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The map label for this gene is dcrA [H]

Identifier: 39998246

GI number: 39998246

Start: 3463071

End: 3464168

Strand: Direct

Name: dcrA [H]

Synonym: GSU3156

Alternate gene names: 39998246

Gene position: 3463071-3464168 (Clockwise)

Preceding gene: 39998234

Following gene: 39998247

Centisome position: 90.8

GC content: 59.47

Gene sequence:

>1098_bases
ATGAAGAAGCAGTTGGAGGAAAAAGACGCCGAGCTTGATGTGCTCAAGCAAATGCTTGAAAATGTGAAAAACATTGTGAT
GCTCTGCGATGCAACCCCTGAAAATACTATCTTCTACATGAACAAGGCGGCGAGGGAGCTGCTGGCAAAATACCGTGGCG
ACCTGAACGCCGGCCTGCGCGGGGCCGACGTGGCAGCAGCCATGGACCATTCCATTCACCAGTTCCACAAGGATCCGAAC
CGCGTACGCATGATCCTGGGCAAACCGGGCGAAATGCCCCATTCGGCCGAAATCCCCATCGGGGGAATAACGCTCCGCAC
CACATCCTTCCCCATCTGGGACAAGAAGAATCCCGGCAGGGTCAAATGCTACATGGCATGCTGGGATGACATCACCGCCG
AAAAGGAAGTGGTGGAGCGCAACCATCAGGAGCTGCAGCGCAAGGAATATCTGGAGGAGCGGGTGGCCCAGATCGCCACG
GCCATGGAAGAGATGAGCATGACCGTGACCGAGGTGGCCCGCAACACCTCGAACGCTTCCGATTCGGCGGTCCAGGTTGC
CCAGAACGCCCACGAGGGTCAGGAAATCGTCAACCGGTCGGTCCAGGAGATGCAGAAGGTTGCCCAGATCGTCCGCGATT
CGGCTGCCATCGTCGACTCGCTGGGGGGCAAATCGGAGAAGATTGGCGAGATCATCAACGTCATCAATGAAATCGCTGAC
CAGACAAACCTCCTGGCTCTCAACGCCGCCATCGAGGCGGCCCGCGCCGGCGAACAGGGGCGCGGCTTCGCCGTGGTGGC
CGATGAGGTCCGCAACCTGGCGGTCAAGACCATGAACTCCACCAAGCAGATCAACGCCATGGTGGCCGAAATCCAGCGGG
AAACCCGCCAGGCCGTGGGTTCCATCGAGAACGCCAAGCAGGAGGCCGAAGTGAGCGAAAGCCTCTCGCTCCAGGCGGAA
TCGTCGCTGGTGACCATCGTTCAGGCCATCGAGGAGATCAAGAACGTCATCACCCAGATCGCCACCGCCTCAGAGGAGCA
GGCAGCCACCGCCTCGGTGATTGCCGGCAATCTGGAGGAAATCTCGCGCAACGGCTGA

Upstream 100 bases:

>100_bases
AATCTGCTTTGGTTGCCGATGTAGATTAGTAGTGGTTCAGTGCCAAACCGTATGAAGGTTTCCGTCCAAAGGAGGTACTA
CCGTGTTTTTTGTATCGGGG

Downstream 100 bases:

>100_bases
CCCCACGCCTGACTCGCATATCAGAGTGTTACGAAACTGCCTGCAATAGCCCGCTTCTGCGGGCTTTTTTTTGCCCAGCC
ATCGAGGTTGTTGCCCCGCG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MKKQLEEKDAELDVLKQMLENVKNIVMLCDATPENTIFYMNKAARELLAKYRGDLNAGLRGADVAAAMDHSIHQFHKDPN
RVRMILGKPGEMPHSAEIPIGGITLRTTSFPIWDKKNPGRVKCYMACWDDITAEKEVVERNHQELQRKEYLEERVAQIAT
AMEEMSMTVTEVARNTSNASDSAVQVAQNAHEGQEIVNRSVQEMQKVAQIVRDSAAIVDSLGGKSEKIGEIINVINEIAD
QTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTMNSTKQINAMVAEIQRETRQAVGSIENAKQEAEVSESLSLQAE
SSLVTIVQAIEEIKNVITQIATASEEQAATASVIAGNLEEISRNG

Sequences:

>Translated_365_residues
MKKQLEEKDAELDVLKQMLENVKNIVMLCDATPENTIFYMNKAARELLAKYRGDLNAGLRGADVAAAMDHSIHQFHKDPN
RVRMILGKPGEMPHSAEIPIGGITLRTTSFPIWDKKNPGRVKCYMACWDDITAEKEVVERNHQELQRKEYLEERVAQIAT
AMEEMSMTVTEVARNTSNASDSAVQVAQNAHEGQEIVNRSVQEMQKVAQIVRDSAAIVDSLGGKSEKIGEIINVINEIAD
QTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTMNSTKQINAMVAEIQRETRQAVGSIENAKQEAEVSESLSLQAE
SSLVTIVQAIEEIKNVITQIATASEEQAATASVIAGNLEEISRNG
>Mature_365_residues
MKKQLEEKDAELDVLKQMLENVKNIVMLCDATPENTIFYMNKAARELLAKYRGDLNAGLRGADVAAAMDHSIHQFHKDPN
RVRMILGKPGEMPHSAEIPIGGITLRTTSFPIWDKKNPGRVKCYMACWDDITAEKEVVERNHQELQRKEYLEERVAQIAT
AMEEMSMTVTEVARNTSNASDSAVQVAQNAHEGQEIVNRSVQEMQKVAQIVRDSAAIVDSLGGKSEKIGEIINVINEIAD
QTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTMNSTKQINAMVAEIQRETRQAVGSIENAKQEAEVSESLSLQAE
SSLVTIVQAIEEIKNVITQIATASEEQAATASVIAGNLEEISRNG

Specific function: Mediates Taxis Toward Dipeptides VIa An Interaction With The Periplasmic Dipeptide-Binding Protein. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Transduce A Signal From The Outsid

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=212, Percent_Identity=37.7358490566038, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI2367378, Length=213, Percent_Identity=35.2112676056338, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1788195, Length=229, Percent_Identity=35.3711790393013, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1787690, Length=194, Percent_Identity=40.2061855670103, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1789453, Length=202, Percent_Identity=33.6633663366337, Blast_Score=93, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 40036; Mature: 40036

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQLEEKDAELDVLKQMLENVKNIVMLCDATPENTIFYMNKAARELLAKYRGDLNAGLR
CCCCCHHHCCHHHHHHHHHHHHHHHEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCCCC
GADVAAAMDHSIHQFHKDPNRVRMILGKPGEMPHSAEIPIGGITLRTTSFPIWDKKNPGR
CHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
VKCYMACWDDITAEKEVVERNHQELQRKEYLEERVAQIATAMEEMSMTVTEVARNTSNAS
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DSAVQVAQNAHEGQEIVNRSVQEMQKVAQIVRDSAAIVDSLGGKSEKIGEIINVINEIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTMNSTKQINAMVAEIQRETRQAVG
HHCEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIENAKQEAEVSESLSLQAESSLVTIVQAIEEIKNVITQIATASEEQAATASVIAGNLEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH
ISRNG
HCCCC
>Mature Secondary Structure
MKKQLEEKDAELDVLKQMLENVKNIVMLCDATPENTIFYMNKAARELLAKYRGDLNAGLR
CCCCCHHHCCHHHHHHHHHHHHHHHEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCCCC
GADVAAAMDHSIHQFHKDPNRVRMILGKPGEMPHSAEIPIGGITLRTTSFPIWDKKNPGR
CHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
VKCYMACWDDITAEKEVVERNHQELQRKEYLEERVAQIATAMEEMSMTVTEVARNTSNAS
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DSAVQVAQNAHEGQEIVNRSVQEMQKVAQIVRDSAAIVDSLGGKSEKIGEIINVINEIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTMNSTKQINAMVAEIQRETRQAVG
HHCEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIENAKQEAEVSESLSLQAESSLVTIVQAIEEIKNVITQIATASEEQAATASVIAGNLEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH
ISRNG
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]