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The map label for this gene is 39998402

Identifier: 39998402

GI number: 39998402

Start: 3637191

End: 3638798

Strand: Reverse

Name: 39998402

Synonym: GSU3313

Alternate gene names: NA

Gene position: 3638798-3637191 (Counterclockwise)

Preceding gene: 39998403

Following gene: 39998401

Centisome position: 95.4

GC content: 65.3

Gene sequence:

>1608_bases
ATGCGACATATTCCCTTCAGTCCACGGCCGGTCTACGTGGCCGCATCCTGGATGGCGCCGGTGGGGCGCTACGACGGCAG
ACACCGCGCCCGGCTTTCGTTCCTGGAGATGGCAGAGCTGGCCGGGGCGGTTTTCGAAGGATGCCCCGTGCGACCCCGCG
ACATCGAGGCCGTGGTGGTCGGCTCCCAGAGCCCGGTCGCCTTTTCCGGGGTCGACAATACCGCGGCCAAGATCGCAGGC
GTGGTCGGCGTTTCCGGCGCCAAATCGGTGCTGATCGACACCGCATCCTCGTCGGGAGCCTCGGCCTTTGAGAACGCCTG
CCTCCAGATCGCCTCGGGCCGCTGCGACCATGTGCTCGCCATCGGCATCCAGAAGATGAGCGATGCCCCCACCGCCGAGG
CAACCCGCATCGTGGCCGGAGTCATCGACCGGGACGAAGCCGAGTTCGGGCTGACCATGCCGGCCTGCGGAGCTCTGGTG
GCCCGCGCCCTGATGGAGCGGTACGGGCTCTCGTTTGAGGAGTGGACCGCCTTTTCGGCTCTGCTGACCCAGCGGGCCCA
CCGCTATGCGGCCCTGAATCCCGACGCTCACCTGAGCGCGGAGATCCCCTTGGAGGAGTACTACCGCCAGATCGTCACCG
GCAAGAACTATCCCTACTGGTGGCCCCTGCGCTACCACGACTTCTGCCCCATGTCAGACGGGGTGGCCGCCGTGGTCCTC
ACCAGCGATCCCCAGGATGTGATGGTGTCCGGGGTGGGAAGCGCCACCGATATTCCCACCATTGCCGACCGCAACTACTT
TCATTCCTTTCCCGCCACCGTTTCCGCCGCGGCGGAGGCGTACGGCATGGCCGGGATCAGGGACATCCGGCAGTTCGCCG
GCAAGATCCACGTGAACATGCATGACCCCTTCAACGGCTTCGGCCCCATCAATCTGGTGGACCTGGGCTTCGTCCCCCGT
GGCCGCCTCCTGGATGCCCTGTTGGATGACGGCTATACCGGCGAGAACGGCCCCTTTCCCACCAACCTCACCGGCGGGCT
CAAGGGGAGGGGACACCCCCTTGGCGCCACCGGCATGATCCAGGTGGTGGAGAATCACCGCATGATCAGGGAGGGGCGTT
TCACGGCCGGTCTTTCCCACTCCATCGGCGGCCCCATCAACAACAACATCGTCATTCTGCTGGAACGGAGCAACCACTAT
AGGCACCGGCCCCACGAACCGTTCAAGCCCTGGGGGCTCCCCTCCTTGGGGCACCTCAAGCCCCGGCAGGTGACGGTCGA
AAACCTCCTGGCCGCCACCGGGTCGGTCGAGGGAACCTTTGTCAGCGGTACCGTGCGCTACCACTTCAAGACGGGTGAGC
CCGAACTGATCATCCTGATCGTTGCCTGCCGGGCGGCCGATGGGCGCCAGTATCGCTTTCTGTTCGGCATTGGCGGCGAA
AATCACGAGAACTTCATCGCCCTCACGCCGGGGGATCGGGTCAGGCTGGAGCGGAGCGAGGGGCATATCCTCGTCAACCG
GATGCCGGTCAGGAAGTTCTACCAGCGGACCATGGACGGCCTGGTTGACCTGGCATCCAGCGGGTGGAAGGTCATCCGGG
GGAAGTGA

Upstream 100 bases:

>100_bases
TAATGGCGCGGGCCTTTTGCATTTCAGTTGCCCCGGCAGGAACATGGTTTACAATAAGGGCACGATCACACCATCTCCCG
GCGGGAGAAACGGAGTTCCC

Downstream 100 bases:

>100_bases
CAGGGGTAGGCACCCCGTTTCCGCCTTGACCGCAGTCGTTCATTAGGGTATCAGGGAGGAAGATGTGGGTGTCATGAAAT
TGTCCGTTTGCCATGCCGGA

Product: thiolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MRHIPFSPRPVYVAASWMAPVGRYDGRHRARLSFLEMAELAGAVFEGCPVRPRDIEAVVVGSQSPVAFSGVDNTAAKIAG
VVGVSGAKSVLIDTASSSGASAFENACLQIASGRCDHVLAIGIQKMSDAPTAEATRIVAGVIDRDEAEFGLTMPACGALV
ARALMERYGLSFEEWTAFSALLTQRAHRYAALNPDAHLSAEIPLEEYYRQIVTGKNYPYWWPLRYHDFCPMSDGVAAVVL
TSDPQDVMVSGVGSATDIPTIADRNYFHSFPATVSAAAEAYGMAGIRDIRQFAGKIHVNMHDPFNGFGPINLVDLGFVPR
GRLLDALLDDGYTGENGPFPTNLTGGLKGRGHPLGATGMIQVVENHRMIREGRFTAGLSHSIGGPINNNIVILLERSNHY
RHRPHEPFKPWGLPSLGHLKPRQVTVENLLAATGSVEGTFVSGTVRYHFKTGEPELIILIVACRAADGRQYRFLFGIGGE
NHENFIALTPGDRVRLERSEGHILVNRMPVRKFYQRTMDGLVDLASSGWKVIRGK

Sequences:

>Translated_535_residues
MRHIPFSPRPVYVAASWMAPVGRYDGRHRARLSFLEMAELAGAVFEGCPVRPRDIEAVVVGSQSPVAFSGVDNTAAKIAG
VVGVSGAKSVLIDTASSSGASAFENACLQIASGRCDHVLAIGIQKMSDAPTAEATRIVAGVIDRDEAEFGLTMPACGALV
ARALMERYGLSFEEWTAFSALLTQRAHRYAALNPDAHLSAEIPLEEYYRQIVTGKNYPYWWPLRYHDFCPMSDGVAAVVL
TSDPQDVMVSGVGSATDIPTIADRNYFHSFPATVSAAAEAYGMAGIRDIRQFAGKIHVNMHDPFNGFGPINLVDLGFVPR
GRLLDALLDDGYTGENGPFPTNLTGGLKGRGHPLGATGMIQVVENHRMIREGRFTAGLSHSIGGPINNNIVILLERSNHY
RHRPHEPFKPWGLPSLGHLKPRQVTVENLLAATGSVEGTFVSGTVRYHFKTGEPELIILIVACRAADGRQYRFLFGIGGE
NHENFIALTPGDRVRLERSEGHILVNRMPVRKFYQRTMDGLVDLASSGWKVIRGK
>Mature_535_residues
MRHIPFSPRPVYVAASWMAPVGRYDGRHRARLSFLEMAELAGAVFEGCPVRPRDIEAVVVGSQSPVAFSGVDNTAAKIAG
VVGVSGAKSVLIDTASSSGASAFENACLQIASGRCDHVLAIGIQKMSDAPTAEATRIVAGVIDRDEAEFGLTMPACGALV
ARALMERYGLSFEEWTAFSALLTQRAHRYAALNPDAHLSAEIPLEEYYRQIVTGKNYPYWWPLRYHDFCPMSDGVAAVVL
TSDPQDVMVSGVGSATDIPTIADRNYFHSFPATVSAAAEAYGMAGIRDIRQFAGKIHVNMHDPFNGFGPINLVDLGFVPR
GRLLDALLDDGYTGENGPFPTNLTGGLKGRGHPLGATGMIQVVENHRMIREGRFTAGLSHSIGGPINNNIVILLERSNHY
RHRPHEPFKPWGLPSLGHLKPRQVTVENLLAATGSVEGTFVSGTVRYHFKTGEPELIILIVACRAADGRQYRFLFGIGGE
NHENFIALTPGDRVRLERSEGHILVNRMPVRKFYQRTMDGLVDLASSGWKVIRGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI19923233, Length=334, Percent_Identity=24.251497005988, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI302344760, Length=307, Percent_Identity=24.4299674267101, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI302344762, Length=294, Percent_Identity=25.1700680272109, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002155
- InterPro:   IPR016039
- InterPro:   IPR016038
- InterPro:   IPR020617
- InterPro:   IPR020616 [H]

Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]

EC number: NA

Molecular weight: Translated: 58201; Mature: 58201

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHIPFSPRPVYVAASWMAPVGRYDGRHRARLSFLEMAELAGAVFEGCPVRPRDIEAVVV
CCCCCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
GSQSPVAFSGVDNTAAKIAGVVGVSGAKSVLIDTASSSGASAFENACLQIASGRCDHVLA
CCCCCEEEECCCCHHHHHHHHEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEE
IGIQKMSDAPTAEATRIVAGVIDRDEAEFGLTMPACGALVARALMERYGLSFEEWTAFSA
EEHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
LLTQRAHRYAALNPDAHLSAEIPLEEYYRQIVTGKNYPYWWPLRYHDFCPMSDGVAAVVL
HHHHHHHHEEECCCCCCEEEECCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEE
TSDPQDVMVSGVGSATDIPTIADRNYFHSFPATVSAAAEAYGMAGIRDIRQFAGKIHVNM
ECCCHHHHEECCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCHHHHHHHHHHCEEEEEE
HDPFNGFGPINLVDLGFVPRGRLLDALLDDGYTGENGPFPTNLTGGLKGRGHPLGATGMI
CCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QVVENHRMIREGRFTAGLSHSIGGPINNNIVILLERSNHYRHRPHEPFKPWGLPSLGHLK
HHHHHCHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PRQVTVENLLAATGSVEGTFVSGTVRYHFKTGEPELIILIVACRAADGRQYRFLFGIGGE
CCEEHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCC
NHENFIALTPGDRVRLERSEGHILVNRMPVRKFYQRTMDGLVDLASSGWKVIRGK
CCCCEEEECCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MRHIPFSPRPVYVAASWMAPVGRYDGRHRARLSFLEMAELAGAVFEGCPVRPRDIEAVVV
CCCCCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
GSQSPVAFSGVDNTAAKIAGVVGVSGAKSVLIDTASSSGASAFENACLQIASGRCDHVLA
CCCCCEEEECCCCHHHHHHHHEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEE
IGIQKMSDAPTAEATRIVAGVIDRDEAEFGLTMPACGALVARALMERYGLSFEEWTAFSA
EEHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
LLTQRAHRYAALNPDAHLSAEIPLEEYYRQIVTGKNYPYWWPLRYHDFCPMSDGVAAVVL
HHHHHHHHEEECCCCCCEEEECCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEE
TSDPQDVMVSGVGSATDIPTIADRNYFHSFPATVSAAAEAYGMAGIRDIRQFAGKIHVNM
ECCCHHHHEECCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCHHHHHHHHHHCEEEEEE
HDPFNGFGPINLVDLGFVPRGRLLDALLDDGYTGENGPFPTNLTGGLKGRGHPLGATGMI
CCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QVVENHRMIREGRFTAGLSHSIGGPINNNIVILLERSNHYRHRPHEPFKPWGLPSLGHLK
HHHHHCHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PRQVTVENLLAATGSVEGTFVSGTVRYHFKTGEPELIILIVACRAADGRQYRFLFGIGGE
CCEEHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCC
NHENFIALTPGDRVRLERSEGHILVNRMPVRKFYQRTMDGLVDLASSGWKVIRGK
CCCCEEEECCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]