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The map label for this gene is baeR [H]

Identifier: 39998208

GI number: 39998208

Start: 3420191

End: 3420874

Strand: Reverse

Name: baeR [H]

Synonym: GSU3118

Alternate gene names: 39998208

Gene position: 3420874-3420191 (Counterclockwise)

Preceding gene: 39998209

Following gene: 39998206

Centisome position: 89.69

GC content: 62.43

Gene sequence:

>684_bases
ATGACCGGAACGATTCTCATTGTGGAGGACGAGGAGAAGATTGCCACCCTGCTGCGCGATTATCTGCGATTGGCGGGATT
TGACGTCTGTTGTCTGGCGGGAGGTGCCGAGGCTGCGCCGTGGGTGCGCGAACATGCACCGGACCTCGTTCTGCTCGACC
TGATGCTGCCGGGCCGCGATGGCCTGGAGATCTGCAAGGATGTCCGCGTCTTTTCCAGTGTGCCGATCATCATGATCACG
GCGCGGATCGAGGAGATCGACCGCCTGCTCGGCCTTGAACTGGGGGCGGACGACTACATCTGCAAGCCCTTCAGTCCCCG
CGAGGTGGTGGCGCGGGTGAAGGCGGTCCTGCGCCGTAGCGGACCGGGTCAGACAACGGCACTGGCCGGTCTCGTCATGG
ACGGGGCATGCTACCGTGCCGCCCTTGACGGTCACGAACTGGATTTGACCGCCGTCGAGTTCAAGCTTCTCCAGTTCCTG
GCGGCCAGCCCCGGCAGGATCTACAGCCGCCAGCAACTCATGGACCGCATCTACCCCGACGAGCGGGTGGTTGCCGACCG
TACCATCGACAGCCACATCAAAAAACTGCGGAAAAAGATCGCGGATGTCGCTCCCGGCGAGGATCTGATCCATTCAGTGT
ACGGGGTGGGGTACAAGTTCGAACGGGCATCGCGCCGCGAATGA

Upstream 100 bases:

>100_bases
GGAACATTGTCGAGGCTCACAACGGCACCATCACGGCCCGTTACTCGCCCCTGGGCGGGGTCTGGATTGCCGTGACGCTG
CCGGTCGGGGAGCATCAGCC

Downstream 100 bases:

>100_bases
AAAAAAGAGCCGCGGTGCAGAGACGCCGCGGCTCGTGGGTGCGTAGAAAAAAGCAGGATGTACTAAAACGGAATATCGTC
GTCCGGGTTGAACGCCGGCT

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTGTILIVEDEEKIATLLRDYLRLAGFDVCCLAGGAEAAPWVREHAPDLVLLDLMLPGRDGLEICKDVRVFSSVPIIMIT
ARIEEIDRLLGLELGADDYICKPFSPREVVARVKAVLRRSGPGQTTALAGLVMDGACYRAALDGHELDLTAVEFKLLQFL
AASPGRIYSRQQLMDRIYPDERVVADRTIDSHIKKLRKKIADVAPGEDLIHSVYGVGYKFERASRRE

Sequences:

>Translated_227_residues
MTGTILIVEDEEKIATLLRDYLRLAGFDVCCLAGGAEAAPWVREHAPDLVLLDLMLPGRDGLEICKDVRVFSSVPIIMIT
ARIEEIDRLLGLELGADDYICKPFSPREVVARVKAVLRRSGPGQTTALAGLVMDGACYRAALDGHELDLTAVEFKLLQFL
AASPGRIYSRQQLMDRIYPDERVVADRTIDSHIKKLRKKIADVAPGEDLIHSVYGVGYKFERASRRE
>Mature_226_residues
TGTILIVEDEEKIATLLRDYLRLAGFDVCCLAGGAEAAPWVREHAPDLVLLDLMLPGRDGLEICKDVRVFSSVPIIMITA
RIEEIDRLLGLELGADDYICKPFSPREVVARVKAVLRRSGPGQTTALAGLVMDGACYRAALDGHELDLTAVEFKLLQFLA
ASPGRIYSRQQLMDRIYPDERVVADRTIDSHIKKLRKKIADVAPGEDLIHSVYGVGYKFERASRRE

Specific function: Member of the two-component regulatory system BaeS/BaeR. Activates the mdtABCD operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=54.9107142857143, Blast_Score=252, Evalue=1e-68,
Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=41.2280701754386, Blast_Score=168, Evalue=2e-43,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=41.4414414414414, Blast_Score=168, Evalue=3e-43,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=38.7665198237885, Blast_Score=148, Evalue=2e-37,
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=38.7931034482759, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=33.0434782608696, Blast_Score=134, Evalue=4e-33,
Organism=Escherichia coli, GI87082012, Length=217, Percent_Identity=35.0230414746544, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=35.7142857142857, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=35.3711790393013, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1789402, Length=219, Percent_Identity=34.2465753424658, Blast_Score=123, Evalue=8e-30,
Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=34.9557522123894, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=32.3275862068966, Blast_Score=111, Evalue=3e-26,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=35.1351351351351, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1790552, Length=221, Percent_Identity=34.3891402714932, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1788550, Length=115, Percent_Identity=33.9130434782609, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25209; Mature: 25077

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTILIVEDEEKIATLLRDYLRLAGFDVCCLAGGAEAAPWVREHAPDLVLLDLMLPGRD
CCCEEEEEECHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHCCCCEEEEEEECCCCC
GLEICKDVRVFSSVPIIMITARIEEIDRLLGLELGADDYICKPFSPREVVARVKAVLRRS
HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHCC
GPGQTTALAGLVMDGACYRAALDGHELDLTAVEFKLLQFLAASPGRIYSRQQLMDRIYPD
CCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
ERVVADRTIDSHIKKLRKKIADVAPGEDLIHSVYGVGYKFERASRRE
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECHHCCCC
>Mature Secondary Structure 
TGTILIVEDEEKIATLLRDYLRLAGFDVCCLAGGAEAAPWVREHAPDLVLLDLMLPGRD
CCEEEEEECHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHCCCCEEEEEEECCCCC
GLEICKDVRVFSSVPIIMITARIEEIDRLLGLELGADDYICKPFSPREVVARVKAVLRRS
HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHCC
GPGQTTALAGLVMDGACYRAALDGHELDLTAVEFKLLQFLAASPGRIYSRQQLMDRIYPD
CCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
ERVVADRTIDSHIKKLRKKIADVAPGEDLIHSVYGVGYKFERASRRE
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]