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The map label for this gene is ybeB [H]

Identifier: 39998299

GI number: 39998299

Start: 3515275

End: 3515670

Strand: Reverse

Name: ybeB [H]

Synonym: GSU3209

Alternate gene names: 39998299

Gene position: 3515670-3515275 (Counterclockwise)

Preceding gene: 39998300

Following gene: 39998298

Centisome position: 92.17

GC content: 61.87

Gene sequence:

>396_bases
ATGACGGATAAACTCACGCTCACTCCCCTCGAGCGCGCGCTCCAGTGCGCCCGCTTCGCCCTCGACAAGAAGGCCCTTGA
TGTGAAGGTCCTCGAGATCGGCCGGATATCGTCCATTGCCGACTATCTGGTGCTTGCCACGGGCCGTTCGGACAAGCAGG
CCCAGGCCATTGCCGATTCGGTCAAGAAGGGGCTCAAGAAGTACGGCAAGGTCATCGATATGGAGGGGCTGCGGGAAGGG
AACTGGATCGTGATCGACTACGGTGACGTGATCGTCCACATCTTCCGGGAGGAACTGCGCTCCTACTACGACCTGGACGG
CCTCTGGTCCGCTGCCGGGCAGGTGGCGATTCCCGCGGAGTACCTGTGGGAAGGGAAGGAAGGGGGAGGGGAGTGA

Upstream 100 bases:

>100_bases
TCCCGTTCCATCCGCGGACTCGCTCGCCTCGGCAGGTCGATCAGGTACTTGGTCCCGGAGGCGGTGGAGCGCTACATCAA
CGAACAAAGGATCTATGCCC

Downstream 100 bases:

>100_bases
TCCTCGCCCTCTCCGTGCCGGCCGGGGTCGGAGCGCCGTGAAACTGCGCGTGCTCTGGGTCGGCAAGACCCAGGAGGAGT
GGGTTCGGCGCGGCATTGAC

Product: iojap-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTDKLTLTPLERALQCARFALDKKALDVKVLEIGRISSIADYLVLATGRSDKQAQAIADSVKKGLKKYGKVIDMEGLREG
NWIVIDYGDVIVHIFREELRSYYDLDGLWSAAGQVAIPAEYLWEGKEGGGE

Sequences:

>Translated_131_residues
MTDKLTLTPLERALQCARFALDKKALDVKVLEIGRISSIADYLVLATGRSDKQAQAIADSVKKGLKKYGKVIDMEGLREG
NWIVIDYGDVIVHIFREELRSYYDLDGLWSAAGQVAIPAEYLWEGKEGGGE
>Mature_130_residues
TDKLTLTPLERALQCARFALDKKALDVKVLEIGRISSIADYLVLATGRSDKQAQAIADSVKKGLKKYGKVIDMEGLREGN
WIVIDYGDVIVHIFREELRSYYDLDGLWSAAGQVAIPAEYLWEGKEGGGE

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=104, Percent_Identity=39.4230769230769, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 14548; Mature: 14417

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKLTLTPLERALQCARFALDKKALDVKVLEIGRISSIADYLVLATGRSDKQAQAIADS
CCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHH
VKKGLKKYGKVIDMEGLREGNWIVIDYGDVIVHIFREELRSYYDLDGLWSAAGQVAIPAE
HHHHHHHHCCEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHCCCCEECCHH
YLWEGKEGGGE
HHCCCCCCCCC
>Mature Secondary Structure 
TDKLTLTPLERALQCARFALDKKALDVKVLEIGRISSIADYLVLATGRSDKQAQAIADS
CCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHH
VKKGLKKYGKVIDMEGLREGNWIVIDYGDVIVHIFREELRSYYDLDGLWSAAGQVAIPAE
HHHHHHHHCCEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHCCCCEECCHH
YLWEGKEGGGE
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]