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The map label for this gene is 39998304

Identifier: 39998304

GI number: 39998304

Start: 3520152

End: 3520790

Strand: Reverse

Name: 39998304

Synonym: GSU3214

Alternate gene names: NA

Gene position: 3520790-3520152 (Counterclockwise)

Preceding gene: 39998319

Following gene: 39998303

Centisome position: 92.31

GC content: 62.75

Gene sequence:

>639_bases
ATGGTCTGGTCGAGCGGAACACTACGTCACCTGGTCAGTCTGATTTCAGCCTTCGCGCTGGTTGCTGCCGGTTCCATTGC
TGCCGAGGCTGCTATCAGCCGGGGCGTCTGCACCTTCTCGACCCAACTGGTCGACCCCGAGATGCGGGCCGGCTATATCG
GCATGGTTGCCACGGCTGCCGATGCCTCTTACTCCACCCGGACGGCAGCGGTTGACGCCGTTGAAGACGAGAGCGAGGGT
TTCGCCATTTTCGGAACTCTGCTCGACGCCGGCTACCATGAGCCGGTCGCCTCCCGTACCGATACCATCACCACTGCCTG
TCTCGGCTGCCACGATGGTGTCAGCGCGCCGCCGGTGGAGGCGGCACAGCGGATAACTCGCGTGTCGACCGGCGGGTTCA
CGGCCCAGAGCGTTCAGACCGCTTCCCCCATGAAAACCCATCCCATGGGGATGAATTATGCCCAGGTCGCCGCATCGGGA
CGCGGCTTCAGGGACCCGGCCCTGGTGGAACAGTCGCTCATGCTCTTTGACGGCACCGTAAGTTGCCTTACCTGCCACAA
CATGCTCAATCCTCGCCCCATGCATCTGGCGGTGGAGGATTACCGCAGCGCCCTCTGTCTCACCTGTCACGTCAAGTAG

Upstream 100 bases:

>100_bases
TAATGATTTCAAATTGTTAAAACAAAATTTGCAGTAATTAAAGAATCGGCACTCCCCTTGTAATGTGGTCCATTGCAGGC
ATTTCACGGAGGAGTCCCCC

Downstream 100 bases:

>100_bases
GTCAGATCGAACACGCCACGGGGACCGACTCCCCACTCCTTTCCATCGGCAGCCGACGCTGCCGATTTTTTTTGCCCGCC
ACCTGACGAATTCTGCTATA

Product: cytochrome C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MVWSSGTLRHLVSLISAFALVAAGSIAAEAAISRGVCTFSTQLVDPEMRAGYIGMVATAADASYSTRTAAVDAVEDESEG
FAIFGTLLDAGYHEPVASRTDTITTACLGCHDGVSAPPVEAAQRITRVSTGGFTAQSVQTASPMKTHPMGMNYAQVAASG
RGFRDPALVEQSLMLFDGTVSCLTCHNMLNPRPMHLAVEDYRSALCLTCHVK

Sequences:

>Translated_212_residues
MVWSSGTLRHLVSLISAFALVAAGSIAAEAAISRGVCTFSTQLVDPEMRAGYIGMVATAADASYSTRTAAVDAVEDESEG
FAIFGTLLDAGYHEPVASRTDTITTACLGCHDGVSAPPVEAAQRITRVSTGGFTAQSVQTASPMKTHPMGMNYAQVAASG
RGFRDPALVEQSLMLFDGTVSCLTCHNMLNPRPMHLAVEDYRSALCLTCHVK
>Mature_212_residues
MVWSSGTLRHLVSLISAFALVAAGSIAAEAAISRGVCTFSTQLVDPEMRAGYIGMVATAADASYSTRTAAVDAVEDESEG
FAIFGTLLDAGYHEPVASRTDTITTACLGCHDGVSAPPVEAAQRITRVSTGGFTAQSVQTASPMKTHPMGMNYAQVAASG
RGFRDPALVEQSLMLFDGTVSCLTCHNMLNPRPMHLAVEDYRSALCLTCHVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22265; Mature: 22265

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWSSGTLRHLVSLISAFALVAAGSIAAEAAISRGVCTFSTQLVDPEMRAGYIGMVATAA
CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEHHHCCHHHHCCEEEEEEEEC
DASYSTRTAAVDAVEDESEGFAIFGTLLDAGYHEPVASRTDTITTACLGCHDGVSAPPVE
CCCCCCHHHHHCCCCCCCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHH
AAQRITRVSTGGFTAQSVQTASPMKTHPMGMNYAQVAASGRGFRDPALVEQSLMLFDGTV
HHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCH
SCLTCHNMLNPRPMHLAVEDYRSALCLTCHVK
HHHHHHHCCCCCCEEEEHHHHCCEEEEEEECC
>Mature Secondary Structure
MVWSSGTLRHLVSLISAFALVAAGSIAAEAAISRGVCTFSTQLVDPEMRAGYIGMVATAA
CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEHHHCCHHHHCCEEEEEEEEC
DASYSTRTAAVDAVEDESEGFAIFGTLLDAGYHEPVASRTDTITTACLGCHDGVSAPPVE
CCCCCCHHHHHCCCCCCCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHH
AAQRITRVSTGGFTAQSVQTASPMKTHPMGMNYAQVAASGRGFRDPALVEQSLMLFDGTV
HHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCH
SCLTCHNMLNPRPMHLAVEDYRSALCLTCHVK
HHHHHHHCCCCCCEEEEHHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA