| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406486
Identifier: 41406486
GI number: 41406486
Start: 410799
End: 411995
Strand: Direct
Name: 41406486
Synonym: MAP0388
Alternate gene names: NA
Gene position: 410799-411995 (Clockwise)
Preceding gene: 41406485
Following gene: 41406487
Centisome position: 8.51
GC content: 65.91
Gene sequence:
>1197_bases GTGCAGTCCGCGGCGTCGGTACGCGACACCATGGACAGCGCCAAGCGATGGGTCACGCTGGGTTTCACCTGGAACGGCTT GCGGGCGCTCGGGGTTCCCGGGGACGCCCTTGCCAGCTTTCCGGAAGAGTTCCGCCAGGGCATGGCCGCCCGGGCGGACA TTCTCGGGGACACCGGACGCAATCATCCCGACAACTGGGTGGGCGGATTGGCCGGCGCGGACCTGCACGCGATCGCGATT CTGTTCGCGCGAGACGACGCCGAACATGCCCGCGCCACCAACGCCCACGACGACCTGCTGAAAAGGTGCCAAGGTGTGCG CAGGTTGTCACACCTCGACCTGAACGCAACGCCTCCGTTCAACTACGCCCACGACCACTTCGGCTTCCGGGATCGCTTGT CGCAGCCGGTGATCGAAGGATCCGGCGAGGAACCCACCCCCGGCTCGGGCGCGCCGCTCAAGGCCGGGGAATTCATCCTC GGCTATCCCGATGAAGTCGGCCCGGTGGCCAATCAGCCCGAGCCGGAGGTGCTGTCGCGCAACGGAACATATGCGGCGTA CCGCCGGCTGCGCGAACACGTGGCCGTCTTCCGCGACTACCTCCGTTCCGTGGCCGGCGCGGATCGGCAGGAGGAGTTGT TGGCGGCAAAACTCATGGGCCGCTGGCGTAGCGGTGCCCCGTTGGTGCTCGCCCCCGACGAAGACGATCCCGAGTTGGGC GCAGATCCGCTGCGCAACAACGACTTCAACTACAAGGAGATGGACCCCTTCGGCTACGCATGCCCGCTGGGCGCCCACGC CAGACGGCTCAACCCGCGAGACACCGCGCACAACATGAACCGGCGCCGGATGATTCGTCGTGGGGCGACCTATGGTCCGG CGCTTCCCGAAGGCGCTCCCGACGACGGCGAGGATCGTGGCATCGCCGCGTTCATTATCTGCGCCAGCCTGATCCGGCAG TTCGAATTCGCGCAGAACGTCTGGATAAACGACCGCACTTTCCACGAACTCGGCAACGAGCACGACCCGATCTGTGGAAC CCAGGACGGCACACTGGATTTCACCATACCGAAGCGACCGATTCGCCGGGTGCTCAAGGGACTGCCGGCGTTCACGACGC TGACCGGTGGGGCGTACTTCTTCCTTCCGGGCATCAACGCCATGCGATACCTCGCGGCGCTCGGCGAACGGTCATGA
Upstream 100 bases:
>100_bases CCTGCTGACCCGAACCCCGGCGCTGACCGGACGCTACGAGTTTCTCTCGTTCGACGATGCAACCGCCGGGCGGGCGTGGC TGTCCGCCCTCGTCGATGTC
Downstream 100 bases:
>100_bases GCACCCGGCCGCCCGCGCGCACCTACAACCAAGCTCACCGGGTGCGCCCGCACACCGGCGGACGGCGGATCAGCATCTAC TGGACGTGGAGCTATCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Dyp-Type Peroxidase Family Protein; Dyp-Type Peroxidase Family; Cytochrome; Dyp-Type Peroxidase; Peroxidase Protein; Peroxidase Family Protein; Iron-Dependent Peroxidase-Like Protein; Iron-Dependent Peroxidase; Peroxidase-Like Protein
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MQSAASVRDTMDSAKRWVTLGFTWNGLRALGVPGDALASFPEEFRQGMAARADILGDTGRNHPDNWVGGLAGADLHAIAI LFARDDAEHARATNAHDDLLKRCQGVRRLSHLDLNATPPFNYAHDHFGFRDRLSQPVIEGSGEEPTPGSGAPLKAGEFIL GYPDEVGPVANQPEPEVLSRNGTYAAYRRLREHVAVFRDYLRSVAGADRQEELLAAKLMGRWRSGAPLVLAPDEDDPELG ADPLRNNDFNYKEMDPFGYACPLGAHARRLNPRDTAHNMNRRRMIRRGATYGPALPEGAPDDGEDRGIAAFIICASLIRQ FEFAQNVWINDRTFHELGNEHDPICGTQDGTLDFTIPKRPIRRVLKGLPAFTTLTGGAYFFLPGINAMRYLAALGERS
Sequences:
>Translated_398_residues MQSAASVRDTMDSAKRWVTLGFTWNGLRALGVPGDALASFPEEFRQGMAARADILGDTGRNHPDNWVGGLAGADLHAIAI LFARDDAEHARATNAHDDLLKRCQGVRRLSHLDLNATPPFNYAHDHFGFRDRLSQPVIEGSGEEPTPGSGAPLKAGEFIL GYPDEVGPVANQPEPEVLSRNGTYAAYRRLREHVAVFRDYLRSVAGADRQEELLAAKLMGRWRSGAPLVLAPDEDDPELG ADPLRNNDFNYKEMDPFGYACPLGAHARRLNPRDTAHNMNRRRMIRRGATYGPALPEGAPDDGEDRGIAAFIICASLIRQ FEFAQNVWINDRTFHELGNEHDPICGTQDGTLDFTIPKRPIRRVLKGLPAFTTLTGGAYFFLPGINAMRYLAALGERS >Mature_398_residues MQSAASVRDTMDSAKRWVTLGFTWNGLRALGVPGDALASFPEEFRQGMAARADILGDTGRNHPDNWVGGLAGADLHAIAI LFARDDAEHARATNAHDDLLKRCQGVRRLSHLDLNATPPFNYAHDHFGFRDRLSQPVIEGSGEEPTPGSGAPLKAGEFIL GYPDEVGPVANQPEPEVLSRNGTYAAYRRLREHVAVFRDYLRSVAGADRQEELLAAKLMGRWRSGAPLVLAPDEDDPELG ADPLRNNDFNYKEMDPFGYACPLGAHARRLNPRDTAHNMNRRRMIRRGATYGPALPEGAPDDGEDRGIAAFIICASLIRQ FEFAQNVWINDRTFHELGNEHDPICGTQDGTLDFTIPKRPIRRVLKGLPAFTTLTGGAYFFLPGINAMRYLAALGERS
Specific function: Unknown
COG id: COG2837
COG function: function code P; Predicted iron-dependent peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43852; Mature: 43852
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSAASVRDTMDSAKRWVTLGFTWNGLRALGVPGDALASFPEEFRQGMAARADILGDTGR CCCHHHHHHHHHHHHHEEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC NHPDNWVGGLAGADLHAIAILFARDDAEHARATNAHDDLLKRCQGVRRLSHLDLNATPPF CCCCHHHCCCCCCCHHHEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC NYAHDHFGFRDRLSQPVIEGSGEEPTPGSGAPLKAGEFILGYPDEVGPVANQPEPEVLSR CCCHHCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEECCHHCCCCCCCCCHHHHCC NGTYAAYRRLREHVAVFRDYLRSVAGADRQEELLAAKLMGRWRSGAPLVLAPDEDDPELG CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC ADPLRNNDFNYKEMDPFGYACPLGAHARRLNPRDTAHNMNRRRMIRRGATYGPALPEGAP CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC DDGEDRGIAAFIICASLIRQFEFAQNVWINDRTFHELGNEHDPICGTQDGTLDFTIPKRP CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCHHH IRRVLKGLPAFTTLTGGAYFFLPGINAMRYLAALGERS HHHHHHCCCCHHHHCCCEEEEECCHHHHHHHHHHCCCC >Mature Secondary Structure MQSAASVRDTMDSAKRWVTLGFTWNGLRALGVPGDALASFPEEFRQGMAARADILGDTGR CCCHHHHHHHHHHHHHEEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC NHPDNWVGGLAGADLHAIAILFARDDAEHARATNAHDDLLKRCQGVRRLSHLDLNATPPF CCCCHHHCCCCCCCHHHEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC NYAHDHFGFRDRLSQPVIEGSGEEPTPGSGAPLKAGEFILGYPDEVGPVANQPEPEVLSR CCCHHCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEECCHHCCCCCCCCCHHHHCC NGTYAAYRRLREHVAVFRDYLRSVAGADRQEELLAAKLMGRWRSGAPLVLAPDEDDPELG CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC ADPLRNNDFNYKEMDPFGYACPLGAHARRLNPRDTAHNMNRRRMIRRGATYGPALPEGAP CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC DDGEDRGIAAFIICASLIRQFEFAQNVWINDRTFHELGNEHDPICGTQDGTLDFTIPKRP CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCHHH IRRVLKGLPAFTTLTGGAYFFLPGINAMRYLAALGERS HHHHHHCCCCHHHHCCCEEEEECCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA