Click here to switch to the map view.

The map label for this gene is dksA [H]

Identifier: 39998296

GI number: 39998296

Start: 3512703

End: 3513122

Strand: Direct

Name: dksA [H]

Synonym: GSU3206

Alternate gene names: 39998296

Gene position: 3512703-3513122 (Clockwise)

Preceding gene: 39998295

Following gene: 39998305

Centisome position: 92.1

GC content: 58.33

Gene sequence:

>420_bases
ATGATTGAAAAATCTGAGGAAATGAAGGCTCTTCTCGTCAAACTCAAGGATGAGACCCTTCAGGAGATACACAAGGCGAT
GCGTAGCGGCTCCGAGAATGCAGGGGGCGAGCCCACGGGCGACATCTACGACCAGGCGTCCAGCGAGCGCGACCGGGAGC
TGGGACTGCTTCTGAGTGACCGGGAGCGGGACAAGCTGCGCAAAATCGATGAGGCCCTCTTGAAGATCGAGGACGGAGAA
TACGGCATCTGCGAGGAGTGCGAGGAAGAAATCCCCCTGGGACGCCTCAAGGTCATGCCTTTTGCACGCTACTGCGTCAA
GTGCCAGTCGGACATCGAAAAGATCCAGGCCCAGACCCGCCGTTTCGAGGAAGAGCGGGCGTATCGCGAGATCGCCTTCG
GCGAAGAAGAAGAGGCCTGA

Upstream 100 bases:

>100_bases
CTGATCGGCATTCAGGCCCGCTTTTTGCTTGACTTCAAAAAAGTTTTCGGTATCATTTCGTGGCTCTTGAGGCCGGAAAA
TCAGCAGAGGGAGATAGTAA

Downstream 100 bases:

>100_bases
CAGCCTCTCGAGCGGACCGAGAGAAAAAGGGCGCTGCCGACAGCGCCCTTTTTTGTCGCCTCTGACCTGGGAGTCAAAAT
ACCGCCACAACCATCACTCG

Product: dnaK suppressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MIEKSEEMKALLVKLKDETLQEIHKAMRSGSENAGGEPTGDIYDQASSERDRELGLLLSDRERDKLRKIDEALLKIEDGE
YGICEECEEEIPLGRLKVMPFARYCVKCQSDIEKIQAQTRRFEEERAYREIAFGEEEEA

Sequences:

>Translated_139_residues
MIEKSEEMKALLVKLKDETLQEIHKAMRSGSENAGGEPTGDIYDQASSERDRELGLLLSDRERDKLRKIDEALLKIEDGE
YGICEECEEEIPLGRLKVMPFARYCVKCQSDIEKIQAQTRRFEEERAYREIAFGEEEEA
>Mature_139_residues
MIEKSEEMKALLVKLKDETLQEIHKAMRSGSENAGGEPTGDIYDQASSERDRELGLLLSDRERDKLRKIDEALLKIEDGE
YGICEECEEEIPLGRLKVMPFARYCVKCQSDIEKIQAQTRRFEEERAYREIAFGEEEEA

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 16076; Mature: 16076

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKSEEMKALLVKLKDETLQEIHKAMRSGSENAGGEPTGDIYDQASSERDRELGLLLSD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHCHHHCC
RERDKLRKIDEALLKIEDGEYGICEECEEEIPLGRLKVMPFARYCVKCQSDIEKIQAQTR
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RFEEERAYREIAFGEEEEA
HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIEKSEEMKALLVKLKDETLQEIHKAMRSGSENAGGEPTGDIYDQASSERDRELGLLLSD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHCHHHCC
RERDKLRKIDEALLKIEDGEYGICEECEEEIPLGRLKVMPFARYCVKCQSDIEKIQAQTR
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RFEEERAYREIAFGEEEEA
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]