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The map label for this gene is recJ [H]

Identifier: 39997708

GI number: 39997708

Start: 2883767

End: 2885503

Strand: Reverse

Name: recJ [H]

Synonym: GSU2614

Alternate gene names: 39997708

Gene position: 2885503-2883767 (Counterclockwise)

Preceding gene: 39997709

Following gene: 39997707

Centisome position: 75.65

GC content: 67.99

Gene sequence:

>1737_bases
ATGCACGCGGGCAACGAAAAAGTCTGGACCATACGGGAGCCGGACCGGGATGTGGTGGTCCGGCTCTCCCGGGATCTCTC
CCTTGATCCTCTCCTGGCCCGGCTGCTGGCCAACCGGGGGGTGACCGACGGAATCGACGGGCGGCGCTTTCTCGGTGCGA
CCCTGGCCGACCTCCGCGACCCGCTGCTGCTGCGCGGCATGGATGCCGCGGTGGAGCGCCTCTGCGCTGCCCTGCGCAAC
GGTGAGCAGGTCTGCGTGTACGGCGACTACGATGTGGACGGCGTGACCGGCACCGCCCTCCTGGTGAGTTTTTTCCGGGA
GGTGGGATTTACCTGCCGCTATCATATCCCCAAACGGCTCAGCGACGGCTACGGCCTCTCCGAGGACGGCATCCGCGCCG
TTGCGGAAAGGGGCGCGCGGGTGATCGTCACGGTCGATTGCGGCATCGGCTCCGTGGCAGAGGCCGATTTATGCGCCTCC
CTCGGCGTTGATCTCATCATCACCGACCACCACAGCCCGGGTCCCGAGCTGCCCCGGGCCCTGGCAGTCATCAATCCCCG
GCAGCCCGGCTGTTCCTATCCCTTCAAGTCCCTGGCCGGCGTCGGCGTCGCATTCAACCTCCTGATCGCCCTCCGGGGCC
GGTTGCGGGAGCAGGGGTGTTTCACTGCCGGTCCCGAGCCCAATCTCCGCCAGTATCTGGACCTCGTGGCCCTGGGAACC
ATCGCCGATGTGGTACCCTTGGTGGAGGAGAACCGGATCTTTGTTACGTACGGGTTGAAGGAAATGTCCGCCACGAGCCG
TGTGGGGGTGACTGCCCTCAAGGATGTGGCGGGAGTGGCCGGCCGGGTCGGTTGCGGCGCCGTGGGCTTCCGTCTGGCCC
CGCGCCTGAATGCCGCCGGTCGCCTGGAGGATGCCTCACTCGGCGTGGAGCTGCTCCTTACCGGCGACCGGAGCAGGGCG
GCCACCCTTGCGGCGGAGCTCGACCGGAGCAACGGGGAGCGGCAGGCCCTGGAGCGCTCCATCCTCGACGAGGCAACCGC
CATGGTGCGGGCAAACCCTGCCATGGCCAGCAAGAGGAGCATCGTCCTCGCCTCAGACGCCTGGCATCCCGGCGTGGTGG
GCATCGTGGCATCCCGGCTGGTGGACAGGTTTCATCGGCCCACCATTCTCATCGCCCTGCAGGACGGCACGGGACGCGGC
TCCGGGCGAAGCGTGCCCGCGCTCCATCTGCTGGATGCCCTGTCGGCGTGCGGCGAGCACCTGGAGAAGTTCGGCGGGCA
CCGGCAGGCGGCGGGCCTCTCCATTGACGAGGAAACCCTCCAGGCCTTCGTGGATCGGTTTGAAGACGTCTGTGCCGGAC
TGCTGGGTCCCGACGACCTGAAGCCGGTGGTGGCCGCTGACGCCGAGCTTGCCGCCGACGAGGTGACCCCGGCGCTCGTG
GACCTGATCGAGGCCCTGGAGCCGTTCGGCATGGGGAATCCGGAGCCGCTGTTCCTGCTGCGCGGCGCCACGATCTGTGG
CCGGCGGGTCGCCGGCGGGCATCACCTGCAACTGCGGCTGGACCTGGGGGGGCGCCAGGTGGATGCCGTCGGTTTCAACC
TCGCCGCCAGGGACGGTGCGCCCGGCGAGCGGGTGGACATTCTCTTTACGGCTGGCTGGAACAGCTGGAACGGCCGGCGA
AAATTCCAGCTCACTCTGAAGGATCTGAAACGATCGGGAGATGACCGTGCTTCGTGA

Upstream 100 bases:

>100_bases
CAGCCCAGCTCTTCGGCACCGGGCCCCATGTTCCGCTAGGCCGCACACCTCATCCCCGCTCCGGCGGGGATTTTTTTCGC
GCGGACGGTCGCGAGGAGCC

Downstream 100 bases:

>100_bases
GGAACGGTTCGAACGGGCGGAGAAAGTCATTCACCTGGGATTCTGGGTCAATGCCGTCCTGATGGTCATGAAACTTGCGG
CAGGGCACTTCGGCGGGTCG

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MHAGNEKVWTIREPDRDVVVRLSRDLSLDPLLARLLANRGVTDGIDGRRFLGATLADLRDPLLLRGMDAAVERLCAALRN
GEQVCVYGDYDVDGVTGTALLVSFFREVGFTCRYHIPKRLSDGYGLSEDGIRAVAERGARVIVTVDCGIGSVAEADLCAS
LGVDLIITDHHSPGPELPRALAVINPRQPGCSYPFKSLAGVGVAFNLLIALRGRLREQGCFTAGPEPNLRQYLDLVALGT
IADVVPLVEENRIFVTYGLKEMSATSRVGVTALKDVAGVAGRVGCGAVGFRLAPRLNAAGRLEDASLGVELLLTGDRSRA
ATLAAELDRSNGERQALERSILDEATAMVRANPAMASKRSIVLASDAWHPGVVGIVASRLVDRFHRPTILIALQDGTGRG
SGRSVPALHLLDALSACGEHLEKFGGHRQAAGLSIDEETLQAFVDRFEDVCAGLLGPDDLKPVVAADAELAADEVTPALV
DLIEALEPFGMGNPEPLFLLRGATICGRRVAGGHHLQLRLDLGGRQVDAVGFNLAARDGAPGERVDILFTAGWNSWNGRR
KFQLTLKDLKRSGDDRAS

Sequences:

>Translated_578_residues
MHAGNEKVWTIREPDRDVVVRLSRDLSLDPLLARLLANRGVTDGIDGRRFLGATLADLRDPLLLRGMDAAVERLCAALRN
GEQVCVYGDYDVDGVTGTALLVSFFREVGFTCRYHIPKRLSDGYGLSEDGIRAVAERGARVIVTVDCGIGSVAEADLCAS
LGVDLIITDHHSPGPELPRALAVINPRQPGCSYPFKSLAGVGVAFNLLIALRGRLREQGCFTAGPEPNLRQYLDLVALGT
IADVVPLVEENRIFVTYGLKEMSATSRVGVTALKDVAGVAGRVGCGAVGFRLAPRLNAAGRLEDASLGVELLLTGDRSRA
ATLAAELDRSNGERQALERSILDEATAMVRANPAMASKRSIVLASDAWHPGVVGIVASRLVDRFHRPTILIALQDGTGRG
SGRSVPALHLLDALSACGEHLEKFGGHRQAAGLSIDEETLQAFVDRFEDVCAGLLGPDDLKPVVAADAELAADEVTPALV
DLIEALEPFGMGNPEPLFLLRGATICGRRVAGGHHLQLRLDLGGRQVDAVGFNLAARDGAPGERVDILFTAGWNSWNGRR
KFQLTLKDLKRSGDDRAS
>Mature_578_residues
MHAGNEKVWTIREPDRDVVVRLSRDLSLDPLLARLLANRGVTDGIDGRRFLGATLADLRDPLLLRGMDAAVERLCAALRN
GEQVCVYGDYDVDGVTGTALLVSFFREVGFTCRYHIPKRLSDGYGLSEDGIRAVAERGARVIVTVDCGIGSVAEADLCAS
LGVDLIITDHHSPGPELPRALAVINPRQPGCSYPFKSLAGVGVAFNLLIALRGRLREQGCFTAGPEPNLRQYLDLVALGT
IADVVPLVEENRIFVTYGLKEMSATSRVGVTALKDVAGVAGRVGCGAVGFRLAPRLNAAGRLEDASLGVELLLTGDRSRA
ATLAAELDRSNGERQALERSILDEATAMVRANPAMASKRSIVLASDAWHPGVVGIVASRLVDRFHRPTILIALQDGTGRG
SGRSVPALHLLDALSACGEHLEKFGGHRQAAGLSIDEETLQAFVDRFEDVCAGLLGPDDLKPVVAADAELAADEVTPALV
DLIEALEPFGMGNPEPLFLLRGATICGRRVAGGHHLQLRLDLGGRQVDAVGFNLAARDGAPGERVDILFTAGWNSWNGRR
KFQLTLKDLKRSGDDRAS

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=565, Percent_Identity=40.7079646017699, Blast_Score=340, Evalue=2e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 61708; Mature: 61708

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAGNEKVWTIREPDRDVVVRLSRDLSLDPLLARLLANRGVTDGIDGRRFLGATLADLRD
CCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
PLLLRGMDAAVERLCAALRNGEQVCVYGDYDVDGVTGTALLVSFFREVGFTCRYHIPKRL
CHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCHHC
SDGYGLSEDGIRAVAERGARVIVTVDCGIGSVAEADLCASLGVDLIITDHHSPGPELPRA
CCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCE
LAVINPRQPGCSYPFKSLAGVGVAFNLLIALRGRLREQGCFTAGPEPNLRQYLDLVALGT
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
IADVVPLVEENRIFVTYGLKEMSATSRVGVTALKDVAGVAGRVGCGAVGFRLAPRLNAAG
HHHHHHHHCCCEEEEEECCHHHCCHHHCCHHHHHHHHHHCCCCCCCHHHHEECCCCCCCC
RLEDASLGVELLLTGDRSRAATLAAELDRSNGERQALERSILDEATAMVRANPAMASKRS
CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCE
IVLASDAWHPGVVGIVASRLVDRFHRPTILIALQDGTGRGSGRSVPALHLLDALSACGEH
EEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
LEKFGGHRQAAGLSIDEETLQAFVDRFEDVCAGLLGPDDLKPVVAADAELAADEVTPALV
HHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHCCHHHH
DLIEALEPFGMGNPEPLFLLRGATICGRRVAGGHHLQLRLDLGGRQVDAVGFNLAARDGA
HHHHHHHHCCCCCCCCEEEEECCHHHCCCCCCCEEEEEEEECCCCEEEEECCEEEECCCC
PGERVDILFTAGWNSWNGRRKFQLTLKDLKRSGDDRAS
CCCEEEEEEEECCCCCCCCEEEEEEHHHHHCCCCCCCC
>Mature Secondary Structure
MHAGNEKVWTIREPDRDVVVRLSRDLSLDPLLARLLANRGVTDGIDGRRFLGATLADLRD
CCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
PLLLRGMDAAVERLCAALRNGEQVCVYGDYDVDGVTGTALLVSFFREVGFTCRYHIPKRL
CHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCHHC
SDGYGLSEDGIRAVAERGARVIVTVDCGIGSVAEADLCASLGVDLIITDHHSPGPELPRA
CCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCE
LAVINPRQPGCSYPFKSLAGVGVAFNLLIALRGRLREQGCFTAGPEPNLRQYLDLVALGT
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
IADVVPLVEENRIFVTYGLKEMSATSRVGVTALKDVAGVAGRVGCGAVGFRLAPRLNAAG
HHHHHHHHCCCEEEEEECCHHHCCHHHCCHHHHHHHHHHCCCCCCCHHHHEECCCCCCCC
RLEDASLGVELLLTGDRSRAATLAAELDRSNGERQALERSILDEATAMVRANPAMASKRS
CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCE
IVLASDAWHPGVVGIVASRLVDRFHRPTILIALQDGTGRGSGRSVPALHLLDALSACGEH
EEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
LEKFGGHRQAAGLSIDEETLQAFVDRFEDVCAGLLGPDDLKPVVAADAELAADEVTPALV
HHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHCCHHHH
DLIEALEPFGMGNPEPLFLLRGATICGRRVAGGHHLQLRLDLGGRQVDAVGFNLAARDGA
HHHHHHHHCCCCCCCCEEEEECCHHHCCCCCCCEEEEEEEECCCCEEEEECCEEEECCCC
PGERVDILFTAGWNSWNGRRKFQLTLKDLKRSGDDRAS
CCCEEEEEEEECCCCCCCCEEEEEEHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]