| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is folE
Identifier: 41406547
GI number: 41406547
Start: 478293
End: 478907
Strand: Direct
Name: folE
Synonym: MAP0449
Alternate gene names: 41406547
Gene position: 478293-478907 (Clockwise)
Preceding gene: 41406546
Following gene: 41406548
Centisome position: 9.9
GC content: 68.29
Gene sequence:
>615_bases ATGGCCGGGAACGGTTCAGCGCCGGACACCGCGACGCACCAGGTCCGGCAGTTCGACCAGGCGCGCGCCGAGGCCGCCGT CCGCGAGTTGCTGTTCGCCATCGGCGAGGACCCCGACCGGCACGGCCTGGCCGAAACCCCGGCCCGCGTCGCCCGCGCCT ACCGGGAGATGTTCGCCGGCCTGTACACCGACCCGGACAGCGTGCTGAACACCATGTTCGACGAGGAACACGACGAACTG GTGCTGGTCAAGGAGATCCCGCTGTACTCCACCTGCGAGCACCACCTGGTGTCGTTTCACGGGGTGGCCCATGTCGGTTA CATCCCCGGCAACGACGGCCGGGTCACCGGCCTGTCCAAGATCGCCCGCCTGGTCGACCTGTACGCCAAGCGGCCCCAGG TGCAGGAGCGGCTGACCAGTCAGATCGCCGACGCCCTGGTGAAAAAGCTCAATCCGCGCGGGGTGATCGTGGTGGTCGAG GCCGAGCATCTGTGCATGGCGATGCGCGGTGTCCGCAAACCCGGTGCCGTCACCACGACGTCGGCGGTGCGCGGGCTGTT CAAGACCAACGCGGCTTCTCGGGCGGAGGCGCTCGACCTGATCCTGCGTAAGTGA
Upstream 100 bases:
>100_bases CCCGGTCAGCCCGCCCCCGAGGGTGGGTCGCCGGACCGGCAGGATGACGACGTGAGCCGGTCCAACCCGCCGGCCCACGG CTGAGCAAACGGAGGATGTG
Downstream 100 bases:
>100_bases GTCCGGCGCCTTGCAGGTAATGGGAGTCTTGAACGTCACTGACGATTCGTTCTCCGACGGTGGCCGCTACCTCGACCCCG ACAAGGCCGTCGCACACGGA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MAGNGSAPDTATHQVRQFDQARAEAAVRELLFAIGEDPDRHGLAETPARVARAYREMFAGLYTDPDSVLNTMFDEEHDEL VLVKEIPLYSTCEHHLVSFHGVAHVGYIPGNDGRVTGLSKIARLVDLYAKRPQVQERLTSQIADALVKKLNPRGVIVVVE AEHLCMAMRGVRKPGAVTTTSAVRGLFKTNAASRAEALDLILRK
Sequences:
>Translated_204_residues MAGNGSAPDTATHQVRQFDQARAEAAVRELLFAIGEDPDRHGLAETPARVARAYREMFAGLYTDPDSVLNTMFDEEHDEL VLVKEIPLYSTCEHHLVSFHGVAHVGYIPGNDGRVTGLSKIARLVDLYAKRPQVQERLTSQIADALVKKLNPRGVIVVVE AEHLCMAMRGVRKPGAVTTTSAVRGLFKTNAASRAEALDLILRK >Mature_203_residues AGNGSAPDTATHQVRQFDQARAEAAVRELLFAIGEDPDRHGLAETPARVARAYREMFAGLYTDPDSVLNTMFDEEHDELV LVKEIPLYSTCEHHLVSFHGVAHVGYIPGNDGRVTGLSKIARLVDLYAKRPQVQERLTSQIADALVKKLNPRGVIVVVEA EHLCMAMRGVRKPGAVTTTSAVRGLFKTNAASRAEALDLILRK
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=178, Percent_Identity=50, Blast_Score=174, Evalue=7e-44, Organism=Homo sapiens, GI4503949, Length=178, Percent_Identity=50, Blast_Score=174, Evalue=7e-44, Organism=Homo sapiens, GI66932970, Length=138, Percent_Identity=51.4492753623188, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI66932972, Length=138, Percent_Identity=51.4492753623188, Blast_Score=136, Evalue=1e-32, Organism=Escherichia coli, GI1788476, Length=172, Percent_Identity=43.0232558139535, Blast_Score=119, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17560486, Length=180, Percent_Identity=48.8888888888889, Blast_Score=182, Evalue=9e-47, Organism=Saccharomyces cerevisiae, GI6321706, Length=185, Percent_Identity=48.1081081081081, Blast_Score=171, Evalue=6e-44, Organism=Drosophila melanogaster, GI24656796, Length=223, Percent_Identity=43.0493273542601, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI24656782, Length=187, Percent_Identity=47.5935828877005, Blast_Score=163, Evalue=9e-41, Organism=Drosophila melanogaster, GI24656791, Length=187, Percent_Identity=47.5935828877005, Blast_Score=162, Evalue=2e-40,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 22354; Mature: 22223
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNGSAPDTATHQVRQFDQARAEAAVRELLFAIGEDPDRHGLAETPARVARAYREMFAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH LYTDPDSVLNTMFDEEHDELVLVKEIPLYSTCEHHLVSFHGVAHVGYIPGNDGRVTGLSK CCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCHHEEEEECCCCCCCHHHHH IARLVDLYAKRPQVQERLTSQIADALVKKLNPRGVIVVVEAEHLCMAMRGVRKPGAVTTT HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCCHHH SAVRGLFKTNAASRAEALDLILRK HHHHHHHHHCHHHHHHHHHHHHCC >Mature Secondary Structure AGNGSAPDTATHQVRQFDQARAEAAVRELLFAIGEDPDRHGLAETPARVARAYREMFAG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH LYTDPDSVLNTMFDEEHDELVLVKEIPLYSTCEHHLVSFHGVAHVGYIPGNDGRVTGLSK CCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCHHEEEEECCCCCCCHHHHH IARLVDLYAKRPQVQERLTSQIADALVKKLNPRGVIVVVEAEHLCMAMRGVRKPGAVTTT HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCCHHH SAVRGLFKTNAASRAEALDLILRK HHHHHHHHHCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA