| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406311
Identifier: 41406311
GI number: 41406311
Start: 219259
End: 219759
Strand: Direct
Name: 41406311
Synonym: MAP0213
Alternate gene names: NA
Gene position: 219259-219759 (Clockwise)
Preceding gene: 41406310
Following gene: 41406312
Centisome position: 4.54
GC content: 75.05
Gene sequence:
>501_bases GTGGCCGCGCTCGTCGCCGTCCAGGCGGCACTGAGCAAGCGCCCCGGGGTGCTGACCGTGGCGCGCGCGCTGTCCCACTT CGGCGAGCACAGCATCGGCTGGGTGGCGGCGGCCGCGCTCGGCGCGCTGTGCTCACCGCGGCGCCGCGCCGATTGGCTTG CGGCCGGGGCCGGGGCGTTCGTCGCGCACGCTGCTGCCGTCGTCGTCAAGCGCATCGTGCGGCGCGAACGGCCGCATCAT CCCGCCGTCGTGGTCAATGTCGGCACCCCCAGCCGGCTCAGTTTCCCGTCCGCGCATGCCACCTCCACCACCGCCGCAGC GATCCTGCTGGGCCGGATCACCGGCCTGCCGCTGCCCGCGGTCCTGGTGCCGCCGATGGCGTTGTCCCGGATGGTGCTGG GGGTGCACTATCCCAGCGACGTGGCCTGCGGCATCGCCCTGGGGGCCGGCGTCGCCGCCGTCGCGCGCCGCGCACCGCAG CTGGCAAGAGGTGACCAATGA
Upstream 100 bases:
>100_bases GCGCTGCCCGTGTTGTCCAGCAAGCAGAAGTGGGAGACGGCGTTGCTGCCAGCTGCCGAACATGCCTGAGTCCCCTGCTG CGCAGGCCCCACGCGGTGAG
Downstream 100 bases:
>100_bases CCGAGGAAACGCAGGAAGCGGTGGCCGGACCGCCGGCCAACGTGGTCTCCGGGGTGATCAAGGCGATCCGCCCCCGGCAA TGGGTGAAGAACGTGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatase; Phosphoesterase PA-Phosphatase ; Phosphoesterase PA-Phosphatase Related Protein; PAP2 Superfamily Protein; Conserved Transmembrane Protein; Integral Membrane Protein; Transmembrane Protein
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MAALVAVQAALSKRPGVLTVARALSHFGEHSIGWVAAAALGALCSPRRRADWLAAGAGAFVAHAAAVVVKRIVRRERPHH PAVVVNVGTPSRLSFPSAHATSTTAAAILLGRITGLPLPAVLVPPMALSRMVLGVHYPSDVACGIALGAGVAAVARRAPQ LARGDQ
Sequences:
>Translated_166_residues MAALVAVQAALSKRPGVLTVARALSHFGEHSIGWVAAAALGALCSPRRRADWLAAGAGAFVAHAAAVVVKRIVRRERPHH PAVVVNVGTPSRLSFPSAHATSTTAAAILLGRITGLPLPAVLVPPMALSRMVLGVHYPSDVACGIALGAGVAAVARRAPQ LARGDQ >Mature_165_residues AALVAVQAALSKRPGVLTVARALSHFGEHSIGWVAAAALGALCSPRRRADWLAAGAGAFVAHAAAVVVKRIVRRERPHHP AVVVNVGTPSRLSFPSAHATSTTAAAILLGRITGLPLPAVLVPPMALSRMVLGVHYPSDVACGIALGAGVAAVARRAPQL ARGDQ
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16899; Mature: 16768
Theoretical pI: Translated: 12.33; Mature: 12.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALVAVQAALSKRPGVLTVARALSHFGEHSIGWVAAAALGALCSPRRRADWLAAGAGAF CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCHHHH VAHAAAVVVKRIVRRERPHHPAVVVNVGTPSRLSFPSAHATSTTAAAILLGRITGLPLPA HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCH VLVPPMALSRMVLGVHYPSDVACGIALGAGVAAVARRAPQLARGDQ HHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCC >Mature Secondary Structure AALVAVQAALSKRPGVLTVARALSHFGEHSIGWVAAAALGALCSPRRRADWLAAGAGAF HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCHHHH VAHAAAVVVKRIVRRERPHHPAVVVNVGTPSRLSFPSAHATSTTAAAILLGRITGLPLPA HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCH VLVPPMALSRMVLGVHYPSDVACGIALGAGVAAVARRAPQLARGDQ HHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA