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The map label for this gene is 39998231

Identifier: 39998231

GI number: 39998231

Start: 3449070

End: 3449546

Strand: Reverse

Name: 39998231

Synonym: GSU3141

Alternate gene names: NA

Gene position: 3449546-3449070 (Counterclockwise)

Preceding gene: 39998232

Following gene: 39998230

Centisome position: 90.44

GC content: 66.04

Gene sequence:

>477_bases
ATGACGCTCATTCGACTGACTCTGTTTCTGACGGCCGTGCTCGCGACAACTCACGCCTTCGCGGCTCGGCAGGCGACGCC
GGTTGCCGAATCAGAGGTACGGCTGGCCCTGGAGTCGATCCTCGATCTCTGGCGCGACGGTAACTACGATGCCCTCTACG
AACGGACGAGCATCACCGGGGGCGGGAGTCGCGAAGCATTTGCGCGCCGCCTTGCCGGAGCCTCGCGCCGACCGGCGTGC
TGCTGGGAGAAGATGCAGGAGGTTCGGGTGATGGTGCGCGGCACTGATTCCGTCTCCGTCCGGGCCAGCTTCGGCCTGGA
GGGAGGACCGGGCGGCACCAATCACGTGACGCGGGCCATCCGCCTCGTTCGGGAGGACGGCGTCTGGAAGGCGTCGCGGG
CTGATATCCTTGCCCTGGCAGGTGAAAAACGGGCAACGTACCGCTATGTGAAGCAGGAGGGGAACGCCGGACCGTAG

Upstream 100 bases:

>100_bases
ACGATGCGTGGCCGCCTGTCCCATGCCGGGTCGGGAAAGGGCTTGCGGGGGGGCGGGAGATTCGCTATGGTGAGAGCACA
TTAATCCATGGAGGGATTTC

Downstream 100 bases:

>100_bases
CTGATCCGGGAGGAATGTCTCCCCGCCCCGCGGTTCCGGTCATGCGGCGGGGCGGGCTTCCGGGGCAGCCCTTGGTATCG
GCCGGTTTGATGGTATAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTLIRLTLFLTAVLATTHAFAARQATPVAESEVRLALESILDLWRDGNYDALYERTSITGGGSREAFARRLAGASRRPAC
CWEKMQEVRVMVRGTDSVSVRASFGLEGGPGGTNHVTRAIRLVREDGVWKASRADILALAGEKRATYRYVKQEGNAGP

Sequences:

>Translated_158_residues
MTLIRLTLFLTAVLATTHAFAARQATPVAESEVRLALESILDLWRDGNYDALYERTSITGGGSREAFARRLAGASRRPAC
CWEKMQEVRVMVRGTDSVSVRASFGLEGGPGGTNHVTRAIRLVREDGVWKASRADILALAGEKRATYRYVKQEGNAGP
>Mature_157_residues
TLIRLTLFLTAVLATTHAFAARQATPVAESEVRLALESILDLWRDGNYDALYERTSITGGGSREAFARRLAGASRRPACC
WEKMQEVRVMVRGTDSVSVRASFGLEGGPGGTNHVTRAIRLVREDGVWKASRADILALAGEKRATYRYVKQEGNAGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17268; Mature: 17137

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLIRLTLFLTAVLATTHAFAARQATPVAESEVRLALESILDLWRDGNYDALYERTSITG
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCC
GGSREAFARRLAGASRRPACCWEKMQEVRVMVRGTDSVSVRASFGLEGGPGGTNHVTRAI
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHH
RLVREDGVWKASRADILALAGEKRATYRYVKQEGNAGP
HHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TLIRLTLFLTAVLATTHAFAARQATPVAESEVRLALESILDLWRDGNYDALYERTSITG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCC
GGSREAFARRLAGASRRPACCWEKMQEVRVMVRGTDSVSVRASFGLEGGPGGTNHVTRAI
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHH
RLVREDGVWKASRADILALAGEKRATYRYVKQEGNAGP
HHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA