Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41406164

Identifier: 41406164

GI number: 41406164

Start: 73943

End: 74584

Strand: Direct

Name: 41406164

Synonym: MAP0066

Alternate gene names: NA

Gene position: 73943-74584 (Clockwise)

Preceding gene: 41406163

Following gene: 41406165

Centisome position: 1.53

GC content: 70.25

Gene sequence:

>642_bases
ATGACGCTGATCGCCATCCCGCTGTTCCCGCGGGTCACCACACTGGATGCGGTGGGACCTTACGAAGTGCTGCAACGGAT
TCCGTCTGTCCAGGTCGTGTTCGTCGGGCAGCGCCGGGGCGAGGTGCGCACCGAGAACGGGATGCTGGGCCTGGCCTGCG
ACGCCACCTTCGACGAGGTGAGCGCACCGGACGTGGTGGTGTTCCCCGGCGGCATCGGCACCCGGCAGCTCATTCACGAC
GAGGCAGTCCGGGCCTGGCTGCAAGCGGTGCACCCGCACACCAGATTCACCACCTCGGTGTGCACCGGCGCGCTGCTGCT
GGCCGCGGCCGGTCTGCTCGACGGACTCACCGCCACCACGCACTGGCGCGCCGCCGACCTGCTCAACGGATTGGGCGCCC
GCTACGTGGAGCAACGAGTCGTCGAACACCTGCCGCAGCGCATCATCACCGCGGCCGGGGTGTCCAGCGGCATCGACATG
GCCCTGCGGCTGGTGGAGCTGCTCGTCGACCGCCAGGCCGCGCAGGCCGCCCAGCTGCTCATCGAATACGACCCGCAGCC
GCCCTTCGACTCGGGTGCGTTCGGCAAGGCCGATGCGGCGACCGTGGCCCGGGCCGAGGAATACCTGACCGGCCGGCGCT
GA

Upstream 100 bases:

>100_bases
CACCCGACGCGCCACCGGGCTGGCTGCCGGACTGGCTGCGGCCGGCCGGATCGCGCCGCGGGCAGGCCGCGGAGCCCGAA
CCCGCGCTGGCCGGGGCGAC

Downstream 100 bases:

>100_bases
GGCGATTGCCCGACCGCGCGGATTTTTCTGGTCAGCCCGCTATCCGGTAGCCTGGGGCGGTTGCCGACGCAGGCGACCCT
CCTGCCACGGAACGACCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Isonitrile Hydratase; AraC Family Transcriptional Regulator; Transcriptional Regulator; ThiJ Family Protein; DJ-1/PfpI Superfamily Protein; Transcriptional Regulator AraC Family; DJ-1/PfpI Family; Intracellular Protease/Amidase; Transcription Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; Transcriptional Regulatory Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Twin-Arginine Translocation Pathway Signal; Transcriptional Regulator AraC Family Protein; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; Transcriptional Regulator ThiJ/PfpI Family Protein; Thij/Pfpi Family Protein; ThiH/PfpI Family Amidotransferase; Transcriptional Regulator Protein

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTLIAIPLFPRVTTLDAVGPYEVLQRIPSVQVVFVGQRRGEVRTENGMLGLACDATFDEVSAPDVVVFPGGIGTRQLIHD
EAVRAWLQAVHPHTRFTTSVCTGALLLAAAGLLDGLTATTHWRAADLLNGLGARYVEQRVVEHLPQRIITAAGVSSGIDM
ALRLVELLVDRQAAQAAQLLIEYDPQPPFDSGAFGKADAATVARAEEYLTGRR

Sequences:

>Translated_213_residues
MTLIAIPLFPRVTTLDAVGPYEVLQRIPSVQVVFVGQRRGEVRTENGMLGLACDATFDEVSAPDVVVFPGGIGTRQLIHD
EAVRAWLQAVHPHTRFTTSVCTGALLLAAAGLLDGLTATTHWRAADLLNGLGARYVEQRVVEHLPQRIITAAGVSSGIDM
ALRLVELLVDRQAAQAAQLLIEYDPQPPFDSGAFGKADAATVARAEEYLTGRR
>Mature_212_residues
TLIAIPLFPRVTTLDAVGPYEVLQRIPSVQVVFVGQRRGEVRTENGMLGLACDATFDEVSAPDVVVFPGGIGTRQLIHDE
AVRAWLQAVHPHTRFTTSVCTGALLLAAAGLLDGLTATTHWRAADLLNGLGARYVEQRVVEHLPQRIITAAGVSSGIDMA
LRLVELLVDRQAAQAAQLLIEYDPQPPFDSGAFGKADAATVARAEEYLTGRR

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22907; Mature: 22775

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLIAIPLFPRVTTLDAVGPYEVLQRIPSVQVVFVGQRRGEVRTENGMLGLACDATFDEV
CEEEEEECCCCHHHHCCCCHHHHHHHCCCEEEEEEECCCCCEECCCCCEEEEECCCHHHC
SAPDVVVFPGGIGTRQLIHDEAVRAWLQAVHPHTRFTTSVCTGALLLAAAGLLDGLTATT
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
HWRAADLLNGLGARYVEQRVVEHLPQRIITAAGVSSGIDMALRLVELLVDRQAAQAAQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IEYDPQPPFDSGAFGKADAATVARAEEYLTGRR
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLIAIPLFPRVTTLDAVGPYEVLQRIPSVQVVFVGQRRGEVRTENGMLGLACDATFDEV
EEEEEECCCCHHHHCCCCHHHHHHHCCCEEEEEEECCCCCEECCCCCEEEEECCCHHHC
SAPDVVVFPGGIGTRQLIHDEAVRAWLQAVHPHTRFTTSVCTGALLLAAAGLLDGLTATT
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
HWRAADLLNGLGARYVEQRVVEHLPQRIITAAGVSSGIDMALRLVELLVDRQAAQAAQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IEYDPQPPFDSGAFGKADAATVARAEEYLTGRR
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA