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The map label for this gene is sirB [H]

Identifier: 39998091

GI number: 39998091

Start: 3293294

End: 3293677

Strand: Reverse

Name: sirB [H]

Synonym: GSU3000

Alternate gene names: 39998091

Gene position: 3293677-3293294 (Counterclockwise)

Preceding gene: 39998092

Following gene: 39998090

Centisome position: 86.35

GC content: 65.62

Gene sequence:

>384_bases
ATGAAGACTGCTATTCTGTTGATGGCCCATGGCAGCCGTATCCCCGAGGCGAATGACGCCGTGCGGGAGATCGCCGCCAT
GGTGAAGGAAATGACTGGGTTCGAGATTGTGGAGGTGTCGTTCCGGGAACAGCACCTGCCGGACATCCAGCAAGGGATCG
ATGCCTGCGTGGCCCAAGGCGCGGAGCGGGTTCTGCTGATGCCCTACTTCCTCTTTGTGGGGGCCCACGTGCAGGAGGAC
CTCCCCGAGGAGATGGCCGAGGCCCGCACCCGTTACCCTGCCGTGGAGTTCGCCATGGGAGGGCATCTGGGCGTGCACCG
CAAGCTGGCCGAGGTGGCGGCTGACCGGATCGCCGAAGCCCTCGCCGCCACGGGGTGGCGCTGA

Upstream 100 bases:

>100_bases
CTGAAGCACGAAGATGGTGTCCCGTTCCGGCGCACGCCCCTCACCATCGGCGAGGCCCGGCGGGAAATCATGGAATTGAT
GGAAACCACAAGGAGTTGAC

Downstream 100 bases:

>100_bases
TGTCGGTCCACCTCCGCCCCGAGGAGATCGAGGCCGAGTCGTTCCGGATCATCGATGCCGAAGCGGGCTCCCACTCCTGG
GGGCCGGACCAGTGGCCGGT

Product: cbiX protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKTAILLMAHGSRIPEANDAVREIAAMVKEMTGFEIVEVSFREQHLPDIQQGIDACVAQGAERVLLMPYFLFVGAHVQED
LPEEMAEARTRYPAVEFAMGGHLGVHRKLAEVAADRIAEALAATGWR

Sequences:

>Translated_127_residues
MKTAILLMAHGSRIPEANDAVREIAAMVKEMTGFEIVEVSFREQHLPDIQQGIDACVAQGAERVLLMPYFLFVGAHVQED
LPEEMAEARTRYPAVEFAMGGHLGVHRKLAEVAADRIAEALAATGWR
>Mature_127_residues
MKTAILLMAHGSRIPEANDAVREIAAMVKEMTGFEIVEVSFREQHLPDIQQGIDACVAQGAERVLLMPYFLFVGAHVQED
LPEEMAEARTRYPAVEFAMGGHLGVHRKLAEVAADRIAEALAATGWR

Specific function: Chelates iron to the siroheme precursor [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. SirB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.4 [H]

Molecular weight: Translated: 13986; Mature: 13986

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAILLMAHGSRIPEANDAVREIAAMVKEMTGFEIVEVSFREQHLPDIQQGIDACVAQG
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHHHHCC
AERVLLMPYFLFVGAHVQEDLPEEMAEARTRYPAVEFAMGGHLGVHRKLAEVAADRIAEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
LAATGWR
HHHCCCC
>Mature Secondary Structure
MKTAILLMAHGSRIPEANDAVREIAAMVKEMTGFEIVEVSFREQHLPDIQQGIDACVAQG
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHHHHCC
AERVLLMPYFLFVGAHVQEDLPEEMAEARTRYPAVEFAMGGHLGVHRKLAEVAADRIAEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
LAATGWR
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA