Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39998254

Identifier: 39998254

GI number: 39998254

Start: 3469452

End: 3469658

Strand: Direct

Name: 39998254

Synonym: GSU3164

Alternate gene names: NA

Gene position: 3469452-3469658 (Clockwise)

Preceding gene: 39998253

Following gene: 39998255

Centisome position: 90.96

GC content: 64.25

Gene sequence:

>207_bases
GTGGAAAGGTTTTTCACCGAAAAGGGCATCCCCTACACCTGCCGCGACATCCGCCGCGACCGCGCCGCGTTCCGGGAGTG
GCGCGAGCGCTACGGCGGCGAGATCGTACCCATGGTAGTCCTCGATGGAGGAAAGAAGGTTATCGACGGCTGCGACATTC
CTGCCATCGAACGCGCCCTGGCGGACATTCGCTCCTCCCGGCCGTGA

Upstream 100 bases:

>100_bases
ACTGCTCCATTCCGCCCCGGACAAGCCCGGCCGGACAGCCGAATCCCGTAACCCCTCAGTGGTCATCTTCGTCGGTGAAG
GCTGACCCTACTGCGATGAG

Downstream 100 bases:

>100_bases
GCACCCCGTGCGCCTCGCACACATCGCAGCAACCCAACCCCTTGTTATTCGACGAAAACCCCCACAGCTTTTTATTGACT
TTTAATGTGAGCTCTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MERFFTEKGIPYTCRDIRRDRAAFREWRERYGGEIVPMVVLDGGKKVIDGCDIPAIERALADIRSSRP

Sequences:

>Translated_68_residues
MERFFTEKGIPYTCRDIRRDRAAFREWRERYGGEIVPMVVLDGGKKVIDGCDIPAIERALADIRSSRP
>Mature_68_residues
MERFFTEKGIPYTCRDIRRDRAAFREWRERYGGEIVPMVVLDGGKKVIDGCDIPAIERALADIRSSRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7886; Mature: 7886

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFFTEKGIPYTCRDIRRDRAAFREWRERYGGEIVPMVVLDGGKKVIDGCDIPAIERAL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCHHHHHHH
ADIRSSRP
HHHHCCCC
>Mature Secondary Structure
MERFFTEKGIPYTCRDIRRDRAAFREWRERYGGEIVPMVVLDGGKKVIDGCDIPAIERAL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCHHHHHHH
ADIRSSRP
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA