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The map label for this gene is tmk [H]

Identifier: 39998390

GI number: 39998390

Start: 3624159

End: 3624794

Strand: Direct

Name: tmk [H]

Synonym: GSU3301

Alternate gene names: 39998390

Gene position: 3624159-3624794 (Clockwise)

Preceding gene: 308513342

Following gene: 39998391

Centisome position: 95.02

GC content: 54.87

Gene sequence:

>636_bases
GTGAGAAAAGGGAAACTGATCGTTATCGAGGGAATCAGCGGCTCCGGCCAGCAGGTCAAGGCAGGCATCGTGGCGCTCCA
CAACACCCTCGTGGAGAACAAGTACGATGTCGTCGAATGCGCCAATCCAGATTCCGGGCGGGCAAAGGAACTGGGAATCA
CCAATCTGCTCAACTGGCCCTTCGGCAGGACTCCCCGGGCCGACTTCCTGTTCGAGAGTGCGGTCCGGACCGAAGTATTC
AAGAATGTCGTTGAGCCTGCGCTGCAACAGGACAAGATAGTCCTCTGCAAACAATCGAGCGTCTCATCCCTGGCAAACGC
CTGGGTCAGCGGTTACACCAAGCATTTCGATGTCCTGCGTCATATCGACAAGATTTCCAGGGGATTTCTCTTCGAGGATG
AAATTTTTCCGGACCTGACCATCTTCATCGACGTGCCGGCCCAGGAAGCCTTCGAGCGGATCGAGGATGTTCTGCAGATA
CACCACGAGGGGGGAATCGACTACTACAACCAGATGCGCGAGTTCTATCTCAAGGAAATTTCCCGGTGGCGCGGTGTCAG
AATCGACGCCTCCGCCGGCAGGCATCCTGAAATAATCAATGCCGAAATCTGGGACGTGGTCAAAAAAATCCTCTAG

Upstream 100 bases:

>100_bases
GCAGGACGCCAGCGGCACCGCACGCCATGGAGTCCGCAGGCACGATTCTGGCGCCGCACAGCCCCGACGAATACCACTTA
CCGCTATTGAGGAGGATACC

Downstream 100 bases:

>100_bases
GGCACGCCCATGCACCACACCGCAGCTCTGACGCCCCGGACGGGGCGTCTCTGCGTACGGTGCTATGACTCTGCAGAGCA
CTCAGAGACTCCCAACGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: dTMP kinase [H]

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MRKGKLIVIEGISGSGQQVKAGIVALHNTLVENKYDVVECANPDSGRAKELGITNLLNWPFGRTPRADFLFESAVRTEVF
KNVVEPALQQDKIVLCKQSSVSSLANAWVSGYTKHFDVLRHIDKISRGFLFEDEIFPDLTIFIDVPAQEAFERIEDVLQI
HHEGGIDYYNQMREFYLKEISRWRGVRIDASAGRHPEIINAEIWDVVKKIL

Sequences:

>Translated_211_residues
MRKGKLIVIEGISGSGQQVKAGIVALHNTLVENKYDVVECANPDSGRAKELGITNLLNWPFGRTPRADFLFESAVRTEVF
KNVVEPALQQDKIVLCKQSSVSSLANAWVSGYTKHFDVLRHIDKISRGFLFEDEIFPDLTIFIDVPAQEAFERIEDVLQI
HHEGGIDYYNQMREFYLKEISRWRGVRIDASAGRHPEIINAEIWDVVKKIL
>Mature_211_residues
MRKGKLIVIEGISGSGQQVKAGIVALHNTLVENKYDVVECANPDSGRAKELGITNLLNWPFGRTPRADFLFESAVRTEVF
KNVVEPALQQDKIVLCKQSSVSSLANAWVSGYTKHFDVLRHIDKISRGFLFEDEIFPDLTIFIDVPAQEAFERIEDVLQI
HHEGGIDYYNQMREFYLKEISRWRGVRIDASAGRHPEIINAEIWDVVKKIL

Specific function: Unknown

COG id: COG0125

COG function: function code F; Thymidylate kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thymidylate kinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018095
- InterPro:   IPR018094 [H]

Pfam domain/function: PF02223 Thymidylate_kin [H]

EC number: =2.7.4.9 [H]

Molecular weight: Translated: 24012; Mature: 24012

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGKLIVIEGISGSGQQVKAGIVALHNTLVENKYDVVECANPDSGRAKELGITNLLNWP
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCHHHHHCCC
FGRTPRADFLFESAVRTEVFKNVVEPALQQDKIVLCKQSSVSSLANAWVSGYTKHFDVLR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
HIDKISRGFLFEDEIFPDLTIFIDVPAQEAFERIEDVLQIHHEGGIDYYNQMREFYLKEI
HHHHHHHCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SRWRGVRIDASAGRHPEIINAEIWDVVKKIL
HHHCCEEEECCCCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MRKGKLIVIEGISGSGQQVKAGIVALHNTLVENKYDVVECANPDSGRAKELGITNLLNWP
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCHHHHHCCC
FGRTPRADFLFESAVRTEVFKNVVEPALQQDKIVLCKQSSVSSLANAWVSGYTKHFDVLR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
HIDKISRGFLFEDEIFPDLTIFIDVPAQEAFERIEDVLQIHHEGGIDYYNQMREFYLKEI
HHHHHHHCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SRWRGVRIDASAGRHPEIINAEIWDVVKKIL
HHHCCEEEECCCCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA