| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406487
Identifier: 41406487
GI number: 41406487
Start: 411992
End: 413005
Strand: Direct
Name: 41406487
Synonym: MAP0389
Alternate gene names: NA
Gene position: 411992-413005 (Clockwise)
Preceding gene: 41406486
Following gene: 41406491
Centisome position: 8.53
GC content: 67.55
Gene sequence:
>1014_bases ATGAGCACCCGGCCGCCCGCGCGCACCTACAACCAAGCTCACCGGGTGCGCCCGCACACCGGCGGACGGCGGATCAGCAT CTACTGGACGTGGAGCTATCCGTGGGAATCGCAGCGCGACATTCAGACCCTGGACAACCGCTTCTCCACCATGACCGAAG TGCGCAGGGCGGCCTGGCCCCGATACGAGGGGCCCGACTGGGACGACGCCCACTTTCTGCAGGGCATCGCCGGCACCTTG GAGCTTTTCCACCGCTCGACGCTTGCGTTCCAGGAGCTGGCCGGCGAAGCAACCGGTCAGCAGGTGGCGGTGTTCCAGCG CGTCGACCAGGCCGGCTACCGGCTGGTGATCGACGAGCGGATATTGGCCGACACCGACACCCTGATGGTGTTCGGGCTGG ACCATCTCGCCGGGGAAGACGAGGCCGAGCCCGGGGAGATCTCGGCCATCCGTGCCTGGCTGGAACGCGAGGGCACCTGC CTGCTGCTGGCCCCGCACCACGACGTCGGCGGCACCGACGACATGGCCCAGCGGCAGGTCGAATACCTGCACCACGGGGA TCCGCTCGTGCCGCGGCAACAACGGTTTTCCGCCTACACCCGCTCGCTGATGAAGGGGCTCGACGTTCCCGTCCGCAACA GGTGGGGCCTGCATCCGGCCCGGGTGGCCGCGACCGGTCAGATGGCACCGCTGACCTGCTTTCGCGACCTGGACGCGCCC GGGCTGCTGGACGATGTCACGACGCTGAACTTTCACCCGCATCTGCCGCACTACGAGCTCACCGCCCCGGAAAGCGACGG GCTACGGGTGCTGGCCACCCAACGCGTCGACCCGGCCCGGCCCCATCCCTTTACCGAGGCGGGCAACAGCGAATTCAACG CGTTGATCTGGATGCCGCCGCACGCCGAACGAGCCGGTGACATCGTGCTCGTCGACTCGACCAACTTCACGACGCTGTTC GGCGGGTCCGACAGCCTCAGAAACTTCTGGCACAACCTGGCCACGATGAGGTGA
Upstream 100 bases:
>100_bases TCAAGGGACTGCCGGCGTTCACGACGCTGACCGGTGGGGCGTACTTCTTCCTTCCGGGCATCAACGCCATGCGATACCTC GCGGCGCTCGGCGAACGGTC
Downstream 100 bases:
>100_bases AGGACCCGCCGCTCACACGAGTCGGGGTGGCGGGATTTGAACCCACGGCCTCTTCGTCCCGAACGAAGCGCGCTACCAAG CTGCGCCACACCCCGCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSTRPPARTYNQAHRVRPHTGGRRISIYWTWSYPWESQRDIQTLDNRFSTMTEVRRAAWPRYEGPDWDDAHFLQGIAGTL ELFHRSTLAFQELAGEATGQQVAVFQRVDQAGYRLVIDERILADTDTLMVFGLDHLAGEDEAEPGEISAIRAWLEREGTC LLLAPHHDVGGTDDMAQRQVEYLHHGDPLVPRQQRFSAYTRSLMKGLDVPVRNRWGLHPARVAATGQMAPLTCFRDLDAP GLLDDVTTLNFHPHLPHYELTAPESDGLRVLATQRVDPARPHPFTEAGNSEFNALIWMPPHAERAGDIVLVDSTNFTTLF GGSDSLRNFWHNLATMR
Sequences:
>Translated_337_residues MSTRPPARTYNQAHRVRPHTGGRRISIYWTWSYPWESQRDIQTLDNRFSTMTEVRRAAWPRYEGPDWDDAHFLQGIAGTL ELFHRSTLAFQELAGEATGQQVAVFQRVDQAGYRLVIDERILADTDTLMVFGLDHLAGEDEAEPGEISAIRAWLEREGTC LLLAPHHDVGGTDDMAQRQVEYLHHGDPLVPRQQRFSAYTRSLMKGLDVPVRNRWGLHPARVAATGQMAPLTCFRDLDAP GLLDDVTTLNFHPHLPHYELTAPESDGLRVLATQRVDPARPHPFTEAGNSEFNALIWMPPHAERAGDIVLVDSTNFTTLF GGSDSLRNFWHNLATMR >Mature_336_residues STRPPARTYNQAHRVRPHTGGRRISIYWTWSYPWESQRDIQTLDNRFSTMTEVRRAAWPRYEGPDWDDAHFLQGIAGTLE LFHRSTLAFQELAGEATGQQVAVFQRVDQAGYRLVIDERILADTDTLMVFGLDHLAGEDEAEPGEISAIRAWLEREGTCL LLAPHHDVGGTDDMAQRQVEYLHHGDPLVPRQQRFSAYTRSLMKGLDVPVRNRWGLHPARVAATGQMAPLTCFRDLDAPG LLDDVTTLNFHPHLPHYELTAPESDGLRVLATQRVDPARPHPFTEAGNSEFNALIWMPPHAERAGDIVLVDSTNFTTLFG GSDSLRNFWHNLATMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38151; Mature: 38020
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRPPARTYNQAHRVRPHTGGRRISIYWTWSYPWESQRDIQTLDNRFSTMTEVRRAAWP CCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC RYEGPDWDDAHFLQGIAGTLELFHRSTLAFQELAGEATGQQVAVFQRVDQAGYRLVIDER CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECE ILADTDTLMVFGLDHLAGEDEAEPGEISAIRAWLEREGTCLLLAPHHDVGGTDDMAQRQV ECCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHH EYLHHGDPLVPRQQRFSAYTRSLMKGLDVPVRNRWGLHPARVAATGQMAPLTCFRDLDAP HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCHHHHHHCCCCC GLLDDVTTLNFHPHLPHYELTAPESDGLRVLATQRVDPARPHPFTEAGNSEFNALIWMPP CCHHCCEEEECCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECC HAERAGDIVLVDSTNFTTLFGGSDSLRNFWHNLATMR CCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure STRPPARTYNQAHRVRPHTGGRRISIYWTWSYPWESQRDIQTLDNRFSTMTEVRRAAWP CCCCCCHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC RYEGPDWDDAHFLQGIAGTLELFHRSTLAFQELAGEATGQQVAVFQRVDQAGYRLVIDER CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECE ILADTDTLMVFGLDHLAGEDEAEPGEISAIRAWLEREGTCLLLAPHHDVGGTDDMAQRQV ECCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHH EYLHHGDPLVPRQQRFSAYTRSLMKGLDVPVRNRWGLHPARVAATGQMAPLTCFRDLDAP HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCHHHHHHCCCCC GLLDDVTTLNFHPHLPHYELTAPESDGLRVLATQRVDPARPHPFTEAGNSEFNALIWMPP CCHHCCEEEECCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECC HAERAGDIVLVDSTNFTTLFGGSDSLRNFWHNLATMR CCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA