| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39998241
Identifier: 39998241
GI number: 39998241
Start: 3458395
End: 3459048
Strand: Reverse
Name: 39998241
Synonym: GSU3151
Alternate gene names: NA
Gene position: 3459048-3458395 (Counterclockwise)
Preceding gene: 39998242
Following gene: 39998240
Centisome position: 90.69
GC content: 66.67
Gene sequence:
>654_bases ATGAACAGGAAGACCATTGTTATCCCCGCCCTTTATCTAACCCTTCTCTCCGCCGGGGTCACCCTGTCCGCCGGCAGCGC CCGGGCCCACTGCGACACCATGGACGGCCCGGTCATCCAGGATGCCCGTATCGCCCTGAAGAAGAACGACGTCACCCCGG TCCTCAAATGGGTCCGGGAGAAGGATGAGCCCACGGTCCGCGCTTCCTTCAAAGAAGCCGTAGCCGCAGCGCAGAAGGGG ACGAAGGCGAAGGAGGCGGCCGAGCACCGCTTTTTCACCTCGCTGGTGAAGGTCCACCGGACCGCAGAAGGGGCTCCCTT TACCGGGCTCAAACCCGCCGGCACGGTGGAGCCCCCGGTGGCGGCGGCCGATGAGGCCCTGGCGTCGGGGTCATCGACCG AACTCGTGAAGATCGTCACCGATGCGGTTGCCGCCGGTATCCGCGAGCGCTTCGACCGGGTTGTCGAGGCGAAGAAGCAC AAGGACGAGAGCGTGGCGGCCGGCCGGAAGTACGTGGCAGCCTACGTGGAGTACACTCACTACGTGGAGCGCCTCCACCA GGCCGCGGAAGGACACGCCGCCCACCATGGCGGTCCGACCGGGACGAAGGCGCCTCACGGCCACGGCGATGCCCATGTGA GCCACGGCCACTGA
Upstream 100 bases:
>100_bases AGGCCCTTTGCTGGGGGCTCGTTGCGGCGGCCGCCCTGCTCTGGAAAAGAGAGTGAGGCAGTCTCCACCCATCACAACGA CGTGAAGGAGAACCGGAACC
Downstream 100 bases:
>100_bases TCGCGCCGTTCATTGATCCAGGCATGGAGGCCGTGCGCGCTTGAAAAAACGGATCACCCGGTTACCCGGCAAGATGAAAG GGCAGGGGAGGAACAGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MNRKTIVIPALYLTLLSAGVTLSAGSARAHCDTMDGPVIQDARIALKKNDVTPVLKWVREKDEPTVRASFKEAVAAAQKG TKAKEAAEHRFFTSLVKVHRTAEGAPFTGLKPAGTVEPPVAAADEALASGSSTELVKIVTDAVAAGIRERFDRVVEAKKH KDESVAAGRKYVAAYVEYTHYVERLHQAAEGHAAHHGGPTGTKAPHGHGDAHVSHGH
Sequences:
>Translated_217_residues MNRKTIVIPALYLTLLSAGVTLSAGSARAHCDTMDGPVIQDARIALKKNDVTPVLKWVREKDEPTVRASFKEAVAAAQKG TKAKEAAEHRFFTSLVKVHRTAEGAPFTGLKPAGTVEPPVAAADEALASGSSTELVKIVTDAVAAGIRERFDRVVEAKKH KDESVAAGRKYVAAYVEYTHYVERLHQAAEGHAAHHGGPTGTKAPHGHGDAHVSHGH >Mature_217_residues MNRKTIVIPALYLTLLSAGVTLSAGSARAHCDTMDGPVIQDARIALKKNDVTPVLKWVREKDEPTVRASFKEAVAAAQKG TKAKEAAEHRFFTSLVKVHRTAEGAPFTGLKPAGTVEPPVAAADEALASGSSTELVKIVTDAVAAGIRERFDRVVEAKKH KDESVAAGRKYVAAYVEYTHYVERLHQAAEGHAAHHGGPTGTKAPHGHGDAHVSHGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23072; Mature: 23072
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKTIVIPALYLTLLSAGVTLSAGSARAHCDTMDGPVIQDARIALKKNDVTPVLKWVRE CCCCEEEHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHC KDEPTVRASFKEAVAAAQKGTKAKEAAEHRFFTSLVKVHRTAEGAPFTGLKPAGTVEPPV CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH AAADEALASGSSTELVKIVTDAVAAGIRERFDRVVEAKKHKDESVAAGRKYVAAYVEYTH HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YVERLHQAAEGHAAHHGGPTGTKAPHGHGDAHVSHGH HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRKTIVIPALYLTLLSAGVTLSAGSARAHCDTMDGPVIQDARIALKKNDVTPVLKWVRE CCCCEEEHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHC KDEPTVRASFKEAVAAAQKGTKAKEAAEHRFFTSLVKVHRTAEGAPFTGLKPAGTVEPPV CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH AAADEALASGSSTELVKIVTDAVAAGIRERFDRVVEAKKHKDESVAAGRKYVAAYVEYTH HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YVERLHQAAEGHAAHHGGPTGTKAPHGHGDAHVSHGH HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA