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The map label for this gene is 39998418

Identifier: 39998418

GI number: 39998418

Start: 3657542

End: 3658837

Strand: Reverse

Name: 39998418

Synonym: GSU3329

Alternate gene names: NA

Gene position: 3658837-3657542 (Counterclockwise)

Preceding gene: 39998419

Following gene: 39998417

Centisome position: 95.93

GC content: 65.28

Gene sequence:

>1296_bases
ATGGCGGAACCAACTCTGGCTGAAAAACTCGAAATCCTCGCCGACGGCGCCAAGTACGACGTTTCATGCGCCTCCAGCGG
CAGCTCCCGCAAAGGCAAGGGTGGGATCGGAAACGCCGCCCAGTGCGGCATCTGCCACTCCTGGACCGCCGACGGCCGCT
GCGTATCCCTCCTGAAGATCCTTCTCACCAACGTCTGCATCTATGACTGTGCCTACTGCGTGAACCGTCGCTCCAACGAC
ATCCGGCGGGTGATGCTCACTCCCGCCGAGGTGGCGGAGCTCACCATCGGCTTTTACCGCCGCAATGCCATCGAAGGGCT
CTTCCTCTCCACCGGGGTCATCAGGAATCCCGACTACACCATGGAGCTTCTCATCGAAGCGACCCGGCAGCTGCGCGAGG
AGTACCGCTTCAACGGCTACATCCACGTAAAGGTGGTGCCCGGCGCGGACCTCGCCCTGGTGGAGCGACTCGGTCGCCAT
GCCGACCGGGTCAGTATCAACATGGAACTCCCGTCGCGCGAGAGCCTTGCACTCCTGGCGCCCGACAAAAGCAGGGAGTC
GATCGTGGGGCCCATGAAGCGAGTGGGGGAGCTGATCGTCCAGACCCGGGAGGAGCGCAAGGTTTCCCGGAAGATGCCCC
CCTTTGCCCCGGCCGGGCAGAGCACCCAGCTCATCGTCGGCGCATCGGGGGAGACTGACCTGCAGATCATTTCGCTGGCG
GCGGGGCTTTACGGAAGGCTTTCCCTGAAGCGGGTCTACTACTCTGCCTTCATCTCCGTGAACCGGGACGAGCGCCTTCC
CGCCGTGGTGGGCACCCCACCGCTCGCGCGGGAACACCGCCTCTACCAGGCCGACTGGCTCATGCGCTACTATGGCTTCG
CCGCCGGCGAGCTCCTGGACGAAGAGCGCCCCAACCTGGATCTCTCGCTGGACCCCAAGGCTGGGTGGGCGCTCCGAAAT
CTTCACCTGTTCCCCGTCGAGGTGAATCGGGCCGACTACGAGGCGCTCCTTCGGGTGCCGGGAATCGGGGTCCGCTCGGC
CCAGCGGATCGTCTTGGCGCGGCGGGGCAGCCATCTGTCCCTGGATGACCTGCCCAGGCTCGGGGTGGTGATGAAGCGCG
CCCGCTACTTCATTACCGCCCGAGGGAGGTTCGCCGCCGATCTGACTCCCGATGCGGCAGGCCTCCGGCTGCGTCTCACC
GAAAAACCACTTCGGCGCGAGCGCTGGAGCCAGCCGTCCCTGTTCGACGGTGGGGCCGGCATGGACATTCGGTCCACCAT
CACGGGTGAGTTGTGA

Upstream 100 bases:

>100_bases
GGGAGAGCCGGGAGTTTTCTCTGTAACGGGAGGAATGCGACGTATTCCGTCATGGGTCCGGGAGAGGATTGCCCGGGCCT
TGCCTTTTTTGAGGGGAACG

Downstream 100 bases:

>100_bases
TCCTTCGTTACGACGGCACCTTTGCGGGCTTCCTCACGGCTGTTGCCTTGGCCCGGGAACGGGGAGTAGAGCCCGAGGCG
ATTATCGACCAACAACCGGA

Product: radical SAM protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MAEPTLAEKLEILADGAKYDVSCASSGSSRKGKGGIGNAAQCGICHSWTADGRCVSLLKILLTNVCIYDCAYCVNRRSND
IRRVMLTPAEVAELTIGFYRRNAIEGLFLSTGVIRNPDYTMELLIEATRQLREEYRFNGYIHVKVVPGADLALVERLGRH
ADRVSINMELPSRESLALLAPDKSRESIVGPMKRVGELIVQTREERKVSRKMPPFAPAGQSTQLIVGASGETDLQIISLA
AGLYGRLSLKRVYYSAFISVNRDERLPAVVGTPPLAREHRLYQADWLMRYYGFAAGELLDEERPNLDLSLDPKAGWALRN
LHLFPVEVNRADYEALLRVPGIGVRSAQRIVLARRGSHLSLDDLPRLGVVMKRARYFITARGRFAADLTPDAAGLRLRLT
EKPLRRERWSQPSLFDGGAGMDIRSTITGEL

Sequences:

>Translated_431_residues
MAEPTLAEKLEILADGAKYDVSCASSGSSRKGKGGIGNAAQCGICHSWTADGRCVSLLKILLTNVCIYDCAYCVNRRSND
IRRVMLTPAEVAELTIGFYRRNAIEGLFLSTGVIRNPDYTMELLIEATRQLREEYRFNGYIHVKVVPGADLALVERLGRH
ADRVSINMELPSRESLALLAPDKSRESIVGPMKRVGELIVQTREERKVSRKMPPFAPAGQSTQLIVGASGETDLQIISLA
AGLYGRLSLKRVYYSAFISVNRDERLPAVVGTPPLAREHRLYQADWLMRYYGFAAGELLDEERPNLDLSLDPKAGWALRN
LHLFPVEVNRADYEALLRVPGIGVRSAQRIVLARRGSHLSLDDLPRLGVVMKRARYFITARGRFAADLTPDAAGLRLRLT
EKPLRRERWSQPSLFDGGAGMDIRSTITGEL
>Mature_430_residues
AEPTLAEKLEILADGAKYDVSCASSGSSRKGKGGIGNAAQCGICHSWTADGRCVSLLKILLTNVCIYDCAYCVNRRSNDI
RRVMLTPAEVAELTIGFYRRNAIEGLFLSTGVIRNPDYTMELLIEATRQLREEYRFNGYIHVKVVPGADLALVERLGRHA
DRVSINMELPSRESLALLAPDKSRESIVGPMKRVGELIVQTREERKVSRKMPPFAPAGQSTQLIVGASGETDLQIISLAA
GLYGRLSLKRVYYSAFISVNRDERLPAVVGTPPLAREHRLYQADWLMRYYGFAAGELLDEERPNLDLSLDPKAGWALRNL
HLFPVEVNRADYEALLRVPGIGVRSAQRIVLARRGSHLSLDDLPRLGVVMKRARYFITARGRFAADLTPDAAGLRLRLTE
KPLRRERWSQPSLFDGGAGMDIRSTITGEL

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47881; Mature: 47750

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPTLAEKLEILADGAKYDVSCASSGSSRKGKGGIGNAAQCGICHSWTADGRCVSLLKI
CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHH
LLTNVCIYDCAYCVNRRSNDIRRVMLTPAEVAELTIGFYRRNAIEGLFLSTGVIRNPDYT
HHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCEEEEECCEEECCCHH
MELLIEATRQLREEYRFNGYIHVKVVPGADLALVERLGRHADRVSINMELPSRESLALLA
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCEEEEC
PDKSRESIVGPMKRVGELIVQTREERKVSRKMPPFAPAGQSTQLIVGASGETDLQIISLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEHEEHH
AGLYGRLSLKRVYYSAFISVNRDERLPAVVGTPPLAREHRLYQADWLMRYYGFAAGELLD
HHHHHHHHHHHHEEEHHEECCCCCCCCEEECCCCCCHHCCHHHHHHHHHHHCCHHHHHHH
EERPNLDLSLDPKAGWALRNLHLFPVEVNRADYEALLRVPGIGVRSAQRIVLARRGSHLS
CCCCCCCEEECCCCCCEEECEEEEEEEECCCCHHHHHHCCCCCCCHHHEEEEEECCCCCC
LDDLPRLGVVMKRARYFITARGRFAADLTPDAAGLRLRLTEKPLRRERWSQPSLFDGGAG
HHHCCHHHHHHHHHEEEEEECCCEEECCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCC
MDIRSTITGEL
CEEHHHCCCCC
>Mature Secondary Structure 
AEPTLAEKLEILADGAKYDVSCASSGSSRKGKGGIGNAAQCGICHSWTADGRCVSLLKI
CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHH
LLTNVCIYDCAYCVNRRSNDIRRVMLTPAEVAELTIGFYRRNAIEGLFLSTGVIRNPDYT
HHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCEEEEECCEEECCCHH
MELLIEATRQLREEYRFNGYIHVKVVPGADLALVERLGRHADRVSINMELPSRESLALLA
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCEEEEC
PDKSRESIVGPMKRVGELIVQTREERKVSRKMPPFAPAGQSTQLIVGASGETDLQIISLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEHEEHH
AGLYGRLSLKRVYYSAFISVNRDERLPAVVGTPPLAREHRLYQADWLMRYYGFAAGELLD
HHHHHHHHHHHHEEEHHEECCCCCCCCEEECCCCCCHHCCHHHHHHHHHHHCCHHHHHHH
EERPNLDLSLDPKAGWALRNLHLFPVEVNRADYEALLRVPGIGVRSAQRIVLARRGSHLS
CCCCCCCEEECCCCCCEEECEEEEEEEECCCCHHHHHHCCCCCCCHHHEEEEEECCCCCC
LDDLPRLGVVMKRARYFITARGRFAADLTPDAAGLRLRLTEKPLRRERWSQPSLFDGGAG
HHHCCHHHHHHHHHEEEEEECCCEEECCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCC
MDIRSTITGEL
CEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA