| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406176
Identifier: 41406176
GI number: 41406176
Start: 88415
End: 88690
Strand: Direct
Name: 41406176
Synonym: MAP0078
Alternate gene names: NA
Gene position: 88415-88690 (Clockwise)
Preceding gene: 41406175
Following gene: 41406177
Centisome position: 1.83
GC content: 72.83
Gene sequence:
>276_bases GTGACGGTAATTGCGGCCATCGGCGCGCTCGCGACGGCGGCCTTCCTCGGCTACCACGTCGGCCGCCGCGCGGGCTCGCG GCGGCCGACCTGGGCGAAGCGCACCAGCAGGCCCGCGTTGGGCAGGCTGGCGATCACCCTGATCGCGATGATCGCGGCGC GTCGGATCCAGCAGCGCCTCCGGGCCGAGCGCGGGCGCGCCGCGACCCACGCATCGAGACTGGTTGCACCGCTCGGTATT TTGCGTGCGGGCGTAACGCGGATCCGGTGCTACTAG
Upstream 100 bases:
>100_bases CTGGCGGACACCGCCTAGGACGGCACCCGGCGGTCAGTTGGTGGCCGAGGCGTAGCCCGCTCGTGACCTTCTCGCGACGG CGGCCAAGGACGCTCATCAG
Downstream 100 bases:
>100_bases ATAAGAGGAACACAACGAGATGGCTGCACTGCAGGACAAGGTGGCGTTGGTGACCGGGGCGTCGTCGGGACTGGGCGCCG AAACCGCCAAACTGTTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MTVIAAIGALATAAFLGYHVGRRAGSRRPTWAKRTSRPALGRLAITLIAMIAARRIQQRLRAERGRAATHASRLVAPLGI LRAGVTRIRCY
Sequences:
>Translated_91_residues MTVIAAIGALATAAFLGYHVGRRAGSRRPTWAKRTSRPALGRLAITLIAMIAARRIQQRLRAERGRAATHASRLVAPLGI LRAGVTRIRCY >Mature_90_residues TVIAAIGALATAAFLGYHVGRRAGSRRPTWAKRTSRPALGRLAITLIAMIAARRIQQRLRAERGRAATHASRLVAPLGIL RAGVTRIRCY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9874; Mature: 9743
Theoretical pI: Translated: 12.88; Mature: 12.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIAAIGALATAAFLGYHVGRRAGSRRPTWAKRTSRPALGRLAITLIAMIAARRIQQRL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RAERGRAATHASRLVAPLGILRAGVTRIRCY HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TVIAAIGALATAAFLGYHVGRRAGSRRPTWAKRTSRPALGRLAITLIAMIAARRIQQRL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RAERGRAATHASRLVAPLGILRAGVTRIRCY HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA