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The map label for this gene is yjiL [H]

Identifier: 39997615

GI number: 39997615

Start: 2778846

End: 2779607

Strand: Reverse

Name: yjiL [H]

Synonym: GSU2520

Alternate gene names: 39997615

Gene position: 2779607-2778846 (Counterclockwise)

Preceding gene: 39997616

Following gene: 39997614

Centisome position: 72.88

GC content: 67.98

Gene sequence:

>762_bases
ATGGTGAGTGTCGGGATCGACATCGGCTCCACCGCCACCAAGGCAGTCGTGTTCGACGGCATGGTTCGCGGCCGGGCAGT
GGTACCCACCGGCTGGGAGCCGCGCGAGGCGGGCCTTCGGGCCTTTCGCGAAGCTCTTTCGTCCGCCGGCCTCCGGGAAG
AAAGCGTCTCCCGCGTGGTGGGCACCGGTTACGGCCGGGTATCTCTGCCGTTCAGCGACCAGCGGGTCACGGAGATTTCC
TGTCACGCGCGCGGGGCCTGGTACCTGAATCCCGACACCCGCGCGGTCATCGATATCGGCGGCCAGGACAGCAAGGTCAT
CCTGGTAAGCGACGACGGGTCGGTATCCGACTTCATCATGAACGACAAGTGCGCCGCGGGCACCGGCCGTTTTCTCCAGG
TCATGGCGGGCATCCTCGACCTCACCCTCGACGAGCTCGGCTCCCTGGCCGCGTCCAGCGAACCGGTGCCGCTCACCAGC
ATGTGCACGGTCTTCGCCGAATCGGAAATCATCGGCCTCCTCGCCCAGGGAACGCCCAAGGGCGCCATTGCGGCCGGCAT
CATCGACGCCATCGCCCGCCGGATGGAAGGGCTGGTGGGGCGGCTGGAAGCCCACGAGGGGATTACCTTCACCGGGGGAC
TCGCCACCAACGGCTCCATCAGCGGCGTCATCGCCCGGCGGCTGGGGCTTTCCCTGCACGTGCCGGAAGACCCCCAGATC
GTGGGCGCCCTCGGCGCCGCCCTCATCGGCTGCAATGCGTAG

Upstream 100 bases:

>100_bases
TTCACCACGGCCGAGGCGCTGCTCACGGCCGGTTCCGTCATTCGCCTGTAATGGGTGCTGATTGTGTGATGCCGCGGCGC
TGCTGCGGCGGGAGGCAGAT

Downstream 100 bases:

>100_bases
CATGCCGGTCCGGAAAGAGGCCATCCCGTCGCCATGATACATTCAGAAACCTTTGCCGAGATTGCCACCCTCAAGGAGCG
CAATCTCATCGCCCTCAAGG

Product: (R)-2-hydroxyglutaryl-CoA dehydratase activator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MVSVGIDIGSTATKAVVFDGMVRGRAVVPTGWEPREAGLRAFREALSSAGLREESVSRVVGTGYGRVSLPFSDQRVTEIS
CHARGAWYLNPDTRAVIDIGGQDSKVILVSDDGSVSDFIMNDKCAAGTGRFLQVMAGILDLTLDELGSLAASSEPVPLTS
MCTVFAESEIIGLLAQGTPKGAIAAGIIDAIARRMEGLVGRLEAHEGITFTGGLATNGSISGVIARRLGLSLHVPEDPQI
VGALGAALIGCNA

Sequences:

>Translated_253_residues
MVSVGIDIGSTATKAVVFDGMVRGRAVVPTGWEPREAGLRAFREALSSAGLREESVSRVVGTGYGRVSLPFSDQRVTEIS
CHARGAWYLNPDTRAVIDIGGQDSKVILVSDDGSVSDFIMNDKCAAGTGRFLQVMAGILDLTLDELGSLAASSEPVPLTS
MCTVFAESEIIGLLAQGTPKGAIAAGIIDAIARRMEGLVGRLEAHEGITFTGGLATNGSISGVIARRLGLSLHVPEDPQI
VGALGAALIGCNA
>Mature_253_residues
MVSVGIDIGSTATKAVVFDGMVRGRAVVPTGWEPREAGLRAFREALSSAGLREESVSRVVGTGYGRVSLPFSDQRVTEIS
CHARGAWYLNPDTRAVIDIGGQDSKVILVSDDGSVSDFIMNDKCAAGTGRFLQVMAGILDLTLDELGSLAASSEPVPLTS
MCTVFAESEIIGLLAQGTPKGAIAAGIIDAIARRMEGLVGRLEAHEGITFTGGLATNGSISGVIARRLGLSLHVPEDPQI
VGALGAALIGCNA

Specific function: Unknown

COG id: COG1924

COG function: function code I; Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082426, Length=251, Percent_Identity=47.4103585657371, Blast_Score=214, Evalue=3e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002731
- InterPro:   IPR008275 [H]

Pfam domain/function: PF01869 BcrAD_BadFG [H]

EC number: NA

Molecular weight: Translated: 26137; Mature: 26137

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVGIDIGSTATKAVVFDGMVRGRAVVPTGWEPREAGLRAFREALSSAGLREESVSRVV
CEEEEECCCCCHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
GTGYGRVSLPFSDQRVTEISCHARGAWYLNPDTRAVIDIGGQDSKVILVSDDGSVSDFIM
HCCCCEEECCCCCCCEEEEEEECCCEEEECCCCEEEEEECCCCCEEEEEECCCCCHHHEE
NDKCAAGTGRFLQVMAGILDLTLDELGSLAASSEPVPLTSMCTVFAESEIIGLLAQGTPK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCCC
GAIAAGIIDAIARRMEGLVGRLEAHEGITFTGGLATNGSISGVIARRLGLSLHVPEDPQI
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCEEECCCCCHH
VGALGAALIGCNA
HHHHHHHHHCCCC
>Mature Secondary Structure
MVSVGIDIGSTATKAVVFDGMVRGRAVVPTGWEPREAGLRAFREALSSAGLREESVSRVV
CEEEEECCCCCHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
GTGYGRVSLPFSDQRVTEISCHARGAWYLNPDTRAVIDIGGQDSKVILVSDDGSVSDFIM
HCCCCEEECCCCCCCEEEEEEECCCEEEECCCCEEEEEECCCCCEEEEEECCCCCHHHEE
NDKCAAGTGRFLQVMAGILDLTLDELGSLAASSEPVPLTSMCTVFAESEIIGLLAQGTPK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCCC
GAIAAGIIDAIARRMEGLVGRLEAHEGITFTGGLATNGSISGVIARRLGLSLHVPEDPQI
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCEEECCCCCHH
VGALGAALIGCNA
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]