| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406297
Identifier: 41406297
GI number: 41406297
Start: 204256
End: 204828
Strand: Direct
Name: 41406297
Synonym: MAP0199
Alternate gene names: NA
Gene position: 204256-204828 (Clockwise)
Preceding gene: 41406295
Following gene: 41406299
Centisome position: 4.23
GC content: 70.51
Gene sequence:
>573_bases ATGGCGATGAATCTCTTGCACCGGCACCGGTGCAGCTCGGCCGGCTGGGCGAAGGAGGTGGCCGACGAGCTGCTGCCCTG GGCGCTGGACGGTGTCGAATTGGGTTCCCGCACTTTGGAAATCGGGCCCGGCTACGGTGCGACGCTGAGCGCCCCGCTGG ATCGCACCGCCTCGCTGACCGCGGTCGAACTCGACCCGGTGATGGCCGATCGGCTGCAGCGCCGCTACGGCGACCGGGCC CGCGTCATCCAGGCCAGCGGCACCGAAACAGGTTTGCCCGCAAACCATTTCACCTCCGTGGTGTGCTTCACCATGCTGCA CCACGTGCCCAGCCCGCAGCTGCAGGACCAGCTGTTCGCCGAGGCGTTGCGGGTGCTGCAACCCGGTGGGACGTTCGCCG GCAGCGACGGCGTGCCGTCGTGGGCGTTTCGCCTGCTGCACGTCGCCGATACCTACAACCCGATCGCGCCGAAGGACCTG CCGGGCCGGCTGGCGGCCGCGGGCTTCGCCGACATCCACGCCGACGCCCGGGGCGGCCGGCAGCGCTGGCGGGCCGTCAA ACCGATCGACTAG
Upstream 100 bases:
>100_bases CGTGCTGGCCGATTTCCGACATATCGAGGCAGGATATCGGAAGCCCGCAGCATTGCGTCCGCCTAACGTCGAGATCGACC GACAGAAAGGCGTGATCGCG
Downstream 100 bases:
>100_bases GCGGGCACCGTCTCGCGGGCCTGCTCGTGCCGGCGCTGGCGTTCCATCGTCGCGAAGTAGAAGGCGAACGCGAACGCGAA GCTGGTGAACAGGCTGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MAMNLLHRHRCSSAGWAKEVADELLPWALDGVELGSRTLEIGPGYGATLSAPLDRTASLTAVELDPVMADRLQRRYGDRA RVIQASGTETGLPANHFTSVVCFTMLHHVPSPQLQDQLFAEALRVLQPGGTFAGSDGVPSWAFRLLHVADTYNPIAPKDL PGRLAAAGFADIHADARGGRQRWRAVKPID
Sequences:
>Translated_190_residues MAMNLLHRHRCSSAGWAKEVADELLPWALDGVELGSRTLEIGPGYGATLSAPLDRTASLTAVELDPVMADRLQRRYGDRA RVIQASGTETGLPANHFTSVVCFTMLHHVPSPQLQDQLFAEALRVLQPGGTFAGSDGVPSWAFRLLHVADTYNPIAPKDL PGRLAAAGFADIHADARGGRQRWRAVKPID >Mature_189_residues AMNLLHRHRCSSAGWAKEVADELLPWALDGVELGSRTLEIGPGYGATLSAPLDRTASLTAVELDPVMADRLQRRYGDRAR VIQASGTETGLPANHFTSVVCFTMLHHVPSPQLQDQLFAEALRVLQPGGTFAGSDGVPSWAFRLLHVADTYNPIAPKDLP GRLAAAGFADIHADARGGRQRWRAVKPID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20557; Mature: 20425
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMNLLHRHRCSSAGWAKEVADELLPWALDGVELGSRTLEIGPGYGATLSAPLDRTASLT CCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCEECCCCCCCCCEE AVELDPVMADRLQRRYGDRARVIQASGTETGLPANHFTSVVCFTMLHHVPSPQLQDQLFA EEECCHHHHHHHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH EALRVLQPGGTFAGSDGVPSWAFRLLHVADTYNPIAPKDLPGRLAAAGFADIHADARGGR HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCHHHHHCCCCCCH QRWRAVKPID HHHCCCCCCC >Mature Secondary Structure AMNLLHRHRCSSAGWAKEVADELLPWALDGVELGSRTLEIGPGYGATLSAPLDRTASLT CCHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCEECCCCCCCCCEE AVELDPVMADRLQRRYGDRARVIQASGTETGLPANHFTSVVCFTMLHHVPSPQLQDQLFA EEECCHHHHHHHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH EALRVLQPGGTFAGSDGVPSWAFRLLHVADTYNPIAPKDLPGRLAAAGFADIHADARGGR HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCHHHHHCCCCCCH QRWRAVKPID HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA