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The map label for this gene is panD

Identifier: 41406555

GI number: 41406555

Start: 484683

End: 485114

Strand: Direct

Name: panD

Synonym: MAP0457

Alternate gene names: 41406555

Gene position: 484683-485114 (Clockwise)

Preceding gene: 41406554

Following gene: 41406556

Centisome position: 10.04

GC content: 66.2

Gene sequence:

>432_bases
ATGTTACGGACGATGCTCAAGTCGAAGATCCACCGGGCCACCGTCACGCAGGCCGACCTGCACTACGTGGGCTCGGTGAC
CATCGACGCCGACCTGATGGACGCCGCCGACCTGCTCGAGGGCGAACAGGTGACCATCGTCGACATCGACAACGGCGCCC
GGCTGGTCACCTACGCGATCACCGGTGAGCGTGGCAGCGGGGTGATCGGGATCAACGGTGCCGCAGCGCATCTGGTCCAC
CCGGGCGATCTGGTCATCCTGATCGCGTATGGGACCATGGAGGAGGCCGAGGCGCGGGCGTATCAGCCGCGAATCGTCTT
CGTCGACGCCGACAACAAGCCGGTCGACCTCGGCCACGATCCGGCATTCGTGCCGGACTTCGAGATAGCAGGGGCGGCCG
AGCTGCTCGATCCCCGGATCGTTGCGCGGTAG

Upstream 100 bases:

>100_bases
CCCGACTGCTGGATAACATCGAAATGCAGATCGAAACACCCGCCGGCACCGCTGGGCCGGACGGCGACCGCCAATACGCC
CAATCACCTTGGAGGAATTG

Downstream 100 bases:

>100_bases
CCGTGCTGCTGGCCATCGACGTCCGTAACACCCACACCGTCGTCGGGCTGATATCCGGCTCCAAAGAGCACGCAAAAGTG
GTGCAGCAGTGGCGGATTCG

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MLRTMLKSKIHRATVTQADLHYVGSVTIDADLMDAADLLEGEQVTIVDIDNGARLVTYAITGERGSGVIGINGAAAHLVH
PGDLVILIAYGTMEEAEARAYQPRIVFVDADNKPVDLGHDPAFVPDFEIAGAAELLDPRIVAR

Sequences:

>Translated_143_residues
MLRTMLKSKIHRATVTQADLHYVGSVTIDADLMDAADLLEGEQVTIVDIDNGARLVTYAITGERGSGVIGINGAAAHLVH
PGDLVILIAYGTMEEAEARAYQPRIVFVDADNKPVDLGHDPAFVPDFEIAGAAELLDPRIVAR
>Mature_143_residues
MLRTMLKSKIHRATVTQADLHYVGSVTIDADLMDAADLLEGEQVTIVDIDNGARLVTYAITGERGSGVIGINGAAAHLVH
PGDLVILIAYGTMEEAEARAYQPRIVFVDADNKPVDLGHDPAFVPDFEIAGAAELLDPRIVAR

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=113, Percent_Identity=50.4424778761062, Blast_Score=127, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_MYCA1 (A0QA94)

Other databases:

- EMBL:   CP000479
- RefSeq:   YP_879832.1
- ProteinModelPortal:   A0QA94
- SMR:   A0QA94
- STRING:   A0QA94
- EnsemblBacteria:   EBMYCT00000009705
- GeneID:   4530264
- GenomeReviews:   CP000479_GR
- KEGG:   mav:MAV_0552
- TIGR:   MAV_0552
- eggNOG:   COG0853
- GeneTree:   EBGT00050000017253
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- PhylomeDB:   A0QA94
- ProtClustDB:   PRK05449
- BioCyc:   MAVI243243:MAV_0552-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 15304; Mature: 15304

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTMLKSKIHRATVTQADLHYVGSVTIDADLMDAADLLEGEQVTIVDIDNGARLVTYAI
CCHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHCHHHHCCCCEEEEEEECCCCEEEEEEE
TGERGSGVIGINGAAAHLVHPGDLVILIAYGTMEEAEARAYQPRIVFVDADNKPVDLGHD
ECCCCCEEEEECCCEEEEECCCCEEEEEEECCCCCCHHHCCCCEEEEEECCCCCEECCCC
PAFVPDFEIAGAAELLDPRIVAR
CCCCCCCCCCCHHHHCCCEEECC
>Mature Secondary Structure
MLRTMLKSKIHRATVTQADLHYVGSVTIDADLMDAADLLEGEQVTIVDIDNGARLVTYAI
CCHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHCHHHHCCCCEEEEEEECCCCEEEEEEE
TGERGSGVIGINGAAAHLVHPGDLVILIAYGTMEEAEARAYQPRIVFVDADNKPVDLGHD
ECCCCCEEEEECCCEEEEECCCCEEEEEEECCCCCCHHHCCCCEEEEEECCCCCEECCCC
PAFVPDFEIAGAAELLDPRIVAR
CCCCCCCCCCCHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA