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The map label for this gene is ykoG [H]

Identifier: 41406357

GI number: 41406357

Start: 278431

End: 279171

Strand: Direct

Name: ykoG [H]

Synonym: MAP0259

Alternate gene names: 41406357

Gene position: 278431-279171 (Clockwise)

Preceding gene: 41406356

Following gene: 41406358

Centisome position: 5.76

GC content: 66.94

Gene sequence:

>741_bases
GTGAGCCAGCCGCGAGCCTCAGCCGAGCGGGTCGTCATGTGCCGCGCCGACGGCAACCCGATCAACGTCCTGGTCGTCGA
CGACGAAGCCGTGCTGGCCGAAATGGTGTCGATGGCGCTGCGCTACGAGGGCTGGAACATCGCCACCGCCAGCGACGGCG
CCTCGGCCATCGCCGCCGCGCGCAACCAGCGGCCCGACGTGGTGGTCCTCGACGTGATGCTGCCCGACATGAGCGGGCTG
GACGTGCTGCACAAGCTGCGGGAGGAGAACCCCCAGCTGCCGGTGCTGTTGCTGACCGCCAAAGACGCGGTGGAGGACCG
GATCGCGGGTCTGACCGCCGGCGGCGACGACTACGTCACCAAACCGTTCAGCATCGAAGAGGTGGTGCTTCGGTTGCGGG
CCCTGCTGCGGCGCACCGGCGTGACGACCGTGGACAGCGGCGCGCAGCTGGTGGTCGGCGACCTGGTGCTCGACGAGGAC
AGCCACGAGGTCACCCGCGCCGGCGAGCCGATCTCGTTGACATCCACCGAGTTCGAGCTGTTGCGGTTCATGATGCGCAA
CTCCAAGCGGGTGCTGAGCAAGGCTCAGATCCTGGACCGGGTGTGGAGCTACGACTTCGGCGGCCGATCCAACATCGTCG
AGCTCTACATTTCCTATCTGCGTAAGAAGATCGACAACGGTCGGGAGCCGATGATCCACACCCTGCGCGGCGCGGGTTAT
GTCCTCAAGCCCGCTCGCTAG

Upstream 100 bases:

>100_bases
TCGCCGGCCGGCGCTACTGGTACTGACCGGCCGGCCGGTTCACAGGCCACGCAAAGGTAGGGCATAGCCGCAGCTCAGCC
CGCAGCGGATACTGGGACAT

Downstream 100 bases:

>100_bases
GAGCGATCGCAAGCGCGGCGAAGCCGGGCGCAGCGGGTCGCGACCATTGGCTAGGAGCGATCGCAAGCGCGGCGAAGCCG
GGCGCGGCGGGTCGCGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSQPRASAERVVMCRADGNPINVLVVDDEAVLAEMVSMALRYEGWNIATASDGASAIAAARNQRPDVVVLDVMLPDMSGL
DVLHKLREENPQLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRLRALLRRTGVTTVDSGAQLVVGDLVLDED
SHEVTRAGEPISLTSTEFELLRFMMRNSKRVLSKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGY
VLKPAR

Sequences:

>Translated_246_residues
MSQPRASAERVVMCRADGNPINVLVVDDEAVLAEMVSMALRYEGWNIATASDGASAIAAARNQRPDVVVLDVMLPDMSGL
DVLHKLREENPQLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRLRALLRRTGVTTVDSGAQLVVGDLVLDED
SHEVTRAGEPISLTSTEFELLRFMMRNSKRVLSKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGY
VLKPAR
>Mature_245_residues
SQPRASAERVVMCRADGNPINVLVVDDEAVLAEMVSMALRYEGWNIATASDGASAIAAARNQRPDVVVLDVMLPDMSGLD
VLHKLREENPQLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRLRALLRRTGVTTVDSGAQLVVGDLVLDEDS
HEVTRAGEPISLTSTEFELLRFMMRNSKRVLSKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYV
LKPAR

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=39.7321428571429, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1786599, Length=221, Percent_Identity=38.9140271493213, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=36.4864864864865, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=37.5, Blast_Score=141, Evalue=3e-35,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=34.841628959276, Blast_Score=134, Evalue=4e-33,
Organism=Escherichia coli, GI1790552, Length=223, Percent_Identity=34.9775784753363, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=33.9366515837104, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1787375, Length=227, Percent_Identity=32.5991189427313, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=35.2173913043478, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=29.6943231441048, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=29.646017699115, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1787229, Length=234, Percent_Identity=31.6239316239316, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=29.0748898678414, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=29.4871794871795, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=36.1111111111111, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790437, Length=119, Percent_Identity=34.453781512605, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790299, Length=107, Percent_Identity=33.6448598130841, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1788713, Length=115, Percent_Identity=29.5652173913043, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788521, Length=120, Percent_Identity=35, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788905, Length=103, Percent_Identity=29.126213592233, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI1788191, Length=124, Percent_Identity=31.4516129032258, Blast_Score=60, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=121, Percent_Identity=29.7520661157025, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27149; Mature: 27017

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPRASAERVVMCRADGNPINVLVVDDEAVLAEMVSMALRYEGWNIATASDGASAIAAA
CCCCCCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
RNQRPDVVVLDVMLPDMSGLDVLHKLREENPQLPVLLLTAKDAVEDRIAGLTAGGDDYVT
HCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCC
KPFSIEEVVLRLRALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVTRAGEPISLTSTEFEL
CCCCHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEEECCCCCHHHHCCCCEEECHHHHHH
LRFMMRNSKRVLSKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCE
VLKPAR
EECCCC
>Mature Secondary Structure 
SQPRASAERVVMCRADGNPINVLVVDDEAVLAEMVSMALRYEGWNIATASDGASAIAAA
CCCCCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
RNQRPDVVVLDVMLPDMSGLDVLHKLREENPQLPVLLLTAKDAVEDRIAGLTAGGDDYVT
HCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCC
KPFSIEEVVLRLRALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVTRAGEPISLTSTEFEL
CCCCHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEEECCCCCHHHHCCCCEEECHHHHHH
LRFMMRNSKRVLSKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCE
VLKPAR
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]