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The map label for this gene is yvdB [H]

Identifier: 41406225

GI number: 41406225

Start: 134277

End: 135842

Strand: Direct

Name: yvdB [H]

Synonym: MAP0127

Alternate gene names: 41406225

Gene position: 134277-135842 (Clockwise)

Preceding gene: 41406224

Following gene: 41406227

Centisome position: 2.78

GC content: 67.82

Gene sequence:

>1566_bases
TTGACGAATTCAGGGGAGGGCCCCATGCAACGAGCCGGATCACCAGAGCGGCAAGGTGTGTCGACGTCGCGAAGCGAACG
GCTCCGTGAGGTGCTCCGCTACGATCTGCCCGCCTCGTTGGTGGTTTTCCTGGTGGCACTTCCGCTGTCGCTGGGGATCG
CGATCGCTTCGGACGCCCCGGTTCTCGCCGGCCTGATCGCTGCGATCGTCGGGGGCATCGTCGGCGGATGGCTCGGGGGA
TCGCCGCTACAGGTCAGCGGACCCGCCGCCGGGCTCACCGTCGTGGTGGCCGACGTGGTAGCCGAATTCGGCTGGGGTGT
AACCTGTTTCATCACCGTCGTCGCGGGAGTCCTGCAGGTCTTGTTGGGATTCAGCAGGATCGCCCGCGCCGCCCTGGCCA
TCTCGCCCGTCGTGGTGCACGCCATGCTGGCCGGTATCGGCATCACGATCGCCCTGCAGCAGGTGCACGTGCTGTTGGGC
GGGTCATCCAAGAGTTCGGCCTGGAGCAATGTCACCGGCCTGCCCGCGCAGATTCTCGGTGCGCACCGCCCGGGACTGGT
GTTGGGCCTGCTGGTGATCGCGATCCTGGTGGCCTGGCGCTGGGTCCCGGCCCGGCTGGCCATCGTCCCCGGCCCGCTGG
TCGCCATCGTGGTGGTCACGATCATCTCAATGGTGCTGCCGTTCAAGGTATCCCGGATCGAGCTGGACGGCTCGGTGCTG
GACGCGGTGCGGTTGCCGTCCCTGCCGCACGGGAATTGGGGGGCCGTCGCGATCGCCGTGATCACCGTCACCCTGATCAC
CAGCGTGCAGAGCCTGCTCACCGCGGTGTCGATCGACCGCATGCACACCGGCCCCCGAACAGATTTCAACCGCGAGCTGA
TCGGCCAGGGCGCCGCGAACATCGCGTCGGGCGCGCTGGGTGGGCTGCCCATCGCCGGGGTCATCGTGCGCAGCTCGGCG
AACGTCAACGCCGGTGCGAAAACCCGCGCTTCGACCATCATGCACGGTTTCTGGGTGCTGGTGTTCGCGGTGCCTTTTGC
CGGGCTGGTCGAAAAGATCCCCACCGCCGCGCTTGCCGGCCTGCTGATCGTCATCGGGATCGAGTTGCTGAAGCCGGCGC
ACATCGAAACCGCTTTGCGCAACGGCGATCTCGCCATCTATCTGGTCACGGTCACCAGCGTCATCTTCCTCAACCTGCTG
CACGGCGTGCTGATCGGTCTGCTGCTCGCCGTGGTGGTGACCGGGTGGCGGGTGGTGCGGGCCAGGATCGAGGCCGAACC
GGTGGGCGACGGATGGCACGTCGTCATCGAGGGGGCATGCACCTTCCTGGCGTTGCCACGGCTGACCGGCGTGCTGGCCT
CCATCCCCGAGCGCACCTCGGTGACCGTGCACCTGCTCACCAACTATCTCGATCACGCCGCGCATCAGGCGATCGGCGAC
TGGCAACGACGGCACTGCGCCACCGGTGGAACGGTCGAGGTCCGCGACACGGCCGAGCCGGCGGCGCGGCGCCGCAACTC
GCACCTGAGCCTGGTCGAGCAGGTCTCTTCGCCCGGGGGTGCGTGA

Upstream 100 bases:

>100_bases
TGGACAACGACGTTCCTGGTATCTGTAATCGCCCGCGCTGTACGGATATTCGAACCTTCGGCGTGTCGTTACCGGGTGGA
TATCCAAAAGCCCACCGCCA

Downstream 100 bases:

>100_bases
CCTCCGCGCCCGGGGGCGCGTGACCTGCGCGCGCTACCTCAGGTCGGCGGCCACCCGCTCCAGCGCGGCGAGGTGGTCGT
CGACGCCGGCGAACCCGGCC

Product: hypothetical protein

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MTNSGEGPMQRAGSPERQGVSTSRSERLREVLRYDLPASLVVFLVALPLSLGIAIASDAPVLAGLIAAIVGGIVGGWLGG
SPLQVSGPAAGLTVVVADVVAEFGWGVTCFITVVAGVLQVLLGFSRIARAALAISPVVVHAMLAGIGITIALQQVHVLLG
GSSKSSAWSNVTGLPAQILGAHRPGLVLGLLVIAILVAWRWVPARLAIVPGPLVAIVVVTIISMVLPFKVSRIELDGSVL
DAVRLPSLPHGNWGAVAIAVITVTLITSVQSLLTAVSIDRMHTGPRTDFNRELIGQGAANIASGALGGLPIAGVIVRSSA
NVNAGAKTRASTIMHGFWVLVFAVPFAGLVEKIPTAALAGLLIVIGIELLKPAHIETALRNGDLAIYLVTVTSVIFLNLL
HGVLIGLLLAVVVTGWRVVRARIEAEPVGDGWHVVIEGACTFLALPRLTGVLASIPERTSVTVHLLTNYLDHAAHQAIGD
WQRRHCATGGTVEVRDTAEPAARRRNSHLSLVEQVSSPGGA

Sequences:

>Translated_521_residues
MTNSGEGPMQRAGSPERQGVSTSRSERLREVLRYDLPASLVVFLVALPLSLGIAIASDAPVLAGLIAAIVGGIVGGWLGG
SPLQVSGPAAGLTVVVADVVAEFGWGVTCFITVVAGVLQVLLGFSRIARAALAISPVVVHAMLAGIGITIALQQVHVLLG
GSSKSSAWSNVTGLPAQILGAHRPGLVLGLLVIAILVAWRWVPARLAIVPGPLVAIVVVTIISMVLPFKVSRIELDGSVL
DAVRLPSLPHGNWGAVAIAVITVTLITSVQSLLTAVSIDRMHTGPRTDFNRELIGQGAANIASGALGGLPIAGVIVRSSA
NVNAGAKTRASTIMHGFWVLVFAVPFAGLVEKIPTAALAGLLIVIGIELLKPAHIETALRNGDLAIYLVTVTSVIFLNLL
HGVLIGLLLAVVVTGWRVVRARIEAEPVGDGWHVVIEGACTFLALPRLTGVLASIPERTSVTVHLLTNYLDHAAHQAIGD
WQRRHCATGGTVEVRDTAEPAARRRNSHLSLVEQVSSPGGA
>Mature_520_residues
TNSGEGPMQRAGSPERQGVSTSRSERLREVLRYDLPASLVVFLVALPLSLGIAIASDAPVLAGLIAAIVGGIVGGWLGGS
PLQVSGPAAGLTVVVADVVAEFGWGVTCFITVVAGVLQVLLGFSRIARAALAISPVVVHAMLAGIGITIALQQVHVLLGG
SSKSSAWSNVTGLPAQILGAHRPGLVLGLLVIAILVAWRWVPARLAIVPGPLVAIVVVTIISMVLPFKVSRIELDGSVLD
AVRLPSLPHGNWGAVAIAVITVTLITSVQSLLTAVSIDRMHTGPRTDFNRELIGQGAANIASGALGGLPIAGVIVRSSAN
VNAGAKTRASTIMHGFWVLVFAVPFAGLVEKIPTAALAGLLIVIGIELLKPAHIETALRNGDLAIYLVTVTSVIFLNLLH
GVLIGLLLAVVVTGWRVVRARIEAEPVGDGWHVVIEGACTFLALPRLTGVLASIPERTSVTVHLLTNYLDHAAHQAIGDW
QRRHCATGGTVEVRDTAEPAARRRNSHLSLVEQVSSPGGA

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Escherichia coli, GI87081859, Length=414, Percent_Identity=28.0193236714976, Blast_Score=108, Evalue=9e-25,
Organism=Drosophila melanogaster, GI85815873, Length=475, Percent_Identity=23.5789473684211, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 54011; Mature: 53880

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSGEGPMQRAGSPERQGVSTSRSERLREVLRYDLPASLVVFLVALPLSLGIAIASDAP
CCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEECCCCH
VLAGLIAAIVGGIVGGWLGGSPLQVSGPAAGLTVVVADVVAEFGWGVTCFITVVAGVLQV
HHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LLGFSRIARAALAISPVVVHAMLAGIGITIALQQVHVLLGGSSKSSAWSNVTGLPAQILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHC
AHRPGLVLGLLVIAILVAWRWVPARLAIVPGPLVAIVVVTIISMVLPFKVSRIELDGSVL
CCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCHHH
DAVRLPSLPHGNWGAVAIAVITVTLITSVQSLLTAVSIDRMHTGPRTDFNRELIGQGAAN
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHH
IASGALGGLPIAGVIVRSSANVNAGAKTRASTIMHGFWVLVFAVPFAGLVEKIPTAALAG
HHCCCCCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIVIGIELLKPAHIETALRNGDLAIYLVTVTSVIFLNLLHGVLIGLLLAVVVTGWRVVR
HHHHHHHHHHCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARIEAEPVGDGWHVVIEGACTFLALPRLTGVLASIPERTSVTVHLLTNYLDHAAHQAIGD
HHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
WQRRHCATGGTVEVRDTAEPAARRRNSHLSLVEQVSSPGGA
HHHHHCCCCCEEEECCCCCHHHHHCCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
TNSGEGPMQRAGSPERQGVSTSRSERLREVLRYDLPASLVVFLVALPLSLGIAIASDAP
CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEECCCCH
VLAGLIAAIVGGIVGGWLGGSPLQVSGPAAGLTVVVADVVAEFGWGVTCFITVVAGVLQV
HHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LLGFSRIARAALAISPVVVHAMLAGIGITIALQQVHVLLGGSSKSSAWSNVTGLPAQILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHC
AHRPGLVLGLLVIAILVAWRWVPARLAIVPGPLVAIVVVTIISMVLPFKVSRIELDGSVL
CCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCHHH
DAVRLPSLPHGNWGAVAIAVITVTLITSVQSLLTAVSIDRMHTGPRTDFNRELIGQGAAN
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHH
IASGALGGLPIAGVIVRSSANVNAGAKTRASTIMHGFWVLVFAVPFAGLVEKIPTAALAG
HHCCCCCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIVIGIELLKPAHIETALRNGDLAIYLVTVTSVIFLNLLHGVLIGLLLAVVVTGWRVVR
HHHHHHHHHHCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARIEAEPVGDGWHVVIEGACTFLALPRLTGVLASIPERTSVTVHLLTNYLDHAAHQAIGD
HHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
WQRRHCATGGTVEVRDTAEPAARRRNSHLSLVEQVSSPGGA
HHHHHCCCCCEEEECCCCCHHHHHCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]