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The map label for this gene is dnaB

Identifier: 41406169

GI number: 41406169

Start: 76950

End: 79577

Strand: Direct

Name: dnaB

Synonym: MAP0071

Alternate gene names: 41406169

Gene position: 76950-79577 (Clockwise)

Preceding gene: 41406168

Following gene: 41406172

Centisome position: 1.59

GC content: 65.49

Gene sequence:

>2628_bases
GTGGCGGTCGTCGATGACTTGACGTCGGGCATGGATTCGTCGTCGCCCAGTGAGGATTTCGGGCGACAGCCACCGCAGGA
CCTGGCGGCCGAGCAGGCCGTGCTGGGCGGCATGCTGCTGAGCAAGGACGCCATCGCCGACGTGTTGGAACGGCTGCGGC
CCGGCGACTTCTACCGTCCCGCGCACCAGAACGTCTACGACGCGATCCTGGACCTGTACGGGCGGGGTGAGCCGGCCGAT
GCCGTGACCGTCGCCGCGGAGCTGGACCGCCGTAATCTGCTGCGCCGCATCGGCGGTGCGCCGTATCTGCACACGCTGAT
CTCGACGGTGCCGACCGCGGCGAACGCGGGCTACTACGCGACCATCGTGGCCGAGAAGGCGCTGTTGCGCCGCCTGGTGG
AGGCCGGCACCCGTGTGGTGCAGTACGGCTACGCGGGCGCCGAGGGCGCCGATGTGGCCGAGGTGGTCGATCGCGCCCAG
GCCGAGATCTACGAGGTGGCCGAGCGCCGGACCACGGAGGATTTCGTTCCGCTCGAGGATCTGCTGCAGCCGACGATGGA
CGAGATCGACGCCATCGCCTCCAACGGCGGTGTGGCGCGCGGCGTGCCGACCGGTTTCACCGAACTCGACGAGGTGACCA
ACGGCCTGCACGCCGGTCAGATGATCATCGTGGCGGCCAGGCCTGGAGTGGGCAAGGCGCTGGCGTTGGATACGCCGCTG
CCGACGCCGACCGGGTGGACGACGATGGGCGATGTCGCGGTCGGTGACGAGTTGCTCGGCGACGACGGGCGGCCGACGCG
GGTGGTAGCGGCCACCGACGTGATGCTGGGACGGCCATGCTACGAGGTCGAGTTCTCTGATGGGACCGTGATCGTCGCCG
ACGCTGCGCATCAGTGGCTGACCGAAACACGCGCATCCCGAAAGTCGGCGCAGGCAGCGGCCGTTGGCTACAACCGGCAC
AAGAATCAGCGCACCTTTGCGGCGGTGCGAACGACTGCCGAGATCGCCGAAACCCTGCGCTGCCCCACCCAAGACCGGCG
GTTGAACCACAGCGTGGTCAATGCGCGCGCGCTCGAGCTCCCGGACCGCGAATTCCTGGTGCCCCCTTACACACTCGGCG
CCTGGCTCGGGGATGGCACCAGCGCCGCCGCGCAGATCACCGCTGCCGATCCTGAAATCATCATGCGGATTGAAGCGGAC
GGCGTCGTCGCGGTCCCGTCGGGATCCGCCCCGTACCGTTACCAATTGCGTTTACCTCCGGGTGCTGAGCAAGCACCGCG
GCGGTGCGTGGTGTGTGGCAAGTCGTTTATTCCCCAAACCAGCCAGGTGCGGACCTGTGGGCGTTCGTGCGGCGGTCGCG
CGCGCTTCATGTCCGACCCGGTGCCGAGCCCGACCTGCGTTCGCTGTGGCGGACCGTCGGCAGGAATGCGGTTGTGCCTG
AAGTGCCACTCCACCGTGGGGACGTTGCAGGCGCGGTTGCGCACCATCGGCGTGCTCGGCAACAAGCACATTCCGACGGA
ATACCTGCGGGGGTCCGAGGCGCAGCGGCGTGCCTTGCTCGCCGGCTTGCTCGACACCGACGGAACCGTGACGGTCGGCG
GTGCCGTCCAATTTTCGGTTACCAACCAACGGCTGGCGCGTGATGTCAACGAGCTTATTGTCAGCCTCGGCTATCGCTGC
CAAACCTCGACCAAACGTGTCCAGGGCCGCTCCGAAACGTCGAGCATCGCCTACACCCTGACCTTTTCCACCGAAGATAA
AGTGTTCGCGTTGGAGCGAAAGGCCATCGCGCACAAGGAGCGCCGGGCCGTAACAGGCACCTCACGCTGTGGGTCGCGCT
TCATCGTGGACGTCCGCCCGATCGAGTCGGTGGCCGTGCGCTGCGTCGAGGTGGACAACGACAGCCACATGTATCTGGCG
AGCAGGGCGATGGTGCCCACACATAACTCCACCCTCGGTCTCGACTTCTTGCGATCGTGTTCGATCAAGCACCGGATGGC
CAGCGTCATCTTCTCGCTGGAAATGAGCAAGTCCGAGATCGTGATGCGGCTGTTGTCGGCGGAGGCGAAAATCAAACTCT
CCGATATGCGTTCGGGTCGCATGAGCGACGAGGACTGGACGCGGTTGGCGCGGCGGATGAGCGAAATCAGCGAGGCGCCA
CTGTATATCGACGATTCGCCGAACTTGACGATGATGGAGATCCGCGCCAAGGCGCGCCGGCTCCGGCAGAAAGCCGATCT
GCGGCTGGTGGTGGTCGATTACCTGCAGCTGATGTCGTCAGGAAAGAAAGTCGAGTCCCGGCAGCTCGAGGTCTCCGAAT
TCTCCCGTCAGCTCAAGCTTTTGGCCAAGGAACTCGAGGTTCCCGTCGTGGCAATCAGCCAGCTGAACCGCGGTCCCGAG
CAGCGCACCGACAAGAAGCCGATGCTGTCCGACCTTCGCGAGTCGGGATCGCTGGAGCAGGATGCGGACATGGTGATCCT
GCTGAATCGGCCCGACGCGTTCGAGCGGGACGATCCGCGTGGGGGAGAGGCGGATTTCATTCTGGCCAAACACCGTAACG
GTCCGACCAAGACAGTGACCGTTGCGCATCAGCTGCATCTGTCGCGCTTCGCCAACATGGCGCGCTGA

Upstream 100 bases:

>100_bases
GCGGGTGCGATACGGCCAAGATGTCAGCACCTTGACCTACGCTCAATGTCAACTGTCGAATGTATGTTCGGATTGCGTGG
ATCAGGGGAGGAGGGAATCC

Downstream 100 bases:

>100_bases
CGTAGATTCTCAAACTCCGTGTCCAATTCTCAGACGAAATGTCCACTCGATGTCCCATTGCACATCCCGAATGAGACGAC
CCGAGAGCTGCTGCCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 875; Mature: 874

Protein sequence:

>875_residues
MAVVDDLTSGMDSSSPSEDFGRQPPQDLAAEQAVLGGMLLSKDAIADVLERLRPGDFYRPAHQNVYDAILDLYGRGEPAD
AVTVAAELDRRNLLRRIGGAPYLHTLISTVPTAANAGYYATIVAEKALLRRLVEAGTRVVQYGYAGAEGADVAEVVDRAQ
AEIYEVAERRTTEDFVPLEDLLQPTMDEIDAIASNGGVARGVPTGFTELDEVTNGLHAGQMIIVAARPGVGKALALDTPL
PTPTGWTTMGDVAVGDELLGDDGRPTRVVAATDVMLGRPCYEVEFSDGTVIVADAAHQWLTETRASRKSAQAAAVGYNRH
KNQRTFAAVRTTAEIAETLRCPTQDRRLNHSVVNARALELPDREFLVPPYTLGAWLGDGTSAAAQITAADPEIIMRIEAD
GVVAVPSGSAPYRYQLRLPPGAEQAPRRCVVCGKSFIPQTSQVRTCGRSCGGRARFMSDPVPSPTCVRCGGPSAGMRLCL
KCHSTVGTLQARLRTIGVLGNKHIPTEYLRGSEAQRRALLAGLLDTDGTVTVGGAVQFSVTNQRLARDVNELIVSLGYRC
QTSTKRVQGRSETSSIAYTLTFSTEDKVFALERKAIAHKERRAVTGTSRCGSRFIVDVRPIESVAVRCVEVDNDSHMYLA
SRAMVPTHNSTLGLDFLRSCSIKHRMASVIFSLEMSKSEIVMRLLSAEAKIKLSDMRSGRMSDEDWTRLARRMSEISEAP
LYIDDSPNLTMMEIRAKARRLRQKADLRLVVVDYLQLMSSGKKVESRQLEVSEFSRQLKLLAKELEVPVVAISQLNRGPE
QRTDKKPMLSDLRESGSLEQDADMVILLNRPDAFERDDPRGGEADFILAKHRNGPTKTVTVAHQLHLSRFANMAR

Sequences:

>Translated_875_residues
MAVVDDLTSGMDSSSPSEDFGRQPPQDLAAEQAVLGGMLLSKDAIADVLERLRPGDFYRPAHQNVYDAILDLYGRGEPAD
AVTVAAELDRRNLLRRIGGAPYLHTLISTVPTAANAGYYATIVAEKALLRRLVEAGTRVVQYGYAGAEGADVAEVVDRAQ
AEIYEVAERRTTEDFVPLEDLLQPTMDEIDAIASNGGVARGVPTGFTELDEVTNGLHAGQMIIVAARPGVGKALALDTPL
PTPTGWTTMGDVAVGDELLGDDGRPTRVVAATDVMLGRPCYEVEFSDGTVIVADAAHQWLTETRASRKSAQAAAVGYNRH
KNQRTFAAVRTTAEIAETLRCPTQDRRLNHSVVNARALELPDREFLVPPYTLGAWLGDGTSAAAQITAADPEIIMRIEAD
GVVAVPSGSAPYRYQLRLPPGAEQAPRRCVVCGKSFIPQTSQVRTCGRSCGGRARFMSDPVPSPTCVRCGGPSAGMRLCL
KCHSTVGTLQARLRTIGVLGNKHIPTEYLRGSEAQRRALLAGLLDTDGTVTVGGAVQFSVTNQRLARDVNELIVSLGYRC
QTSTKRVQGRSETSSIAYTLTFSTEDKVFALERKAIAHKERRAVTGTSRCGSRFIVDVRPIESVAVRCVEVDNDSHMYLA
SRAMVPTHNSTLGLDFLRSCSIKHRMASVIFSLEMSKSEIVMRLLSAEAKIKLSDMRSGRMSDEDWTRLARRMSEISEAP
LYIDDSPNLTMMEIRAKARRLRQKADLRLVVVDYLQLMSSGKKVESRQLEVSEFSRQLKLLAKELEVPVVAISQLNRGPE
QRTDKKPMLSDLRESGSLEQDADMVILLNRPDAFERDDPRGGEADFILAKHRNGPTKTVTVAHQLHLSRFANMAR
>Mature_874_residues
AVVDDLTSGMDSSSPSEDFGRQPPQDLAAEQAVLGGMLLSKDAIADVLERLRPGDFYRPAHQNVYDAILDLYGRGEPADA
VTVAAELDRRNLLRRIGGAPYLHTLISTVPTAANAGYYATIVAEKALLRRLVEAGTRVVQYGYAGAEGADVAEVVDRAQA
EIYEVAERRTTEDFVPLEDLLQPTMDEIDAIASNGGVARGVPTGFTELDEVTNGLHAGQMIIVAARPGVGKALALDTPLP
TPTGWTTMGDVAVGDELLGDDGRPTRVVAATDVMLGRPCYEVEFSDGTVIVADAAHQWLTETRASRKSAQAAAVGYNRHK
NQRTFAAVRTTAEIAETLRCPTQDRRLNHSVVNARALELPDREFLVPPYTLGAWLGDGTSAAAQITAADPEIIMRIEADG
VVAVPSGSAPYRYQLRLPPGAEQAPRRCVVCGKSFIPQTSQVRTCGRSCGGRARFMSDPVPSPTCVRCGGPSAGMRLCLK
CHSTVGTLQARLRTIGVLGNKHIPTEYLRGSEAQRRALLAGLLDTDGTVTVGGAVQFSVTNQRLARDVNELIVSLGYRCQ
TSTKRVQGRSETSSIAYTLTFSTEDKVFALERKAIAHKERRAVTGTSRCGSRFIVDVRPIESVAVRCVEVDNDSHMYLAS
RAMVPTHNSTLGLDFLRSCSIKHRMASVIFSLEMSKSEIVMRLLSAEAKIKLSDMRSGRMSDEDWTRLARRMSEISEAPL
YIDDSPNLTMMEIRAKARRLRQKADLRLVVVDYLQLMSSGKKVESRQLEVSEFSRQLKLLAKELEVPVVAISQLNRGPEQ
RTDKKPMLSDLRESGSLEQDADMVILLNRPDAFERDDPRGGEADFILAKHRNGPTKTVTVAHQLHLSRFANMAR

Specific function: Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity [H]

COG id: COG0305

COG function: function code L; Replicative DNA helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SF4 helicase domain [H]

Homologues:

Organism=Escherichia coli, GI1790486, Length=227, Percent_Identity=43.1718061674009, Blast_Score=190, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007694
- InterPro:   IPR006142
- InterPro:   IPR004042
- InterPro:   IPR006141 [H]

Pfam domain/function: PF03796 DnaB_C [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 95498; Mature: 95367

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: PS50819 INTEIN_ENDONUCLEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVDDLTSGMDSSSPSEDFGRQPPQDLAAEQAVLGGMLLSKDAIADVLERLRPGDFYRP
CCCHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AHQNVYDAILDLYGRGEPADAVTVAAELDRRNLLRRIGGAPYLHTLISTVPTAANAGYYA
HHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEE
TIVAEKALLRRLVEAGTRVVQYGYAGAEGADVAEVVDRAQAEIYEVAERRTTEDFVPLED
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LLQPTMDEIDAIASNGGVARGVPTGFTELDEVTNGLHAGQMIIVAARPGVGKALALDTPL
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCC
PTPTGWTTMGDVAVGDELLGDDGRPTRVVAATDVMLGRPCYEVEFSDGTVIVADAAHQWL
CCCCCCCCCCCHHHCHHHHCCCCCCEEEEEEEHHHHCCCEEEEEECCCEEEEECCHHHHH
TETRASRKSAQAAAVGYNRHKNQRTFAAVRTTAEIAETLRCPTQDRRLNHSVVNARALEL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCEEECC
PDREFLVPPYTLGAWLGDGTSAAAQITAADPEIIMRIEADGVVAVPSGSAPYRYQLRLPP
CCCCEECCCHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCEEEECCCCCCEEEEEECCC
GAEQAPRRCVVCGKSFIPQTSQVRTCGRSCGGRARFMSDPVPSPTCVRCGGPSAGMRLCL
CCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHH
KCHSTVGTLQARLRTIGVLGNKHIPTEYLRGSEAQRRALLAGLLDTDGTVTVGGAVQFSV
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEECCEEEEEE
TNQRLARDVNELIVSLGYRCQTSTKRVQGRSETSSIAYTLTFSTEDKVFALERKAIAHKE
CHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHH
RRAVTGTSRCGSRFIVDVRPIESVAVRCVEVDNDSHMYLASRAMVPTHNSTLGLDFLRSC
HHCCCCCCCCCCEEEEEECCHHHEEEEEEEECCCCEEEEEECEECCCCCCCCCHHHHHHH
SIKHRMASVIFSLEMSKSEIVMRLLSAEAKIKLSDMRSGRMSDEDWTRLARRMSEISEAP
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
LYIDDSPNLTMMEIRAKARRLRQKADLRLVVVDYLQLMSSGKKVESRQLEVSEFSRQLKL
EEECCCCCEEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHH
LAKELEVPVVAISQLNRGPEQRTDKKPMLSDLRESGSLEQDADMVILLNRPDAFERDDPR
HHHHHCCCHHHHHHHCCCCHHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCC
GGEADFILAKHRNGPTKTVTVAHQLHLSRFANMAR
CCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVVDDLTSGMDSSSPSEDFGRQPPQDLAAEQAVLGGMLLSKDAIADVLERLRPGDFYRP
CCHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AHQNVYDAILDLYGRGEPADAVTVAAELDRRNLLRRIGGAPYLHTLISTVPTAANAGYYA
HHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEE
TIVAEKALLRRLVEAGTRVVQYGYAGAEGADVAEVVDRAQAEIYEVAERRTTEDFVPLED
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LLQPTMDEIDAIASNGGVARGVPTGFTELDEVTNGLHAGQMIIVAARPGVGKALALDTPL
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCC
PTPTGWTTMGDVAVGDELLGDDGRPTRVVAATDVMLGRPCYEVEFSDGTVIVADAAHQWL
CCCCCCCCCCCHHHCHHHHCCCCCCEEEEEEEHHHHCCCEEEEEECCCEEEEECCHHHHH
TETRASRKSAQAAAVGYNRHKNQRTFAAVRTTAEIAETLRCPTQDRRLNHSVVNARALEL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCEEECC
PDREFLVPPYTLGAWLGDGTSAAAQITAADPEIIMRIEADGVVAVPSGSAPYRYQLRLPP
CCCCEECCCHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCEEEECCCCCCEEEEEECCC
GAEQAPRRCVVCGKSFIPQTSQVRTCGRSCGGRARFMSDPVPSPTCVRCGGPSAGMRLCL
CCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHH
KCHSTVGTLQARLRTIGVLGNKHIPTEYLRGSEAQRRALLAGLLDTDGTVTVGGAVQFSV
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEECCEEEEEE
TNQRLARDVNELIVSLGYRCQTSTKRVQGRSETSSIAYTLTFSTEDKVFALERKAIAHKE
CHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHH
RRAVTGTSRCGSRFIVDVRPIESVAVRCVEVDNDSHMYLASRAMVPTHNSTLGLDFLRSC
HHCCCCCCCCCCEEEEEECCHHHEEEEEEEECCCCEEEEEECEECCCCCCCCCHHHHHHH
SIKHRMASVIFSLEMSKSEIVMRLLSAEAKIKLSDMRSGRMSDEDWTRLARRMSEISEAP
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
LYIDDSPNLTMMEIRAKARRLRQKADLRLVVVDYLQLMSSGKKVESRQLEVSEFSRQLKL
EEECCCCCEEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHH
LAKELEVPVVAISQLNRGPEQRTDKKPMLSDLRESGSLEQDADMVILLNRPDAFERDDPR
HHHHHCCCHHHHHHHCCCCHHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCC
GGEADFILAKHRNGPTKTVTVAHQLHLSRFANMAR
CCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA