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The map label for this gene is 39998365

Identifier: 39998365

GI number: 39998365

Start: 3592634

End: 3594319

Strand: Direct

Name: 39998365

Synonym: GSU3276

Alternate gene names: NA

Gene position: 3592634-3594319 (Clockwise)

Preceding gene: 308513340

Following gene: 39998368

Centisome position: 94.19

GC content: 60.97

Gene sequence:

>1686_bases
ATGGCCCTGCCATCCCGCTCTCCGAGGAACCACATGAACACATGCCATTTCTACCGGGTCCAGTTGCTTCGTGCCTCTCT
TCTGCTCATGGCCATTAGCGCCACGGCGTCAGCCTCCGCCACCTCTTTCGAACTCGACGTGAAGGACCTGCAGACCGTTG
CCCCGGCCAAGCGCGCTCCCAAGCGCAAAGCCCCCGCTCCGGCCGCTTCTGCCGAAACCAAGCGCGATACCGTCCCTGCC
GAAACGAAGAGGGGTGTTTCCCGTTATACCGTTAAGCCGGGTGACTTCATCTTCAAGATACTGATGCGGGAATACGGCCT
TTCAAATGCGGCGGCTGAAGCGCTCATCCCTGAAATCCAGAGGATCAACAACCTGCGGAGCATCACTCGTCTTTCGGTTG
GACAGACCATCCTCATTCCCCTTGAGGGGCCACGGGCTGCTGTACGCGTTCAGGAGTTCGGTGAACGCCGGGAGACGGCC
GAACCCGCCGCAACCGTAGCAGTTGCCCCCCCTACGGAGCCATCGCCCCAGGTTGTTGAATCAGGCCCGGCTCCACCGTC
TGAGCAGACAGCCCCCCCTGTTACTGAAGCCGCCGCTCCCGTGCCCCCCCGGCCCGAGCCGGCACCGGCAACGCGCCCCG
CTGAAGCAGCACCACCGATCTCCCCGGCACCGGTCGTCGTTTCGGCGCCCTCCTCTTTCAGCCGGCGGCTCATCACCCTG
TGGCAGAGCCTCGTCCCCGGCCAGGAAAGGGTGGAACCCATCACACTCAACGGCAGGGTGCTCCCGCCCGAGGAATTCCC
CCTTCTTCTCGCCGCTGACGGTGGGAAGATACTGGTCGACATGAAAGGGACTCTGCTTCCCCGCGACAAAAGCACCTTGG
CTGAAAGACATCCCGATATCCGGCTGGTCTCGCGCGGAGCCAGCAGTGAACGGGATTTTTTCACCGTCCTGCTGCGCACC
GCGGAATTTGCCCACGTGGAAGAAGACGCCGTCGCCACAATAGGCTCCGATCCCCAGCTCACGGTCAAGGCCGACTACCG
AATTACCAGGCTGCCGGCAGTTGCCACGCGTGGACCGGAAAATGTATTTCTCTTTCTTGAGCGTAACGGGTCCTGCCTCC
CAGCAGCACTCATCTCGGCCCTTGCCGATAACGGGATCAACAGTGTGGAATTCTGCGATGTCGCTCCGCAGCCGCCGTCG
GTACCGGGCTACGAGTTGAGGAGCGTAACCGGCACGACCCCGTGCGAATTGGCTGTCCAATTGCTTGGTGTCCTGGCCGT
GAAGCTTGACCGCAACCGGATTGTATCGGGCTCCATGGGGGAGAATGCGGAGAGCCGGTTCAGCATCCGCGTGGATGGAT
ATTTTGAAAACGACGGGAAGAAGTTCATCCTGAGCTGTAACGACAATGACTCCTACAACTACACGCTCTTTCGCCTGCTG
CAGCTGGAAGGATACGGCATCATCCAACTGGGAGACAAAGACGACTTCGCCACCGTCGCGGACAAGATCCTCACGGTTCT
GCGCTATCCCCACTCCTTCGGCCGCCATGATTTCACCCATGACCGTTATACCGTATCGGCGCTGGGGTTCAGGGTGACGC
GGCTGGGGCCGGTTAGCGGCCGCATGCTGATCATCGATCGCCCCGTGGACCCGGCATTCGCAGAATTATTACAATGGGAA
CGCTAG

Upstream 100 bases:

>100_bases
TCCACGTGGAAAAGGGTACGACCACGGCCGGGGCCAGGATACTGATCTACCGGACAGCGCCCAAAGGCTCCATCAGGGCG
TTTGTAGTCTATTTCCCCTG

Downstream 100 bases:

>100_bases
CAGCATAGGGCAGAAAATGCAAAGAGGGGGGCGTCCGTCGGGACACCCCCCTCTTTGCATATGAACCGCCTGCCGTTCGG
CTGAGTGGTTAGAGCGTTAC

Product: LysM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 560

Protein sequence:

>561_residues
MALPSRSPRNHMNTCHFYRVQLLRASLLLMAISATASASATSFELDVKDLQTVAPAKRAPKRKAPAPAASAETKRDTVPA
ETKRGVSRYTVKPGDFIFKILMREYGLSNAAAEALIPEIQRINNLRSITRLSVGQTILIPLEGPRAAVRVQEFGERRETA
EPAATVAVAPPTEPSPQVVESGPAPPSEQTAPPVTEAAAPVPPRPEPAPATRPAEAAPPISPAPVVVSAPSSFSRRLITL
WQSLVPGQERVEPITLNGRVLPPEEFPLLLAADGGKILVDMKGTLLPRDKSTLAERHPDIRLVSRGASSERDFFTVLLRT
AEFAHVEEDAVATIGSDPQLTVKADYRITRLPAVATRGPENVFLFLERNGSCLPAALISALADNGINSVEFCDVAPQPPS
VPGYELRSVTGTTPCELAVQLLGVLAVKLDRNRIVSGSMGENAESRFSIRVDGYFENDGKKFILSCNDNDSYNYTLFRLL
QLEGYGIIQLGDKDDFATVADKILTVLRYPHSFGRHDFTHDRYTVSALGFRVTRLGPVSGRMLIIDRPVDPAFAELLQWE
R

Sequences:

>Translated_561_residues
MALPSRSPRNHMNTCHFYRVQLLRASLLLMAISATASASATSFELDVKDLQTVAPAKRAPKRKAPAPAASAETKRDTVPA
ETKRGVSRYTVKPGDFIFKILMREYGLSNAAAEALIPEIQRINNLRSITRLSVGQTILIPLEGPRAAVRVQEFGERRETA
EPAATVAVAPPTEPSPQVVESGPAPPSEQTAPPVTEAAAPVPPRPEPAPATRPAEAAPPISPAPVVVSAPSSFSRRLITL
WQSLVPGQERVEPITLNGRVLPPEEFPLLLAADGGKILVDMKGTLLPRDKSTLAERHPDIRLVSRGASSERDFFTVLLRT
AEFAHVEEDAVATIGSDPQLTVKADYRITRLPAVATRGPENVFLFLERNGSCLPAALISALADNGINSVEFCDVAPQPPS
VPGYELRSVTGTTPCELAVQLLGVLAVKLDRNRIVSGSMGENAESRFSIRVDGYFENDGKKFILSCNDNDSYNYTLFRLL
QLEGYGIIQLGDKDDFATVADKILTVLRYPHSFGRHDFTHDRYTVSALGFRVTRLGPVSGRMLIIDRPVDPAFAELLQWE
R
>Mature_560_residues
ALPSRSPRNHMNTCHFYRVQLLRASLLLMAISATASASATSFELDVKDLQTVAPAKRAPKRKAPAPAASAETKRDTVPAE
TKRGVSRYTVKPGDFIFKILMREYGLSNAAAEALIPEIQRINNLRSITRLSVGQTILIPLEGPRAAVRVQEFGERRETAE
PAATVAVAPPTEPSPQVVESGPAPPSEQTAPPVTEAAAPVPPRPEPAPATRPAEAAPPISPAPVVVSAPSSFSRRLITLW
QSLVPGQERVEPITLNGRVLPPEEFPLLLAADGGKILVDMKGTLLPRDKSTLAERHPDIRLVSRGASSERDFFTVLLRTA
EFAHVEEDAVATIGSDPQLTVKADYRITRLPAVATRGPENVFLFLERNGSCLPAALISALADNGINSVEFCDVAPQPPSV
PGYELRSVTGTTPCELAVQLLGVLAVKLDRNRIVSGSMGENAESRFSIRVDGYFENDGKKFILSCNDNDSYNYTLFRLLQ
LEGYGIIQLGDKDDFATVADKILTVLRYPHSFGRHDFTHDRYTVSALGFRVTRLGPVSGRMLIIDRPVDPAFAELLQWER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61026; Mature: 60895

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPSRSPRNHMNTCHFYRVQLLRASLLLMAISATASASATSFELDVKDLQTVAPAKRAP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCCHHHCC
KRKAPAPAASAETKRDTVPAETKRGVSRYTVKPGDFIFKILMREYGLSNAAAEALIPEIQ
CCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHH
RINNLRSITRLSVGQTILIPLEGPRAAVRVQEFGERRETAEPAATVAVAPPTEPSPQVVE
HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC
SGPAPPSEQTAPPVTEAAAPVPPRPEPAPATRPAEAAPPISPAPVVVSAPSSFSRRLITL
CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHH
WQSLVPGQERVEPITLNGRVLPPEEFPLLLAADGGKILVDMKGTLLPRDKSTLAERHPDI
HHHHCCCHHHCCEEEECCEECCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHCCCCE
RLVSRGASSERDFFTVLLRTAEFAHVEEDAVATIGSDPQLTVKADYRITRLPAVATRGPE
EEEECCCCCCHHHHHHHHHHHHHHHCCCCHHEECCCCCCEEEEECEEEEECCHHHCCCCC
NVFLFLERNGSCLPAALISALADNGINSVEFCDVAPQPPSVPGYELRSVTGTTPCELAVQ
EEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCCCCHHHHHHH
LLGVLAVKLDRNRIVSGSMGENAESRFSIRVDGYFENDGKKFILSCNDNDSYNYTLFRLL
HHHHHHEEECCCEEECCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCEEEEEEE
QLEGYGIIQLGDKDDFATVADKILTVLRYPHSFGRHDFTHDRYTVSALGFRVTRLGPVSG
EECCCEEEEECCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEECCEEEEEECCCCC
RMLIIDRPVDPAFAELLQWER
EEEEEECCCCHHHHHHHCCCC
>Mature Secondary Structure 
ALPSRSPRNHMNTCHFYRVQLLRASLLLMAISATASASATSFELDVKDLQTVAPAKRAP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCCHHHCC
KRKAPAPAASAETKRDTVPAETKRGVSRYTVKPGDFIFKILMREYGLSNAAAEALIPEIQ
CCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHH
RINNLRSITRLSVGQTILIPLEGPRAAVRVQEFGERRETAEPAATVAVAPPTEPSPQVVE
HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC
SGPAPPSEQTAPPVTEAAAPVPPRPEPAPATRPAEAAPPISPAPVVVSAPSSFSRRLITL
CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHH
WQSLVPGQERVEPITLNGRVLPPEEFPLLLAADGGKILVDMKGTLLPRDKSTLAERHPDI
HHHHCCCHHHCCEEEECCEECCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHCCCCE
RLVSRGASSERDFFTVLLRTAEFAHVEEDAVATIGSDPQLTVKADYRITRLPAVATRGPE
EEEECCCCCCHHHHHHHHHHHHHHHCCCCHHEECCCCCCEEEEECEEEEECCHHHCCCCC
NVFLFLERNGSCLPAALISALADNGINSVEFCDVAPQPPSVPGYELRSVTGTTPCELAVQ
EEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCCCCHHHHHHH
LLGVLAVKLDRNRIVSGSMGENAESRFSIRVDGYFENDGKKFILSCNDNDSYNYTLFRLL
HHHHHHEEECCCEEECCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCEEEEEEE
QLEGYGIIQLGDKDDFATVADKILTVLRYPHSFGRHDFTHDRYTVSALGFRVTRLGPVSG
EECCCEEEEECCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEECCEEEEEECCCCC
RMLIIDRPVDPAFAELLQWER
EEEEEECCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA