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The map label for this gene is 39998255

Identifier: 39998255

GI number: 39998255

Start: 3469894

End: 3470688

Strand: Direct

Name: 39998255

Synonym: GSU3165

Alternate gene names: NA

Gene position: 3469894-3470688 (Clockwise)

Preceding gene: 39998254

Following gene: 39998256

Centisome position: 90.97

GC content: 62.26

Gene sequence:

>795_bases
GTGCTTAACGGTACCGCCGTGCGTCCATGCCCCGTCATGCCCATCGATGCCGGGTTCGATCCTGCCTTCGGCCGTCGCAC
AGCAGCGGCCGGCAGAGAGGTTTATCCATCCATGCATCTGACCGACTGCTTCACAGACGTTATGGCCTACCTGAACCACT
CCCTCCGGACCATCGGGGTCCGACAGCCCCCCTACGGAGAAATTCGCTGTGAAATCGAACGGTTCATGGCGACGGCGGAT
GCCGCAGCCCGCAGCGAAGGGCTCGACGGGGAGGAATTCGACCTGGCGCGCTTCGCCGTCTGCGCCTGGATCGACGAAGC
GATTCTCTCCTCATCATGGGAAGAAAAAAACACCTGGCTGAAGGAACAACTCCAGCGCATCCACTACGCCACCACCGACG
CGGGGGAGGAATTCTTCACCAGGCTCACGGCGCTCGGGCTCAATCAGCGGGAGGTGCGGGAAGTGTTCTATCTCTGCCTG
GCCTTCGGCTTTACCGGCAAATACTGCAAGCCTGGCGACGAGTACCACCTGGAACAGTTGAAAACCGCCCAGCTGAAACT
GCTGATGGGAAGTTCGGTAGGACTTCCCTCTCTGGAACGGACCGAACTCTTTCCCGAGGCATGGCCGTCGGGGCCGGCAC
CGGCAACCGTCCGCCCCGGACGCGGGCAGGGAAGCCGGGCGTTCCTGGTTGCCGTGGCAGCTGTGCCGGTGGCCTTGTTC
CTGATTCTGCTCCTGGCCTACCGCTTCACGCTCACGGGCGTGGGTGACACGTTCCTGAGGACGGTACCATACTGA

Upstream 100 bases:

>100_bases
TCATTCCCATCCGCTAGGACGGCGGCCCGCGCGATTCACCCGGAATCAGACCTTTCCTGGCATTTCCCATCACAGCGAAC
GGTGACTCACGGTAGCCGGA

Downstream 100 bases:

>100_bases
AATGAGCGAACGGATGATGAAATCGCTGAAATGGCTGCTGCTGGCGAGTGTCGTCGTGCTCACGGTATTCCTGGTGGCCG
GGATCGTCCTGGCGCTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Type IV / VI Secretion System Protein DotU Family; Type VI Secretion System Protein; Type VI Secretion System Protein EvpN

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLNGTAVRPCPVMPIDAGFDPAFGRRTAAAGREVYPSMHLTDCFTDVMAYLNHSLRTIGVRQPPYGEIRCEIERFMATAD
AAARSEGLDGEEFDLARFAVCAWIDEAILSSSWEEKNTWLKEQLQRIHYATTDAGEEFFTRLTALGLNQREVREVFYLCL
AFGFTGKYCKPGDEYHLEQLKTAQLKLLMGSSVGLPSLERTELFPEAWPSGPAPATVRPGRGQGSRAFLVAVAAVPVALF
LILLLAYRFTLTGVGDTFLRTVPY

Sequences:

>Translated_264_residues
MLNGTAVRPCPVMPIDAGFDPAFGRRTAAAGREVYPSMHLTDCFTDVMAYLNHSLRTIGVRQPPYGEIRCEIERFMATAD
AAARSEGLDGEEFDLARFAVCAWIDEAILSSSWEEKNTWLKEQLQRIHYATTDAGEEFFTRLTALGLNQREVREVFYLCL
AFGFTGKYCKPGDEYHLEQLKTAQLKLLMGSSVGLPSLERTELFPEAWPSGPAPATVRPGRGQGSRAFLVAVAAVPVALF
LILLLAYRFTLTGVGDTFLRTVPY
>Mature_264_residues
MLNGTAVRPCPVMPIDAGFDPAFGRRTAAAGREVYPSMHLTDCFTDVMAYLNHSLRTIGVRQPPYGEIRCEIERFMATAD
AAARSEGLDGEEFDLARFAVCAWIDEAILSSSWEEKNTWLKEQLQRIHYATTDAGEEFFTRLTALGLNQREVREVFYLCL
AFGFTGKYCKPGDEYHLEQLKTAQLKLLMGSSVGLPSLERTELFPEAWPSGPAPATVRPGRGQGSRAFLVAVAAVPVALF
LILLLAYRFTLTGVGDTFLRTVPY

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29285; Mature: 29285

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNGTAVRPCPVMPIDAGFDPAFGRRTAAAGREVYPSMHLTDCFTDVMAYLNHSLRTIGV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHEECC
RQPPYGEIRCEIERFMATADAAARSEGLDGEEFDLARFAVCAWIDEAILSSSWEEKNTWL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KEQLQRIHYATTDAGEEFFTRLTALGLNQREVREVFYLCLAFGFTGKYCKPGDEYHLEQL
HHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KTAQLKLLMGSSVGLPSLERTELFPEAWPSGPAPATVRPGRGQGSRAFLVAVAAVPVALF
HHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LILLLAYRFTLTGVGDTFLRTVPY
HHHHHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MLNGTAVRPCPVMPIDAGFDPAFGRRTAAAGREVYPSMHLTDCFTDVMAYLNHSLRTIGV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHEECC
RQPPYGEIRCEIERFMATADAAARSEGLDGEEFDLARFAVCAWIDEAILSSSWEEKNTWL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KEQLQRIHYATTDAGEEFFTRLTALGLNQREVREVFYLCLAFGFTGKYCKPGDEYHLEQL
HHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KTAQLKLLMGSSVGLPSLERTELFPEAWPSGPAPATVRPGRGQGSRAFLVAVAAVPVALF
HHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LILLLAYRFTLTGVGDTFLRTVPY
HHHHHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA