Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39998241

Identifier: 39998241

GI number: 39998241

Start: 3458395

End: 3459048

Strand: Reverse

Name: 39998241

Synonym: GSU3151

Alternate gene names: NA

Gene position: 3459048-3458395 (Counterclockwise)

Preceding gene: 39998242

Following gene: 39998240

Centisome position: 90.69

GC content: 66.67

Gene sequence:

>654_bases
ATGAACAGGAAGACCATTGTTATCCCCGCCCTTTATCTAACCCTTCTCTCCGCCGGGGTCACCCTGTCCGCCGGCAGCGC
CCGGGCCCACTGCGACACCATGGACGGCCCGGTCATCCAGGATGCCCGTATCGCCCTGAAGAAGAACGACGTCACCCCGG
TCCTCAAATGGGTCCGGGAGAAGGATGAGCCCACGGTCCGCGCTTCCTTCAAAGAAGCCGTAGCCGCAGCGCAGAAGGGG
ACGAAGGCGAAGGAGGCGGCCGAGCACCGCTTTTTCACCTCGCTGGTGAAGGTCCACCGGACCGCAGAAGGGGCTCCCTT
TACCGGGCTCAAACCCGCCGGCACGGTGGAGCCCCCGGTGGCGGCGGCCGATGAGGCCCTGGCGTCGGGGTCATCGACCG
AACTCGTGAAGATCGTCACCGATGCGGTTGCCGCCGGTATCCGCGAGCGCTTCGACCGGGTTGTCGAGGCGAAGAAGCAC
AAGGACGAGAGCGTGGCGGCCGGCCGGAAGTACGTGGCAGCCTACGTGGAGTACACTCACTACGTGGAGCGCCTCCACCA
GGCCGCGGAAGGACACGCCGCCCACCATGGCGGTCCGACCGGGACGAAGGCGCCTCACGGCCACGGCGATGCCCATGTGA
GCCACGGCCACTGA

Upstream 100 bases:

>100_bases
AGGCCCTTTGCTGGGGGCTCGTTGCGGCGGCCGCCCTGCTCTGGAAAAGAGAGTGAGGCAGTCTCCACCCATCACAACGA
CGTGAAGGAGAACCGGAACC

Downstream 100 bases:

>100_bases
TCGCGCCGTTCATTGATCCAGGCATGGAGGCCGTGCGCGCTTGAAAAAACGGATCACCCGGTTACCCGGCAAGATGAAAG
GGCAGGGGAGGAACAGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNRKTIVIPALYLTLLSAGVTLSAGSARAHCDTMDGPVIQDARIALKKNDVTPVLKWVREKDEPTVRASFKEAVAAAQKG
TKAKEAAEHRFFTSLVKVHRTAEGAPFTGLKPAGTVEPPVAAADEALASGSSTELVKIVTDAVAAGIRERFDRVVEAKKH
KDESVAAGRKYVAAYVEYTHYVERLHQAAEGHAAHHGGPTGTKAPHGHGDAHVSHGH

Sequences:

>Translated_217_residues
MNRKTIVIPALYLTLLSAGVTLSAGSARAHCDTMDGPVIQDARIALKKNDVTPVLKWVREKDEPTVRASFKEAVAAAQKG
TKAKEAAEHRFFTSLVKVHRTAEGAPFTGLKPAGTVEPPVAAADEALASGSSTELVKIVTDAVAAGIRERFDRVVEAKKH
KDESVAAGRKYVAAYVEYTHYVERLHQAAEGHAAHHGGPTGTKAPHGHGDAHVSHGH
>Mature_217_residues
MNRKTIVIPALYLTLLSAGVTLSAGSARAHCDTMDGPVIQDARIALKKNDVTPVLKWVREKDEPTVRASFKEAVAAAQKG
TKAKEAAEHRFFTSLVKVHRTAEGAPFTGLKPAGTVEPPVAAADEALASGSSTELVKIVTDAVAAGIRERFDRVVEAKKH
KDESVAAGRKYVAAYVEYTHYVERLHQAAEGHAAHHGGPTGTKAPHGHGDAHVSHGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23072; Mature: 23072

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKTIVIPALYLTLLSAGVTLSAGSARAHCDTMDGPVIQDARIALKKNDVTPVLKWVRE
CCCCEEEHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHC
KDEPTVRASFKEAVAAAQKGTKAKEAAEHRFFTSLVKVHRTAEGAPFTGLKPAGTVEPPV
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
AAADEALASGSSTELVKIVTDAVAAGIRERFDRVVEAKKHKDESVAAGRKYVAAYVEYTH
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YVERLHQAAEGHAAHHGGPTGTKAPHGHGDAHVSHGH
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRKTIVIPALYLTLLSAGVTLSAGSARAHCDTMDGPVIQDARIALKKNDVTPVLKWVRE
CCCCEEEHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHC
KDEPTVRASFKEAVAAAQKGTKAKEAAEHRFFTSLVKVHRTAEGAPFTGLKPAGTVEPPV
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
AAADEALASGSSTELVKIVTDAVAAGIRERFDRVVEAKKHKDESVAAGRKYVAAYVEYTH
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YVERLHQAAEGHAAHHGGPTGTKAPHGHGDAHVSHGH
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA