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The map label for this gene is ygaK [H]

Identifier: 41406179

GI number: 41406179

Start: 90461

End: 91777

Strand: Direct

Name: ygaK [H]

Synonym: MAP0081

Alternate gene names: 41406179

Gene position: 90461-91777 (Clockwise)

Preceding gene: 41406177

Following gene: 41406180

Centisome position: 1.87

GC content: 69.63

Gene sequence:

>1317_bases
CTGTCGACCGCCCTCGGCGGGAAGGTGCTGCTCCCGGACAGCCCCCAATTCGCCGGGGCCAAGCAAGTTTTCAACACCAA
CTACAACGGCTCCACGCCCGCTGCGGTCGTCACGCCGACGTCGGCGGCGGACGTGCAGAAGGCGATGGCGTTCGCCGCCG
CCCACAACCTCAAGGTCGTTCCGCGCAGCGGCGGGCACTCCTATACCGGCGCGTCCACCGCGAACGGGACTATGGTGCTC
GACCTGCGTCAACTGCCCGGCGACGCCAACTTCGACGCCGCTACGGGACAGGTCACCGTGACACCGGCCACCAGTCTCTA
CACCATGCACCGAACCCTGGCGGCCGTCGGCCGGGGCGTCCCGACGGGGACCTGCCCGTCGGTCGGCGCCGCAGGTCACG
CGCTGGGCGGCGGGATGGGCGCTCAGTCGCGGCATGCGGGCCTGCTCTGCGATCAGTTGACGTCGGCGTCGGTGGTGCTG
CCCAGCGGCCAGGCGGTCACCGCGTCCGCCGCCAGCAACCCCGACCTGTTCTGGGCGTTACGCGGCGGCGGTGGGGGCAA
CTTCGGTGTGACCACCTCGCTGACCTTCGCCACGTTCCCCACCAAGGACGTCGATGCCGTCAACCTCAACTTCCCGCCGC
AGTCGTTCGCGCAGGTGCTGGTGGGCTGGCAGAACTGGTTGCGCACCGCGGACCCGAACAGCTGGGCGTTGGCGGACGCC
ACCGTCGACGCGATGGGCGTGCACTGCCGCATCCTGGCGACCTGCCCGGCCGGGTCCGGCAACAGCGCCGCGGCGGCCAT
CACGCAGGCGGTGGGAATACAACCCTCCGGGGTGGAGACCCACACCTTCAACTACATGGACCTGGTGAACTACCTGGCCG
TGGGAAACCTCAACCCGCAGCCCCTCGGATACGTCGGCGGGTCCGACGTGTTCCCCACCGTCAATGCGGCGGTGGCGCAG
GGCATCGCCGCGGCGGTCAACGCGTTTCCCCGCAACGCGGGCCGGATGCTGGCCATCATGCACGCGCTGGACGGCGCGCT
GGCCACCGTGGCGCCCGCCGCGACGGCGTTTCCGTGGCGACGGCAGTCGGCGCTGGTGCAGTGGTACGTCGAAACCTCCG
GTGACCCCGCGGCCGCAACCAACTGGCTCGCCTCGGCACACCAAGCGGTGCAACAGTATTCGGTCGGCGGCTATGTGAAC
TATCTGGAGGCCAACCAGTCACCGGCGCGCTACTTCGGCCCCAACCTGTCCCGGCTGAGCGCGGTGCGCCAGAAGTACGA
TCCCGGCCGGGTCATGTTCTCCGGGCTCAATTACTAG

Upstream 100 bases:

>100_bases
GCAGACGTTTCTGCGCGGAGCAGTGGGAGCGTTGGCGGCCGGCGCGGTGCTCGGCGCACCCCGGGTTGGAGCCGATCCGC
GACCCTCGGGCTGGGAAGGT

Downstream 100 bases:

>100_bases
GCGCCGGCGCCGCCGTCGCCAATCGATGATTAGCCCGCCTTGGTACGGGGTACTTCCTCTGCATCTGTGTGGACGAAGGG
TTGGCGAATGGCAGTGGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSTALGGKVLLPDSPQFAGAKQVFNTNYNGSTPAAVVTPTSAADVQKAMAFAAAHNLKVVPRSGGHSYTGASTANGTMVL
DLRQLPGDANFDAATGQVTVTPATSLYTMHRTLAAVGRGVPTGTCPSVGAAGHALGGGMGAQSRHAGLLCDQLTSASVVL
PSGQAVTASAASNPDLFWALRGGGGGNFGVTTSLTFATFPTKDVDAVNLNFPPQSFAQVLVGWQNWLRTADPNSWALADA
TVDAMGVHCRILATCPAGSGNSAAAAITQAVGIQPSGVETHTFNYMDLVNYLAVGNLNPQPLGYVGGSDVFPTVNAAVAQ
GIAAAVNAFPRNAGRMLAIMHALDGALATVAPAATAFPWRRQSALVQWYVETSGDPAAATNWLASAHQAVQQYSVGGYVN
YLEANQSPARYFGPNLSRLSAVRQKYDPGRVMFSGLNY

Sequences:

>Translated_438_residues
MSTALGGKVLLPDSPQFAGAKQVFNTNYNGSTPAAVVTPTSAADVQKAMAFAAAHNLKVVPRSGGHSYTGASTANGTMVL
DLRQLPGDANFDAATGQVTVTPATSLYTMHRTLAAVGRGVPTGTCPSVGAAGHALGGGMGAQSRHAGLLCDQLTSASVVL
PSGQAVTASAASNPDLFWALRGGGGGNFGVTTSLTFATFPTKDVDAVNLNFPPQSFAQVLVGWQNWLRTADPNSWALADA
TVDAMGVHCRILATCPAGSGNSAAAAITQAVGIQPSGVETHTFNYMDLVNYLAVGNLNPQPLGYVGGSDVFPTVNAAVAQ
GIAAAVNAFPRNAGRMLAIMHALDGALATVAPAATAFPWRRQSALVQWYVETSGDPAAATNWLASAHQAVQQYSVGGYVN
YLEANQSPARYFGPNLSRLSAVRQKYDPGRVMFSGLNY
>Mature_437_residues
STALGGKVLLPDSPQFAGAKQVFNTNYNGSTPAAVVTPTSAADVQKAMAFAAAHNLKVVPRSGGHSYTGASTANGTMVLD
LRQLPGDANFDAATGQVTVTPATSLYTMHRTLAAVGRGVPTGTCPSVGAAGHALGGGMGAQSRHAGLLCDQLTSASVVLP
SGQAVTASAASNPDLFWALRGGGGGNFGVTTSLTFATFPTKDVDAVNLNFPPQSFAQVLVGWQNWLRTADPNSWALADAT
VDAMGVHCRILATCPAGSGNSAAAAITQAVGIQPSGVETHTFNYMDLVNYLAVGNLNPQPLGYVGGSDVFPTVNAAVAQG
IAAAVNAFPRNAGRMLAIMHALDGALATVAPAATAFPWRRQSALVQWYVETSGDPAAATNWLASAHQAVQQYSVGGYVNY
LEANQSPARYFGPNLSRLSAVRQKYDPGRVMFSGLNY

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 45017; Mature: 44886

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS00862 OX2_COVAL_FAD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTALGGKVLLPDSPQFAGAKQVFNTNYNGSTPAAVVTPTSAADVQKAMAFAAAHNLKVV
CCCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEE
PRSGGHSYTGASTANGTMVLDLRQLPGDANFDAATGQVTVTPATSLYTMHRTLAAVGRGV
ECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCC
PTGTCPSVGAAGHALGGGMGAQSRHAGLLCDQLTSASVVLPSGQAVTASAASNPDLFWAL
CCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCEEEECCCCEEEECCCCCCCEEEEE
RGGGGGNFGVTTSLTFATFPTKDVDAVNLNFPPQSFAQVLVGWQNWLRTADPNSWALADA
ECCCCCCCCEEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEECC
TVDAMGVHCRILATCPAGSGNSAAAAITQAVGIQPSGVETHTFNYMDLVNYLAVGNLNPQ
CHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHCCCCCC
PLGYVGGSDVFPTVNAAVAQGIAAAVNAFPRNAGRMLAIMHALDGALATVAPAATAFPWR
CCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHCCHHHCCCCC
RQSALVQWYVETSGDPAAATNWLASAHQAVQQYSVGGYVNYLEANQSPARYFGPNLSRLS
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCHHHHH
AVRQKYDPGRVMFSGLNY
HHHHHCCCCEEEECCCCC
>Mature Secondary Structure 
STALGGKVLLPDSPQFAGAKQVFNTNYNGSTPAAVVTPTSAADVQKAMAFAAAHNLKVV
CCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEE
PRSGGHSYTGASTANGTMVLDLRQLPGDANFDAATGQVTVTPATSLYTMHRTLAAVGRGV
ECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCC
PTGTCPSVGAAGHALGGGMGAQSRHAGLLCDQLTSASVVLPSGQAVTASAASNPDLFWAL
CCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCEEEECCCCEEEECCCCCCCEEEEE
RGGGGGNFGVTTSLTFATFPTKDVDAVNLNFPPQSFAQVLVGWQNWLRTADPNSWALADA
ECCCCCCCCEEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEECC
TVDAMGVHCRILATCPAGSGNSAAAAITQAVGIQPSGVETHTFNYMDLVNYLAVGNLNPQ
CHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHCCCCCC
PLGYVGGSDVFPTVNAAVAQGIAAAVNAFPRNAGRMLAIMHALDGALATVAPAATAFPWR
CCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHCCHHHCCCCC
RQSALVQWYVETSGDPAAATNWLASAHQAVQQYSVGGYVNYLEANQSPARYFGPNLSRLS
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCHHHHH
AVRQKYDPGRVMFSGLNY
HHHHHCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]