGGTAGACCGGCTGGTCC TCAACACCGCCGGCGGGTCGCAGGCCGATCCCGTTGTGATGCAACGGATTATCGCGCTGTCGATGGCCGCCGCCGAAAAC CCCACCTGGGAGACGGTGCAAGCGCGGATCAAATGGCTGATGGCCGACAAGTCCCGCGACTACGACGACCTGGTCGCCAG CCGCCAGCGCGTCTACCGCCAACCGGGGTTCGTCGCCGCCATGCGCGACATCATGGCGTTGCAGGACCCCGAGATTCGGG CGCGCAACATTCTGGGCCCGGCCGAATACGGCTCGATCATCGCGCCGACCCTGGTGCTGTGGACGAGCGACGACCCGACC GCCGATGTCAGCGAGGGCCGCCGCATCGCGTCGATGATTCCGGGCGCGCGTTTCGAAGTGATGCCCGGCTGCGGTCATTG GCCGCAGTACGAGGACGCCAAGACGTTCAATCGGCTGCATCTCGATTTCCTGCTGGGCCGCTGA
Upstream 100 bases:
>100_bases GCGAAGCTCTATATATAGCGCACGTCACTGTGCGATATTAGCGCACACGTAGGTCGAAAACGAGAACGAGATTTCCCCGA TCTGGAGGCCGGACGGAACC
Downstream 100 bases:
>100_bases TGATCGCGCCGGGGCCACGGGCAACCGACCACGACACCGACGTCCTGGTGGTGGGTGCGGGTCCGGTCGGCCTGACGCTC GCCAATATCCTTGGCCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; HOPDA hydrolase; Meta-cleavage product hydrolase; MCP hydrolase [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAEFESIWSDLQGVAFEQGYLDAGGIRTRYLRAGDPGKPVLVLLHGSGGHAEAYVRNLAAHADHFWTWSIDMLGHGYTDK PGHPLEVRHYVEHLMTVLRTIGVERASISGESLGGWVAARAAIDHPDVVDRLVLNTAGGSQADPVVMQRIIALSMAAAEN PTWETVQARIKWLMADKSRDYDDLVASRQRVYRQPGFVAAMRDIMALQDPEIRARNILGPAEYGSIIAPTLVLWTSDDPT ADVSEGRRIASMIPGARFEVMPGCGHWPQYEDAKTFNRLHLDFLLGR
Sequences:
>Translated_287_residues MAEFESIWSDLQGVAFEQGYLDAGGIRTRYLRAGDPGKPVLVLLHGSGGHAEAYVRNLAAHADHFWTWSIDMLGHGYTDK PGHPLEVRHYVEHLMTVLRTIGVERASISGESLGGWVAARAAIDHPDVVDRLVLNTAGGSQADPVVMQRIIALSMAAAEN PTWETVQARIKWLMADKSRDYDDLVASRQRVYRQPGFVAAMRDIMALQDPEIRARNILGPAEYGSIIAPTLVLWTSDDPT ADVSEGRRIASMIPGARFEVMPGCGHWPQYEDAKTFNRLHLDFLLGR >Mature_286_residues AEFESIWSDLQGVAFEQGYLDAGGIRTRYLRAGDPGKPVLVLLHGSGGHAEAYVRNLAAHADHFWTWSIDMLGHGYTDKP GHPLEVRHYVEHLMTVLRTIGVERASISGESLGGWVAARAAIDHPDVVDRLVLNTAGGSQADPVVMQRIIALSMAAAENP TWETVQARIKWLMADKSRDYDDLVASRQRVYRQPGFVAAMRDIMALQDPEIRARNILGPAEYGSIIAPTLVLWTSDDPTA DVSEGRRIASMIPGARFEVMPGCGHWPQYEDAKTFNRLHLDFLLGR
Specific function: Catalyzes the hydrolysis of a carbon-carbon bond in 4,5- 9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oic acid (4,9-DSHA) to yield 9,17-dioxo-1,2,3,4,10,19- hexanorandrostan-5-oic acid (DOHNAA) and 2-hydroxy-hexa-2,4- dienoic acid (HHD). Al
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. HsaD family [H]
Homologues:
Organism=Escherichia coli, GI87081721, Length=263, Percent_Identity=27.3764258555133, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.7.1.8 [H]
Molecular weight: Translated: 31767; Mature: 31636
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFESIWSDLQGVAFEQGYLDAGGIRTRYLRAGDPGKPVLVLLHGSGGHAEAYVRNLAA CCHHHHHHHHHHCCCHHCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHH HADHFWTWSIDMLGHGYTDKPGHPLEVRHYVEHLMTVLRTIGVERASISGESLGGWVAAR HCCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHH AAIDHPDVVDRLVLNTAGGSQADPVVMQRIIALSMAAAENPTWETVQARIKWLMADKSRD HHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC YDDLVASRQRVYRQPGFVAAMRDIMALQDPEIRARNILGPAEYGSIIAPTLVLWTSDDPT HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHCCCCHHHCCCCCCEEEEECCCCCC ADVSEGRRIASMIPGARFEVMPGCGHWPQYEDAKTFNRLHLDFLLGR CCHHHCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHEEECCC >Mature Secondary Structure AEFESIWSDLQGVAFEQGYLDAGGIRTRYLRAGDPGKPVLVLLHGSGGHAEAYVRNLAA CHHHHHHHHHHCCCHHCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHH HADHFWTWSIDMLGHGYTDKPGHPLEVRHYVEHLMTVLRTIGVERASISGESLGGWVAAR HCCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHH AAIDHPDVVDRLVLNTAGGSQADPVVMQRIIALSMAAAENPTWETVQARIKWLMADKSRD HHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC YDDLVASRQRVYRQPGFVAAMRDIMALQDPEIRARNILGPAEYGSIIAPTLVLWTSDDPT HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHCCCCHHHCCCCCCEEEEECCCCCC ADVSEGRRIASMIPGARFEVMPGCGHWPQYEDAKTFNRLHLDFLLGR CCHHHCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA