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The map label for this gene is 39998282

Identifier: 39998282

GI number: 39998282

Start: 3499180

End: 3499629

Strand: Direct

Name: 39998282

Synonym: GSU3192

Alternate gene names: NA

Gene position: 3499180-3499629 (Clockwise)

Preceding gene: 39998280

Following gene: 39998283

Centisome position: 91.74

GC content: 61.56

Gene sequence:

>450_bases
ATGGCCGCATCTCCCAAGGATCCGCTCGACTGGGCAGCACTGCTGCAGCTCCAGATGGACGAGGCGTTCGACTTCATTCT
TCGCTCGGAAGCCGGCAGCGTCGCCGAATGTGATCTTTCGCCGCCCGTCGATATTTTCGAGACGCCGGATGCCTTTTCCG
TGGAGTTCGACCTTCCCGGCACCGATCCCGCCGACTTGTCGCTGAAGCTTTGCTGCAACATGCTGATCCTTGAAGGGGTG
AAGCGGGACGATTCCCGCGAAGGGGGCAGCTACCTCTGCCTCGAGCGCCGCTTCGGGCGCTTCTGCCGAACCGTCGAAAT
CCCGCCGACGGTTGATGTAAGCGCCGTCCGTGCCGACTATCGCCGCGGCGTACTGACAGTGACCTTTCCCCGCCTCAGCG
ACCGGCGGAAGGTCATGCGGGATATACCGATCATACAAGGAGACAACTGA

Upstream 100 bases:

>100_bases
CTTGACTTCACGGCTAAAGATGATTAAATCTTCAAAAGCCGGAAGGGTGGGCACGAAGATGTGCGCCCTCTTCCGGCCTT
TCTGAACTCGCGGGGTGAAC

Downstream 100 bases:

>100_bases
TGGATGACCATAAACAGGAAAACGAGGAGCTAAAAATACCGGACGTGCTGCCCCTGTTGCCGGTTCGGGACGTTGTGGTC
TATCCGTACATGATTCTTCC

Product: HSP20 family protein

Products: NA

Alternate protein names: HSP20 Family Protein; Heat Shock Protein; HspC2 Heat Shock Protein; Heat Shock Protein Class I; Molecular Chaperone; Small Heat Shock Protein; Heat Shock Protein Family Protein; Alpha-Crystallin/Hsp20 Family ATP-Independent Chaperone; 6.6 KDa Small Heat Shock Protein

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAASPKDPLDWAALLQLQMDEAFDFILRSEAGSVAECDLSPPVDIFETPDAFSVEFDLPGTDPADLSLKLCCNMLILEGV
KRDDSREGGSYLCLERRFGRFCRTVEIPPTVDVSAVRADYRRGVLTVTFPRLSDRRKVMRDIPIIQGDN

Sequences:

>Translated_149_residues
MAASPKDPLDWAALLQLQMDEAFDFILRSEAGSVAECDLSPPVDIFETPDAFSVEFDLPGTDPADLSLKLCCNMLILEGV
KRDDSREGGSYLCLERRFGRFCRTVEIPPTVDVSAVRADYRRGVLTVTFPRLSDRRKVMRDIPIIQGDN
>Mature_148_residues
AASPKDPLDWAALLQLQMDEAFDFILRSEAGSVAECDLSPPVDIFETPDAFSVEFDLPGTDPADLSLKLCCNMLILEGVK
RDDSREGGSYLCLERRFGRFCRTVEIPPTVDVSAVRADYRRGVLTVTFPRLSDRRKVMRDIPIIQGDN

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16656; Mature: 16525

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASPKDPLDWAALLQLQMDEAFDFILRSEAGSVAECDLSPPVDIFETPDAFSVEFDLPG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEECCCCEEEEEECCC
TDPADLSLKLCCNMLILEGVKRDDSREGGSYLCLERRFGRFCRTVEIPPTVDVSAVRADY
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHEECCCCCCCCHHHHHHHH
RRGVLTVTFPRLSDRRKVMRDIPIIQGDN
HCCEEEEECCCCCHHHHHHHHCCCEECCC
>Mature Secondary Structure 
AASPKDPLDWAALLQLQMDEAFDFILRSEAGSVAECDLSPPVDIFETPDAFSVEFDLPG
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEECCCCEEEEEECCC
TDPADLSLKLCCNMLILEGVKRDDSREGGSYLCLERRFGRFCRTVEIPPTVDVSAVRADY
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHEECCCCCCCCHHHHHHHH
RRGVLTVTFPRLSDRRKVMRDIPIIQGDN
HCCEEEEECCCCCHHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA