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The map label for this gene is ssb-2 [H]

Identifier: 39998207

GI number: 39998207

Start: 3419688

End: 3420128

Strand: Direct

Name: ssb-2 [H]

Synonym: GSU3117

Alternate gene names: 39998207

Gene position: 3419688-3420128 (Clockwise)

Preceding gene: 308513337

Following gene: 39998210

Centisome position: 89.66

GC content: 64.4

Gene sequence:

>441_bases
ATGGCAAGTCTCAACAAAGTGATGCTCATCGGCAATCTCGGGAAGGATCCCGAGGTTCGCTACACGCCTGCCGGCACGGC
AGTTGCCAGCTTCTCCCTTGCCACCACCGAAAAATTCAAGAACAGGAACGGCGAATTCGAGGAAAAGACCGAATGGCACA
ACGTGGTCCTCTGGGGCCGCCAGGCCGAAATCGCCGGTGAATACCTGGCCAAGGGGCGGACCGTTTTCATCGAGGGGCGG
CTCCAGACCCGCAAGTGGCAGGACAAGGACGGCCGCGACCGCTGGACCACCGAGGTGGTGGGCGAGCGGATGCAGATGCT
CGGCGGCAAGGGCGAGGGGGGCGGCGGACGCGCAGGCGGACGCGGCGGCCAGGAGAGCGGCTTCGGCGGCCCCTCCTATG
ACGAGCCGGCGTTCAACCCGGACGACGATATTCCGTTTTAG

Upstream 100 bases:

>100_bases
CAACAATCCATTGAACAAAGCGGATGTTAGTGATAGGGTACCGTCGTTCTTTCGACGCTTTGATCACCAATCGCAATTCC
CATACTCAGGAGGTCGCATT

Downstream 100 bases:

>100_bases
TACATCCTGCTTTTTTCTACGCACCCACGAGCCGCGGCGTCTCTGCACCGCGGCTCTTTTTTTCATTCGCGGCGCGATGC
CCGTTCGAACTTGTACCCCA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MASLNKVMLIGNLGKDPEVRYTPAGTAVASFSLATTEKFKNRNGEFEEKTEWHNVVLWGRQAEIAGEYLAKGRTVFIEGR
LQTRKWQDKDGRDRWTTEVVGERMQMLGGKGEGGGGRAGGRGGQESGFGGPSYDEPAFNPDDDIPF

Sequences:

>Translated_146_residues
MASLNKVMLIGNLGKDPEVRYTPAGTAVASFSLATTEKFKNRNGEFEEKTEWHNVVLWGRQAEIAGEYLAKGRTVFIEGR
LQTRKWQDKDGRDRWTTEVVGERMQMLGGKGEGGGGRAGGRGGQESGFGGPSYDEPAFNPDDDIPF
>Mature_145_residues
ASLNKVMLIGNLGKDPEVRYTPAGTAVASFSLATTEKFKNRNGEFEEKTEWHNVVLWGRQAEIAGEYLAKGRTVFIEGRL
QTRKWQDKDGRDRWTTEVVGERMQMLGGKGEGGGGRAGGRGGQESGFGGPSYDEPAFNPDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=180, Percent_Identity=50, Blast_Score=144, Evalue=2e-36,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16029; Mature: 15898

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLNKVMLIGNLGKDPEVRYTPAGTAVASFSLATTEKFKNRNGEFEEKTEWHNVVLWGR
CCCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECC
QAEIAGEYLAKGRTVFIEGRLQTRKWQDKDGRDRWTTEVVGERMQMLGGKGEGGGGRAGG
CHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
RGGQESGFGGPSYDEPAFNPDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASLNKVMLIGNLGKDPEVRYTPAGTAVASFSLATTEKFKNRNGEFEEKTEWHNVVLWGR
CCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECC
QAEIAGEYLAKGRTVFIEGRLQTRKWQDKDGRDRWTTEVVGERMQMLGGKGEGGGGRAGG
CHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
RGGQESGFGGPSYDEPAFNPDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]