| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is bcsP31 [H]
Identifier: 39997786
GI number: 39997786
Start: 2970258
End: 2971247
Strand: Reverse
Name: bcsP31 [H]
Synonym: GSU2692
Alternate gene names: 39997786
Gene position: 2971247-2970258 (Counterclockwise)
Preceding gene: 39997787
Following gene: 39997785
Centisome position: 77.9
GC content: 63.03
Gene sequence:
>990_bases ATGACCTGCTTCTCCAGATTCATACCGTTGAAACTGTCTCTTTTGGCGGCAGTGACACTGCTCCTGACGCCCGCGGCCCT TCCCGCATTTCCGCAGCACACGCTTTCAATCGGTTCCGGGAACACCACCGGTTCCTACTATGTCTCGTCCAGTGCCATAG CCAAGATATTCAACCGGCGCAGCGCCGAATACGGCATGCGGCTCGCCACCGTTTCGTCCCAGGGGTCGGTGGCCAATGTG GAAAGCGTCTCGGAGGGGAGAACGGCCTTCGGGATAGCCCAGGACGACGTACTGCGGGATGCGTCGCGGGGCGCCGGCAG ATGGGCGGGAAAGAGTCAACCGGGCCTGCGAGCCGTTCTCGGCCTTCCGGTTGAAGCCGTGACAGTCGTCGCCGCAGCGG ATGCCGGTATCAGCCGGATGGGAGACCTCAAGGGCAAGCGGGTCAACATCGGTGCCGAGGGATCCTTCGACCATGACTAT GCGGTGACCCTGCTCCGTCTCTCCGGCCTCGTTCCCTCAGACGTGGTCATCTCGACCCATCCCGCCTCGCTTGCCTCCGA ACTGCTGCAGAAGAACGATATCGACGCCTACATTTATACGGTGTCGCATCCGAACCTTGCCGTCATGGAGGCCAGCACCG GCCCCCGGAAGGTTGTCCTCGTGCCCCTCGACACCTCGCTGATCGAACGGGTGACGGCCGAAAACCCGCTTCTGCTGCCC GCGGTGGTTCCCACCAGTTCCTATCCGGTGCTGGAGCACGCCGGGGTGGTGCCGACCATCGGTATCCGGTCGATACTGTT CACCCGCTCCGACATGGCGGAGGAAACCGTTTATCGCCTGGTGCGGGATATCATGACGAACTTCGATCTTTTCAGGCGCC AGCACCCGTCCCTGCAGGTCCTTTCTCCCCGTGAGGCTGCCGACGCCGCGGTCATTCCCCTCCATCCCGGAGCCGAACGC TTTTTCCGGGAGGCGGGCACCGCCCCCTGA
Upstream 100 bases:
>100_bases CAAACACGGGAAAGGGTGGTATCCTTTCCGGTAGTGGTTCTGGCGAGACAGACTTAGCGTATCGAACATCCATCCTCCAC GCTAGAGGAGGAAGTGACCG
Downstream 100 bases:
>100_bases GCCGCGGGCGGTGCGCCCACAAACCGTTTTCCGGAGGACACCATGAAGCGGTTCATCGTCCTGTTTTTCCTGGCGGCGTG TTTCCCCCTGGCTCCGAACG
Product: immunogenic protein family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTCFSRFIPLKLSLLAAVTLLLTPAALPAFPQHTLSIGSGNTTGSYYVSSSAIAKIFNRRSAEYGMRLATVSSQGSVANV ESVSEGRTAFGIAQDDVLRDASRGAGRWAGKSQPGLRAVLGLPVEAVTVVAAADAGISRMGDLKGKRVNIGAEGSFDHDY AVTLLRLSGLVPSDVVISTHPASLASELLQKNDIDAYIYTVSHPNLAVMEASTGPRKVVLVPLDTSLIERVTAENPLLLP AVVPTSSYPVLEHAGVVPTIGIRSILFTRSDMAEETVYRLVRDIMTNFDLFRRQHPSLQVLSPREAADAAVIPLHPGAER FFREAGTAP
Sequences:
>Translated_329_residues MTCFSRFIPLKLSLLAAVTLLLTPAALPAFPQHTLSIGSGNTTGSYYVSSSAIAKIFNRRSAEYGMRLATVSSQGSVANV ESVSEGRTAFGIAQDDVLRDASRGAGRWAGKSQPGLRAVLGLPVEAVTVVAAADAGISRMGDLKGKRVNIGAEGSFDHDY AVTLLRLSGLVPSDVVISTHPASLASELLQKNDIDAYIYTVSHPNLAVMEASTGPRKVVLVPLDTSLIERVTAENPLLLP AVVPTSSYPVLEHAGVVPTIGIRSILFTRSDMAEETVYRLVRDIMTNFDLFRRQHPSLQVLSPREAADAAVIPLHPGAER FFREAGTAP >Mature_328_residues TCFSRFIPLKLSLLAAVTLLLTPAALPAFPQHTLSIGSGNTTGSYYVSSSAIAKIFNRRSAEYGMRLATVSSQGSVANVE SVSEGRTAFGIAQDDVLRDASRGAGRWAGKSQPGLRAVLGLPVEAVTVVAAADAGISRMGDLKGKRVNIGAEGSFDHDYA VTLLRLSGLVPSDVVISTHPASLASELLQKNDIDAYIYTVSHPNLAVMEASTGPRKVVLVPLDTSLIERVTAENPLLLPA VVPTSSYPVLEHAGVVPTIGIRSILFTRSDMAEETVYRLVRDIMTNFDLFRRQHPSLQVLSPREAADAAVIPLHPGAERF FREAGTAP
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 35032; Mature: 34900
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCFSRFIPLKLSLLAAVTLLLTPAALPAFPQHTLSIGSGNTTGSYYVSSSAIAKIFNRR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEECHHHHHHHHHHC SAEYGMRLATVSSQGSVANVESVSEGRTAFGIAQDDVLRDASRGAGRWAGKSQPGLRAVL CHHHCEEEEEECCCCCCCCHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHH GLPVEAVTVVAAADAGISRMGDLKGKRVNIGAEGSFDHDYAVTLLRLSGLVPSDVVISTH CCCHHHHEEEECCCCCHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEECC PASLASELLQKNDIDAYIYTVSHPNLAVMEASTGPRKVVLVPLDTSLIERVTAENPLLLP CHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCHHHHHHHHCCCCEEEE AVVPTSSYPVLEHAGVVPTIGIRSILFTRSDMAEETVYRLVRDIMTNFDLFRRQHPSLQV EECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LSPREAADAAVIPLHPGAERFFREAGTAP ECCCCCCCEEEEECCCCHHHHHHHCCCCC >Mature Secondary Structure TCFSRFIPLKLSLLAAVTLLLTPAALPAFPQHTLSIGSGNTTGSYYVSSSAIAKIFNRR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEECHHHHHHHHHHC SAEYGMRLATVSSQGSVANVESVSEGRTAFGIAQDDVLRDASRGAGRWAGKSQPGLRAVL CHHHCEEEEEECCCCCCCCHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHH GLPVEAVTVVAAADAGISRMGDLKGKRVNIGAEGSFDHDYAVTLLRLSGLVPSDVVISTH CCCHHHHEEEECCCCCHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEECC PASLASELLQKNDIDAYIYTVSHPNLAVMEASTGPRKVVLVPLDTSLIERVTAENPLLLP CHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCHHHHHHHHCCCCEEEE AVVPTSSYPVLEHAGVVPTIGIRSILFTRSDMAEETVYRLVRDIMTNFDLFRRQHPSLQV EECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LSPREAADAAVIPLHPGAERFFREAGTAP ECCCCCCCEEEEECCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]