| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is narS [H]
Identifier: 41406788
GI number: 41406788
Start: 710109
End: 711398
Strand: Direct
Name: narS [H]
Synonym: MAP0690
Alternate gene names: 41406788
Gene position: 710109-711398 (Clockwise)
Preceding gene: 41406786
Following gene: 41406791
Centisome position: 14.7
GC content: 66.98
Gene sequence:
>1290_bases TTGGGCGCCCCGATGAGTCGTCTTCTCGTTTGCTTGGGGTCGACCGGCGCGGATGAGTACGGTGATCGGGTGGCGGTAGC CGGGGACGCAGAGCTGGAGCGGGTACGCGCGGTTCACCAAATGCGCTCGTACCGAATCGGCTCGGTGCTGCGGGTCGGCG TGGTGGGCCTGATGGTCGCGGCGATGATCATCGGCACCGCCCGATCCGAGTGGCCGCAGGAAAGCGTGTTGATCCTGCTG TACGGAATCATCGCCCTCGGTGCTGTGGCGCTGGCGTTCGCGCCGTTTCGCCGCTGGATCGGGACCGGCAGATTGGCCGG GGTCGGCCGGCTGGAGCCGTTCGCGTTCACGGTCGTCGACATCCTGGCGCTGACGATCTTTCAGCTGCTGTCCACCAACG GGATCTATCCGCTGCTCATCATGGCCATGCTGCCGGTCCTGCTGGGACTGGACGTCTCCTCCCGCCGGGCGGCCGTGGTG CTGATCTTCTCCATGCTCGGGTTCGCGATTGCCGTGCTGCAAGATCCGGTGATGTCGAGCTCGGTGCGCCTGCCGGAAGC GGGTTTTCGGTTCCTGCTCTACGGCTTTCTCTGTTGTGCGGCATTTTTGGTGGTGCGCATCGAGGAGCGTCATACCCGCT CGGTGGCCGGGCTCAGCGCGTTGCGGGAGGAATTGCTCGCCCAGACCATGAACGCGTCGGATGTGTCCCAGCGCAGGATC TCGGAGTTCATTCACGACGGGCCGCTGCAAGACATCCTGGCGGTGCGCCAAGAGCTCGTCGAGCTGGATGCGGCCGTGCC CGATGACGAACATATCGGCCGGGCGCTGGCCGGTCTGCAGCTGGCCTCGGAGCGGTTGCGGCAGGCGACGTTCGAGCTGC ATCCCGCGGTGCTCGAACAGGTCGGGCTGGGTGCTGCCGTGCAGCAGCTGGCCGAATTCACCGCGCAGCGGTCCGGGATC GAAATCTCCACCGACATCGACTATTCGGGGCGCAGCGCCATCGACGCGGTGGTGTTCGGCGTGGTGCGCGAGCTGCTGTC CCACGTCGTGCAGCATTCGCGGGCCCGCACCGCGGCGATCATGCTCGGCCGCACCGACGGGACGTGCGTCCTGCACGTCG TCGACGACGGCGTGGGCTTCAACCAGGAGACGGTGGCGCGCCGCTTGGGCGAGGGGCACATCGGGCTGGCCTCGCATCGC GCCCGGGTGGAGGCCGCCGGGGGAGAGCTGGTATTCCTGGATGTTCCGGTGGGCACGCACGTGTGCGTCGAGGTGCCTCT GAGAAACTAA
Upstream 100 bases:
>100_bases GGGTGATCGTCGGCGACGACCACCCGCACCGTCTCGCGGGTAGCCGGGTCAGCCATGGCCGACAGTGTAGCTCTTTGCCG AACAACGGCGTTCGCCACGA
Downstream 100 bases:
>100_bases CCGCGCCGATCGCTGCTGCGCGTCACATTGGTCACGTCGGCACCAATTTGGCTGCCATGAAGTGAGTTTGGATTGCGCTA GCACCCGCGCTATCGGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MGAPMSRLLVCLGSTGADEYGDRVAVAGDAELERVRAVHQMRSYRIGSVLRVGVVGLMVAAMIIGTARSEWPQESVLILL YGIIALGAVALAFAPFRRWIGTGRLAGVGRLEPFAFTVVDILALTIFQLLSTNGIYPLLIMAMLPVLLGLDVSSRRAAVV LIFSMLGFAIAVLQDPVMSSSVRLPEAGFRFLLYGFLCCAAFLVVRIEERHTRSVAGLSALREELLAQTMNASDVSQRRI SEFIHDGPLQDILAVRQELVELDAAVPDDEHIGRALAGLQLASERLRQATFELHPAVLEQVGLGAAVQQLAEFTAQRSGI EISTDIDYSGRSAIDAVVFGVVRELLSHVVQHSRARTAAIMLGRTDGTCVLHVVDDGVGFNQETVARRLGEGHIGLASHR ARVEAAGGELVFLDVPVGTHVCVEVPLRN
Sequences:
>Translated_429_residues MGAPMSRLLVCLGSTGADEYGDRVAVAGDAELERVRAVHQMRSYRIGSVLRVGVVGLMVAAMIIGTARSEWPQESVLILL YGIIALGAVALAFAPFRRWIGTGRLAGVGRLEPFAFTVVDILALTIFQLLSTNGIYPLLIMAMLPVLLGLDVSSRRAAVV LIFSMLGFAIAVLQDPVMSSSVRLPEAGFRFLLYGFLCCAAFLVVRIEERHTRSVAGLSALREELLAQTMNASDVSQRRI SEFIHDGPLQDILAVRQELVELDAAVPDDEHIGRALAGLQLASERLRQATFELHPAVLEQVGLGAAVQQLAEFTAQRSGI EISTDIDYSGRSAIDAVVFGVVRELLSHVVQHSRARTAAIMLGRTDGTCVLHVVDDGVGFNQETVARRLGEGHIGLASHR ARVEAAGGELVFLDVPVGTHVCVEVPLRN >Mature_428_residues GAPMSRLLVCLGSTGADEYGDRVAVAGDAELERVRAVHQMRSYRIGSVLRVGVVGLMVAAMIIGTARSEWPQESVLILLY GIIALGAVALAFAPFRRWIGTGRLAGVGRLEPFAFTVVDILALTIFQLLSTNGIYPLLIMAMLPVLLGLDVSSRRAAVVL IFSMLGFAIAVLQDPVMSSSVRLPEAGFRFLLYGFLCCAAFLVVRIEERHTRSVAGLSALREELLAQTMNASDVSQRRIS EFIHDGPLQDILAVRQELVELDAAVPDDEHIGRALAGLQLASERLRQATFELHPAVLEQVGLGAAVQQLAEFTAQRSGIE ISTDIDYSGRSAIDAVVFGVVRELLSHVVQHSRARTAAIMLGRTDGTCVLHVVDDGVGFNQETVARRLGEGHIGLASHRA RVEAAGGELVFLDVPVGTHVCVEVPLRN
Specific function: Probable member of the two-component regulatory system NarS/NarL. May activate NarL by phosphorylation [H]
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 46172; Mature: 46041
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPMSRLLVCLGSTGADEYGDRVAVAGDAELERVRAVHQMRSYRIGSVLRVGVVGLMVA CCCCHHHHHHHHCCCCCCHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMIIGTARSEWPQESVLILLYGIIALGAVALAFAPFRRWIGTGRLAGVGRLEPFAFTVVD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ILALTIFQLLSTNGIYPLLIMAMLPVLLGLDVSSRRAAVVLIFSMLGFAIAVLQDPVMSS HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHC SVRLPEAGFRFLLYGFLCCAAFLVVRIEERHTRSVAGLSALREELLAQTMNASDVSQRRI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SEFIHDGPLQDILAVRQELVELDAAVPDDEHIGRALAGLQLASERLRQATFELHPAVLEQ HHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH VGLGAAVQQLAEFTAQRSGIEISTDIDYSGRSAIDAVVFGVVRELLSHVVQHSRARTAAI HCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE MLGRTDGTCVLHVVDDGVGFNQETVARRLGEGHIGLASHRARVEAAGGELVFLDVPVGTH EEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHEECCCEEEEEECCCCCE VCVEVPLRN EEEEECCCC >Mature Secondary Structure GAPMSRLLVCLGSTGADEYGDRVAVAGDAELERVRAVHQMRSYRIGSVLRVGVVGLMVA CCCHHHHHHHHCCCCCCHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMIIGTARSEWPQESVLILLYGIIALGAVALAFAPFRRWIGTGRLAGVGRLEPFAFTVVD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ILALTIFQLLSTNGIYPLLIMAMLPVLLGLDVSSRRAAVVLIFSMLGFAIAVLQDPVMSS HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHC SVRLPEAGFRFLLYGFLCCAAFLVVRIEERHTRSVAGLSALREELLAQTMNASDVSQRRI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SEFIHDGPLQDILAVRQELVELDAAVPDDEHIGRALAGLQLASERLRQATFELHPAVLEQ HHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH VGLGAAVQQLAEFTAQRSGIEISTDIDYSGRSAIDAVVFGVVRELLSHVVQHSRARTAAI HCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE MLGRTDGTCVLHVVDDGVGFNQETVARRLGEGHIGLASHRARVEAAGGELVFLDVPVGTH EEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHEECCCEEEEEECCCCCE VCVEVPLRN EEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]