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The map label for this gene is 39998211

Identifier: 39998211

GI number: 39998211

Start: 3423035

End: 3423499

Strand: Direct

Name: 39998211

Synonym: GSU3121

Alternate gene names: NA

Gene position: 3423035-3423499 (Clockwise)

Preceding gene: 39998210

Following gene: 39998217

Centisome position: 89.75

GC content: 60.43

Gene sequence:

>465_bases
ATGGTAGACAGCATTGGCGGAACCGGGATCAGCATGGGCCACATGAGCGGCATGAAGCGACCCGACCCGAAGGAGATGTT
CAAGAAGGTGGATACCGATGGCGACGGGGCAGTGTCCCAGACGGAACTGCAGGCGATGGTCGAGAAGATGCAGGAGCGGA
CCGGCCAATCGATCAACGTGGAGGAGAGTTTCACCAATGCCGACAGCGACGGCAGCGGCTCCCTCAGCGAAGAGGAACTG
AAGGGATTCAGGGAGAGCATGCGGCCGCCCCACGAGCGGGAGGCCATGATGGGTGGCGAACCGATGGATGAAAGCGCCAC
CGCCCTCAAGGACGCCCTCCAGTCGTACCTGGCGAACGCCGACGATCAATCCATCGCTGAGCTGATCAGCTTCCTGAAGG
GAGCATCGGACTCGGACAGCAGCAGTTCTTCCACATCAACGTCGCTGCTAAGCATCACAACCTGA

Upstream 100 bases:

>100_bases
GACCCCGCCCCGACCGTCCCGGCATGGAGTGAACGACGGCTACCCGATAATGAACAGGGGGCCACGCCGCGCTTCCCCCA
TTTCGCAAAGGAGACAGACC

Downstream 100 bases:

>100_bases
CGCACCATATCCTCCCCGGCTTCAAACGGCTAAACCCTGCTCCCTCGGGCGGGGTTTAGCCGTTTTTGCCTCTCTGGCTT
CAGCTGCAACCAGCGCAGGC

Product: EF hand domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MVDSIGGTGISMGHMSGMKRPDPKEMFKKVDTDGDGAVSQTELQAMVEKMQERTGQSINVEESFTNADSDGSGSLSEEEL
KGFRESMRPPHEREAMMGGEPMDESATALKDALQSYLANADDQSIAELISFLKGASDSDSSSSSTSTSLLSITT

Sequences:

>Translated_154_residues
MVDSIGGTGISMGHMSGMKRPDPKEMFKKVDTDGDGAVSQTELQAMVEKMQERTGQSINVEESFTNADSDGSGSLSEEEL
KGFRESMRPPHEREAMMGGEPMDESATALKDALQSYLANADDQSIAELISFLKGASDSDSSSSSTSTSLLSITT
>Mature_154_residues
MVDSIGGTGISMGHMSGMKRPDPKEMFKKVDTDGDGAVSQTELQAMVEKMQERTGQSINVEESFTNADSDGSGSLSEEEL
KGFRESMRPPHEREAMMGGEPMDESATALKDALQSYLANADDQSIAELISFLKGASDSDSSSSSTSTSLLSITT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16398; Mature: 16398

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDSIGGTGISMGHMSGMKRPDPKEMFKKVDTDGDGAVSQTELQAMVEKMQERTGQSINV
CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
EESFTNADSDGSGSLSEEELKGFRESMRPPHEREAMMGGEPMDESATALKDALQSYLANA
HHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
DDQSIAELISFLKGASDSDSSSSSTSTSLLSITT
CHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECC
>Mature Secondary Structure
MVDSIGGTGISMGHMSGMKRPDPKEMFKKVDTDGDGAVSQTELQAMVEKMQERTGQSINV
CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
EESFTNADSDGSGSLSEEELKGFRESMRPPHEREAMMGGEPMDESATALKDALQSYLANA
HHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
DDQSIAELISFLKGASDSDSSSSSTSTSLLSITT
CHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA