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The map label for this gene is motB [H]

Identifier: 39998119

GI number: 39998119

Start: 3332063

End: 3332863

Strand: Direct

Name: motB [H]

Synonym: GSU3028

Alternate gene names: 39998119

Gene position: 3332063-3332863 (Clockwise)

Preceding gene: 39998118

Following gene: 39998122

Centisome position: 87.36

GC content: 60.67

Gene sequence:

>801_bases
ATGGCCAAGCCGAAGAAGCATGAGAAAGAACCCAACCACGAGCGGTGGCTCGTCTCCTACGCGGACTTCATCACTCTGCT
GTTTGCCGTGTTCGTGACCCTCTACGCCATGGGCCAGTCGGACAAGGAAAAGATCGAGCAAGTCATGCAGTCCATGCGGG
AATCGTTCGGGTTCACCGCCACCGGCTCGGCACCCCGGCCGGCAGTACTGGATTCGTCCGACATGCGGATCATGCCGTCA
ATCGCGCCGGATCTCACCAACAAGGGACGGGGTCAGGGCAAAAATGCCGACAGCAAGGGGAGGATCCGGGCAACGGAGAA
GGATTTCCAGGCCATCAAATCGTCCATCGAGGCCTATCTCATCAAGCAGGGAGCCCAGGATAAGGTTAATGTGGGCATAA
ACCGGCGGGGTCTGGTGGTGAGTCTCAAGGAAGCGGGGTTCTTCGACTCGGGGAGCGCCATCGTCAAGGAAAGCGCCTAT
CCGCTCCTGGCCAAGGTTGCCGAGTCTCTGTCCGCCTACTCCAACCCGGTCCGGGTAGAGGGGCATACCGACACCATGCC
GATCAGCTCGGTCCAGTTCCCCTCCAACTGGGAACTCTCCACGGCCCGAGCCACCAACATTGTCCACTTCCTCACCCGCT
CCTACGACTTTGATCCCGGTGCCATTTCAGCTGCCGGCTTCGGCGAATACCGCCCCATCGCCGACAACAACACCGCTGAA
GGCCGCTCCAAGAACCGGCGGGTGGATATCGTTCTCCTCTCCGGCGAAGGGGAGCGGGGAGAACCGGAGAGGGCGCAGTA
A

Upstream 100 bases:

>100_bases
CATCGCCATCCAGAACGGCGAGAACCCCCACTTCATCGAGCAGAAGCTCAAGGCGTTCCTCCAGCACGGCGCCGGTGACA
AGAAGGGATAGCATTCCGTC

Downstream 100 bases:

>100_bases
CGCCCGTCCCTGCGGCCGCGTCTCGTTCCGTTTGCACCTTCTACAACACGACAACCGACTTCGTGCGGGTTCTTTTCACA
CGGATCCCCCGCCCAGCCCC

Product: chemotaxis protein MotB

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MAKPKKHEKEPNHERWLVSYADFITLLFAVFVTLYAMGQSDKEKIEQVMQSMRESFGFTATGSAPRPAVLDSSDMRIMPS
IAPDLTNKGRGQGKNADSKGRIRATEKDFQAIKSSIEAYLIKQGAQDKVNVGINRRGLVVSLKEAGFFDSGSAIVKESAY
PLLAKVAESLSAYSNPVRVEGHTDTMPISSVQFPSNWELSTARATNIVHFLTRSYDFDPGAISAAGFGEYRPIADNNTAE
GRSKNRRVDIVLLSGEGERGEPERAQ

Sequences:

>Translated_266_residues
MAKPKKHEKEPNHERWLVSYADFITLLFAVFVTLYAMGQSDKEKIEQVMQSMRESFGFTATGSAPRPAVLDSSDMRIMPS
IAPDLTNKGRGQGKNADSKGRIRATEKDFQAIKSSIEAYLIKQGAQDKVNVGINRRGLVVSLKEAGFFDSGSAIVKESAY
PLLAKVAESLSAYSNPVRVEGHTDTMPISSVQFPSNWELSTARATNIVHFLTRSYDFDPGAISAAGFGEYRPIADNNTAE
GRSKNRRVDIVLLSGEGERGEPERAQ
>Mature_265_residues
AKPKKHEKEPNHERWLVSYADFITLLFAVFVTLYAMGQSDKEKIEQVMQSMRESFGFTATGSAPRPAVLDSSDMRIMPSI
APDLTNKGRGQGKNADSKGRIRATEKDFQAIKSSIEAYLIKQGAQDKVNVGINRRGLVVSLKEAGFFDSGSAIVKESAYP
LLAKVAESLSAYSNPVRVEGHTDTMPISSVQFPSNWELSTARATNIVHFLTRSYDFDPGAISAAGFGEYRPIADNNTAEG
RSKNRRVDIVLLSGEGERGEPERAQ

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 29222; Mature: 29091

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPKKHEKEPNHERWLVSYADFITLLFAVFVTLYAMGQSDKEKIEQVMQSMRESFGFTA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEE
TGSAPRPAVLDSSDMRIMPSIAPDLTNKGRGQGKNADSKGRIRATEKDFQAIKSSIEAYL
CCCCCCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHH
IKQGAQDKVNVGINRRGLVVSLKEAGFFDSGSAIVKESAYPLLAKVAESLSAYSNPVRVE
HHCCCCCCEECCCCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEC
GHTDTMPISSVQFPSNWELSTARATNIVHFLTRSYDFDPGAISAAGFGEYRPIADNNTAE
CCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCC
GRSKNRRVDIVLLSGEGERGEPERAQ
CCCCCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
AKPKKHEKEPNHERWLVSYADFITLLFAVFVTLYAMGQSDKEKIEQVMQSMRESFGFTA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEE
TGSAPRPAVLDSSDMRIMPSIAPDLTNKGRGQGKNADSKGRIRATEKDFQAIKSSIEAYL
CCCCCCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHH
IKQGAQDKVNVGINRRGLVVSLKEAGFFDSGSAIVKESAYPLLAKVAESLSAYSNPVRVE
HHCCCCCCEECCCCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEC
GHTDTMPISSVQFPSNWELSTARATNIVHFLTRSYDFDPGAISAAGFGEYRPIADNNTAE
CCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCC
GRSKNRRVDIVLLSGEGERGEPERAQ
CCCCCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1624413; 9384377 [H]