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The map label for this gene is yraQ [C]

Identifier: 39998046

GI number: 39998046

Start: 3253679

End: 3254626

Strand: Direct

Name: yraQ [C]

Synonym: GSU2955

Alternate gene names: 39998046

Gene position: 3253679-3254626 (Clockwise)

Preceding gene: 39998045

Following gene: 39998047

Centisome position: 85.31

GC content: 57.17

Gene sequence:

>948_bases
GTGTTCAAACCCTTCGCCGACTACCTTGTTTTCGATCTCTTCGGCCTCACCCCCGGCAGCCACCTGGGAGATGCCCTCAA
TTTCTTCATCTACGACACCCTTAAGATCTTTTTCCTCCTGACCGTCATCATCTTCGTCGTGGCAATCATCCGCTCCTGGT
TCCCGCCGGAGCGGACAAAACGCATCCTCTCCCACAAGCGGGAATATGTCGGAAACATCATGGCGGCACTCCTCGGGGTA
GTCACCCCCTTTTGCTCCTGTTCGGCGGTGCCCCTCTTCATCGGCTTTGTGGAATCGGGAGTCCCCCTAGGCGTCACCTT
CTCGTTCCTCATTTCTTCTCCCATGGTGAACGAGGTGGCTCTCATCATGCTATGGGGCATGTTCGGCTGGAAAATCGCGC
TACTCTACATCGGCACGGGACTCCTGGTGGCAATTGTTTCGGGCGCAGTCATCGGCCGGTTAAAGATGGAAAGATACGTC
CAGGATTATGTCTGGGAAATGCAGGTGGGTAATGCCGAGATAGCTGAGCAAAGCTGGCCGGAGCGGTTCGCCTACGGCAA
GGAGTACACAATGGGGCTTCTGAAGAAAATCTGGCCCTACGTGATCGTTGGCATCGGCATTGGCGGCTTCATCCACGGCT
ACGTCCCCCAGGACTTCCTGGCACACTGGGCCGGTCGCGACAACCCCTTCGCAGTTCCCGTGGCCGTGGCCCTTGGGGTC
CCCCTCTACAGTAACGCCGCAGGAGTTATTCCCATTGTCCAGGCTCTGACAGCCAAGGGGATGGCCATGGGAACGGTCCT
CGCCTTCATGATGGCGGTGACGGCCCTGTCGCTCCCCGAAGCTATCATCCTGAAGAACGTCCTCAAAAATCGGCTCCTTG
CGGTCTTTTTCGGCACGGTCGCCGTGGCCATAACCATGGTAGGATACCTGTTCAACGCAATTCTGTAG

Upstream 100 bases:

>100_bases
GCCCCCTGGTGGAGGTGCCGGTGATGATCGGGCTGGTGAACGTGGCGTTCTGGCTGCAACGACACTGGTTCCGGGCCGCT
GCCTGAAAAGGGAGTATCAC

Downstream 100 bases:

>100_bases
TCGCTGGCGAAAGGAGATGCGGATCATGAAAATCGAAGTGCTCGGTACCGGCTGCGCCAAATGCAAAACCCTCTATGAAA
ATGTGCAAAAGGCCGTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Permease Family Protein; Permease Superfamily; Permease-Like Protein; Integral Membrane Protein

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MFKPFADYLVFDLFGLTPGSHLGDALNFFIYDTLKIFFLLTVIIFVVAIIRSWFPPERTKRILSHKREYVGNIMAALLGV
VTPFCSCSAVPLFIGFVESGVPLGVTFSFLISSPMVNEVALIMLWGMFGWKIALLYIGTGLLVAIVSGAVIGRLKMERYV
QDYVWEMQVGNAEIAEQSWPERFAYGKEYTMGLLKKIWPYVIVGIGIGGFIHGYVPQDFLAHWAGRDNPFAVPVAVALGV
PLYSNAAGVIPIVQALTAKGMAMGTVLAFMMAVTALSLPEAIILKNVLKNRLLAVFFGTVAVAITMVGYLFNAIL

Sequences:

>Translated_315_residues
MFKPFADYLVFDLFGLTPGSHLGDALNFFIYDTLKIFFLLTVIIFVVAIIRSWFPPERTKRILSHKREYVGNIMAALLGV
VTPFCSCSAVPLFIGFVESGVPLGVTFSFLISSPMVNEVALIMLWGMFGWKIALLYIGTGLLVAIVSGAVIGRLKMERYV
QDYVWEMQVGNAEIAEQSWPERFAYGKEYTMGLLKKIWPYVIVGIGIGGFIHGYVPQDFLAHWAGRDNPFAVPVAVALGV
PLYSNAAGVIPIVQALTAKGMAMGTVLAFMMAVTALSLPEAIILKNVLKNRLLAVFFGTVAVAITMVGYLFNAIL
>Mature_315_residues
MFKPFADYLVFDLFGLTPGSHLGDALNFFIYDTLKIFFLLTVIIFVVAIIRSWFPPERTKRILSHKREYVGNIMAALLGV
VTPFCSCSAVPLFIGFVESGVPLGVTFSFLISSPMVNEVALIMLWGMFGWKIALLYIGTGLLVAIVSGAVIGRLKMERYV
QDYVWEMQVGNAEIAEQSWPERFAYGKEYTMGLLKKIWPYVIVGIGIGGFIHGYVPQDFLAHWAGRDNPFAVPVAVALGV
PLYSNAAGVIPIVQALTAKGMAMGTVLAFMMAVTALSLPEAIILKNVLKNRLLAVFFGTVAVAITMVGYLFNAIL

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789541, Length=266, Percent_Identity=25.5639097744361, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34567; Mature: 34567

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHC
>Mature Secondary Structure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HHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA