| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406125
Identifier: 41406125
GI number: 41406125
Start: 29619
End: 31517
Strand: Direct
Name: 41406125
Synonym: MAP0027
Alternate gene names: NA
Gene position: 29619-31517 (Clockwise)
Preceding gene: 41406124
Following gene: 41406132
Centisome position: 0.61
GC content: 65.67
Gene sequence:
>1899_bases ATGGGACTCCCGTACATAGATAAGCAGGCGCTGATCGCCGAAGCAGGCGGTGACCCGTGGGCGATCAATGCGAGCCTGCA GGCGGGCAGCCCATCACAGATCTCCAACCTGGCCGGGGCCTTTCACCGCGCGGGCCGCTGCACGCAGGAAGCCGATAACG CGTTCCAGCAAGCCCGGTCACGATTCGACGCGGCCTGGAATCACCAGGACGGCGATCATCCCATCAACGACTCCGAGGAA GTGCAACGCGTCACGAAAGCCCTTGGGGCCCAGTCCTTGCAGCTGCCCAAGATCGGCGCCGACCTGGAAGGCATTGCCGC CGCGCTGGCCGAGGCGCAGAAAGCGGGTGCGGCGCGGATCGCCACCCTGGATGCCCAGTTGAAGAACATTTCCGACCTGG TGGTCGAGGCGGTCGCCCTATTGAACGACAAGAGCCTCAGTCCGGCTGACCGGGATGCGCTGCATGCCCTCATCAACACA TGCGAGAACGACGCCCTGCGCCACACCAAGGCGGCCCTGGCTGATCTGCAAGCGATCCGCAACGGCTACGCCGACGGGCT GCAAAAGTCGTTGAACAGCCTGCACGCCGAAGGGTATGACGGCGCGCCCCTCCATGGTGTCGACGCCGACGGCGTCGCCC CGGCCTCTCCGGCCCAACAGGCCGCCTTGGATGACATTCGCCGGGCCACCAATCAGGCCGTCCTGGACCAGATGGCCAAG GTGCGTGCCGCGCAGCGGGCTCTGGACAAGGCGATGGCCGACGTTTATGCCCACGGGCCCGGCTCGCCGGAAGGCGAGGC CGCCAGCGCCCAGCTACCCAAGCTCAAGGCCGATCTCGCCCATGCGCTCGACGACCTGGGCAAGATTCCCGACTACACCG GCATCGACCCCGCGTCGGTGAATGTCACGCCCGATGGCCACTTCATGTTCACCTACAACGTCAACGGGCAGCCCGTACAG GTTGTCGGCCAGCTCAAGCACGGGACGGGCGAATTCTTCGACCAGGCCACCGGCACGTACTACACCTTCAACGGCGGCAA GTTGACCGGAATGCGCACGCCCGATCCGGGGAAGGTGGAAGCCACCTCCGAGCCCTTGTGGACCGCCATCACGACCGCGG TAGGCGGATACGGACTCAAGGTGGGCGGTACTGCCGCTTGGCAAGGCCTGAAAACGCTATTCAGCCGGGAGATGTTGGAC GGATTGACGAGCGAGAACGTTATCTCCCGGGCGATGACGGGGGCTGAGGTGCGTGCGGCGCTCGCTGAGGCCGAGTACCC GCGCGGCATCGGCGGCGAGGCCGTTCCCAGTACCCATCCGCTTGAGCCTCCTCCCGTGGAGCACACTCCCCCGGCCGATG CACCCGTCGAACATGCGCCCGGTGGGCCGCACGTCGCCGTGCCCGACAGTCCGCCGCCTTTACCGCCGGAACAGCCGCCG CCACCCCCGCTTGCCTCGGACCATCCGCTCTTCGAGGGATACCATCCGATCGATCCCGGCCCGGAATTCACCAACGCCGA CGGCAGCCTGCGATATCCCGACGACACGTTGCCGACCAAGCCGTACGCGGTACCCGGGACGGTCGTCCCGGATGCTCAGT TGTCGGCTGGGACAGTTCTGAGCCGATTCGGGTTTCCCGGTGGCGGATACCTGGCCCCCGAAGGAACACCGTTCGCCGAA CTGGCACTCCCACCAGGAAGCGCCGGCAAGCCGTACTTTCAATATGTGGTCGACGACCCGACCCGCCTTCCGCCCGGGTG GCACATTGAGCAGTCGGAGGTGGCGCCGTGGTTTCATCAGCCCGGCGGCGGTCAGCAGTACCGCATTATTAACGAAGAGG GAGAGACGGGCGATGTCGCGGAATTGGTCAGGTGGGGCTACTTGAGAAGGATTAACTAA
Upstream 100 bases:
>100_bases GCGCCCGCGCCAGTACCCTCATGAGCAGTTTGGGAGGGTTGCAGATGCGCGTCAGCACGCGGCGCCGGTGTGGCGATGAG CGCTCGGCCGCGAAGGTGCC
Downstream 100 bases:
>100_bases TGGTCGATTTCTCGCGCTTGTCAGTCAATTGGCATCGGTGGGGACCCGCAATAGGTGGCGGTAATATCGGCGTCACCACA GAGTGCGAAGACTGTACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 632; Mature: 631
Protein sequence:
>632_residues MGLPYIDKQALIAEAGGDPWAINASLQAGSPSQISNLAGAFHRAGRCTQEADNAFQQARSRFDAAWNHQDGDHPINDSEE VQRVTKALGAQSLQLPKIGADLEGIAAALAEAQKAGAARIATLDAQLKNISDLVVEAVALLNDKSLSPADRDALHALINT CENDALRHTKAALADLQAIRNGYADGLQKSLNSLHAEGYDGAPLHGVDADGVAPASPAQQAALDDIRRATNQAVLDQMAK VRAAQRALDKAMADVYAHGPGSPEGEAASAQLPKLKADLAHALDDLGKIPDYTGIDPASVNVTPDGHFMFTYNVNGQPVQ VVGQLKHGTGEFFDQATGTYYTFNGGKLTGMRTPDPGKVEATSEPLWTAITTAVGGYGLKVGGTAAWQGLKTLFSREMLD GLTSENVISRAMTGAEVRAALAEAEYPRGIGGEAVPSTHPLEPPPVEHTPPADAPVEHAPGGPHVAVPDSPPPLPPEQPP PPPLASDHPLFEGYHPIDPGPEFTNADGSLRYPDDTLPTKPYAVPGTVVPDAQLSAGTVLSRFGFPGGGYLAPEGTPFAE LALPPGSAGKPYFQYVVDDPTRLPPGWHIEQSEVAPWFHQPGGGQQYRIINEEGETGDVAELVRWGYLRRIN
Sequences:
>Translated_632_residues MGLPYIDKQALIAEAGGDPWAINASLQAGSPSQISNLAGAFHRAGRCTQEADNAFQQARSRFDAAWNHQDGDHPINDSEE VQRVTKALGAQSLQLPKIGADLEGIAAALAEAQKAGAARIATLDAQLKNISDLVVEAVALLNDKSLSPADRDALHALINT CENDALRHTKAALADLQAIRNGYADGLQKSLNSLHAEGYDGAPLHGVDADGVAPASPAQQAALDDIRRATNQAVLDQMAK VRAAQRALDKAMADVYAHGPGSPEGEAASAQLPKLKADLAHALDDLGKIPDYTGIDPASVNVTPDGHFMFTYNVNGQPVQ VVGQLKHGTGEFFDQATGTYYTFNGGKLTGMRTPDPGKVEATSEPLWTAITTAVGGYGLKVGGTAAWQGLKTLFSREMLD GLTSENVISRAMTGAEVRAALAEAEYPRGIGGEAVPSTHPLEPPPVEHTPPADAPVEHAPGGPHVAVPDSPPPLPPEQPP PPPLASDHPLFEGYHPIDPGPEFTNADGSLRYPDDTLPTKPYAVPGTVVPDAQLSAGTVLSRFGFPGGGYLAPEGTPFAE LALPPGSAGKPYFQYVVDDPTRLPPGWHIEQSEVAPWFHQPGGGQQYRIINEEGETGDVAELVRWGYLRRIN >Mature_631_residues GLPYIDKQALIAEAGGDPWAINASLQAGSPSQISNLAGAFHRAGRCTQEADNAFQQARSRFDAAWNHQDGDHPINDSEEV QRVTKALGAQSLQLPKIGADLEGIAAALAEAQKAGAARIATLDAQLKNISDLVVEAVALLNDKSLSPADRDALHALINTC ENDALRHTKAALADLQAIRNGYADGLQKSLNSLHAEGYDGAPLHGVDADGVAPASPAQQAALDDIRRATNQAVLDQMAKV RAAQRALDKAMADVYAHGPGSPEGEAASAQLPKLKADLAHALDDLGKIPDYTGIDPASVNVTPDGHFMFTYNVNGQPVQV VGQLKHGTGEFFDQATGTYYTFNGGKLTGMRTPDPGKVEATSEPLWTAITTAVGGYGLKVGGTAAWQGLKTLFSREMLDG LTSENVISRAMTGAEVRAALAEAEYPRGIGGEAVPSTHPLEPPPVEHTPPADAPVEHAPGGPHVAVPDSPPPLPPEQPPP PPLASDHPLFEGYHPIDPGPEFTNADGSLRYPDDTLPTKPYAVPGTVVPDAQLSAGTVLSRFGFPGGGYLAPEGTPFAEL ALPPGSAGKPYFQYVVDDPTRLPPGWHIEQSEVAPWFHQPGGGQQYRIINEEGETGDVAELVRWGYLRRIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010427 [H]
Pfam domain/function: PF06259 DUF1023 [H]
EC number: NA
Molecular weight: Translated: 66579; Mature: 66447
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPYIDKQALIAEAGGDPWAINASLQAGSPSQISNLAGAFHRAGRCTQEADNAFQQARS CCCCCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RFDAAWNHQDGDHPINDSEEVQRVTKALGAQSLQLPKIGADLEGIAAALAEAQKAGAARI HHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE ATLDAQLKNISDLVVEAVALLNDKSLSPADRDALHALINTCENDALRHTKAALADLQAIR EEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGYADGLQKSLNSLHAEGYDGAPLHGVDADGVAPASPAQQAALDDIRRATNQAVLDQMAK HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VRAAQRALDKAMADVYAHGPGSPEGEAASAQLPKLKADLAHALDDLGKIPDYTGIDPASV HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEE NVTPDGHFMFTYNVNGQPVQVVGQLKHGTGEFFDQATGTYYTFNGGKLTGMRTPDPGKVE EECCCCEEEEEEECCCCCEEEEEEHHCCCHHHHHCCCCCEEEECCCEEECCCCCCCCCEE ATSEPLWTAITTAVGGYGLKVGGTAAWQGLKTLFSREMLDGLTSENVISRAMTGAEVRAA CCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH LAEAEYPRGIGGEAVPSTHPLEPPPVEHTPPADAPVEHAPGGPHVAVPDSPPPLPPEQPP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC PPPLASDHPLFEGYHPIDPGPEFTNADGSLRYPDDTLPTKPYAVPGTVVPDAQLSAGTVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH SRFGFPGGGYLAPEGTPFAELALPPGSAGKPYFQYVVDDPTRLPPGWHIEQSEVAPWFHQ HHCCCCCCCEECCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCC PGGGQQYRIINEEGETGDVAELVRWGYLRRIN CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure GLPYIDKQALIAEAGGDPWAINASLQAGSPSQISNLAGAFHRAGRCTQEADNAFQQARS CCCCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RFDAAWNHQDGDHPINDSEEVQRVTKALGAQSLQLPKIGADLEGIAAALAEAQKAGAARI HHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE ATLDAQLKNISDLVVEAVALLNDKSLSPADRDALHALINTCENDALRHTKAALADLQAIR EEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGYADGLQKSLNSLHAEGYDGAPLHGVDADGVAPASPAQQAALDDIRRATNQAVLDQMAK HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VRAAQRALDKAMADVYAHGPGSPEGEAASAQLPKLKADLAHALDDLGKIPDYTGIDPASV HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEE NVTPDGHFMFTYNVNGQPVQVVGQLKHGTGEFFDQATGTYYTFNGGKLTGMRTPDPGKVE EECCCCEEEEEEECCCCCEEEEEEHHCCCHHHHHCCCCCEEEECCCEEECCCCCCCCCEE ATSEPLWTAITTAVGGYGLKVGGTAAWQGLKTLFSREMLDGLTSENVISRAMTGAEVRAA CCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH LAEAEYPRGIGGEAVPSTHPLEPPPVEHTPPADAPVEHAPGGPHVAVPDSPPPLPPEQPP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC PPPLASDHPLFEGYHPIDPGPEFTNADGSLRYPDDTLPTKPYAVPGTVVPDAQLSAGTVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH SRFGFPGGGYLAPEGTPFAELALPPGSAGKPYFQYVVDDPTRLPPGWHIEQSEVAPWFHQ HHCCCCCCCEECCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCC PGGGQQYRIINEEGETGDVAELVRWGYLRRIN CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]