Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is pspE [C]

Identifier: 39997611

GI number: 39997611

Start: 2774345

End: 2775088

Strand: Reverse

Name: pspE [C]

Synonym: GSU2516

Alternate gene names: 39997611

Gene position: 2775088-2774345 (Counterclockwise)

Preceding gene: 39997612

Following gene: 39997609

Centisome position: 72.76

GC content: 61.56

Gene sequence:

>744_bases
ATGAAACAAATTGTGCAGCGTGCGCTGGCATGCGCCGTCCTGGCCCTCGGCATCCTGGCCGGCGGTGCCGGCTGGGCCGC
CGGGGATTACCCGGTCGTGACCACGGACCACCTGAAGGCCATGATCGACGAGAAGCGGGATTTCCTGCTGATCGATGCCC
GGACCCCCGAAGAGTATGCGGAAGCGCACATCGTCGGAGCGGTCAACGTGCCGGAGAAGACCTTCGACAGCGCTTCGGCG
CAACTCCCGGCCGACAAGGCGAAGCTCATCGTTCTCTACTGCAACGGTATCAAGTGCGGCAAAAGCAAGCGGGTGGCCAA
AAAGGTGGAACCCCTGGGCTACACCGCCATTGCCGTTTATAACGAAGGGATGCCGGTCTGGGAAGAGCGGGGTCTCCCCA
TCGTCAAGGGGGCGGGCTACGGCAGGAAGATCGAGACGACCATAGTCCCGGCAGCCGAGCTGGACCGGATGATCCGCTCC
GGCAGCCAGGACTATGTCCTGATCGACGTGAGGGATGATATGGAGTTCGAGGAGGGGCACATCCCCACGGCCATCAATAT
CCCGGCCGAGCAGCTTGCGGCACGGTCCGACCAACTGCCCAAGGAAAAGAAGATCATTGTCTACTGCAATACGGGCAGCC
GCAGCTACATGGCCTACAAGAAGCTGATCGGCCTCGCCTATCCCTCAATATTCCAGTCGCTGTTCGTCGAGTGGAAGGAG
GCGGGGCTGCCGGTAGCAAGGTAG

Upstream 100 bases:

>100_bases
GTCCGGCCGAAGCGATCCGTCTGATGTTGTGTCGCCCCCGCGCGGGGTTATGAAATCCGGGCGTTCCTGCCCGAGCCTGT
CACCCAAAGGAGGAAGAACC

Downstream 100 bases:

>100_bases
TGTCCCGATTGGTACGTTCCTGGTGGTAATTATGGTCGGTTCGATCGCTGTGGCGTCACGGCTGCCTCACGTTGCCGGAC
GCGTGCGTCGCAGCGCCGGC

Product: rhodanese-like domain-containing protein

Products: NA

Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese-Like Protein; Rhodanese-Like Domain-Containing Protein; Sulfur Transferase; Transferase; Thiosulfate Sulfurtransferase; Molybdopterin Biosynthesis Protein; Rhodanese-Like Family Protein; Rhodanese-Like Sulfur Transferase; Thiosulfate Sulfurtransferase Rhodanese-Like; Beta-Lactamase Domain Protein; Sulfur Transferase Selenocysteine-Containing Protein; Sulfur Transferase Selenocysteine-Containing; Rhodanese Domain Protein/Cystathionine Beta-Lyase; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Hydrolase; Copper Amine Oxidase Domain Protein; Rhodanese-Related Sulfurtransferase; Beta-Lactamase Domain-Containing Protein

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKQIVQRALACAVLALGILAGGAGWAAGDYPVVTTDHLKAMIDEKRDFLLIDARTPEEYAEAHIVGAVNVPEKTFDSASA
QLPADKAKLIVLYCNGIKCGKSKRVAKKVEPLGYTAIAVYNEGMPVWEERGLPIVKGAGYGRKIETTIVPAAELDRMIRS
GSQDYVLIDVRDDMEFEEGHIPTAINIPAEQLAARSDQLPKEKKIIVYCNTGSRSYMAYKKLIGLAYPSIFQSLFVEWKE
AGLPVAR

Sequences:

>Translated_247_residues
MKQIVQRALACAVLALGILAGGAGWAAGDYPVVTTDHLKAMIDEKRDFLLIDARTPEEYAEAHIVGAVNVPEKTFDSASA
QLPADKAKLIVLYCNGIKCGKSKRVAKKVEPLGYTAIAVYNEGMPVWEERGLPIVKGAGYGRKIETTIVPAAELDRMIRS
GSQDYVLIDVRDDMEFEEGHIPTAINIPAEQLAARSDQLPKEKKIIVYCNTGSRSYMAYKKLIGLAYPSIFQSLFVEWKE
AGLPVAR
>Mature_247_residues
MKQIVQRALACAVLALGILAGGAGWAAGDYPVVTTDHLKAMIDEKRDFLLIDARTPEEYAEAHIVGAVNVPEKTFDSASA
QLPADKAKLIVLYCNGIKCGKSKRVAKKVEPLGYTAIAVYNEGMPVWEERGLPIVKGAGYGRKIETTIVPAAELDRMIRS
GSQDYVLIDVRDDMEFEEGHIPTAINIPAEQLAARSDQLPKEKKIIVYCNTGSRSYMAYKKLIGLAYPSIFQSLFVEWKE
AGLPVAR

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27057; Mature: 27057

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIVQRALACAVLALGILAGGAGWAAGDYPVVTTDHLKAMIDEKRDFLLIDARTPEEYA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHCCCCCEEEEECCCCHHHH
EAHIVGAVNVPEKTFDSASAQLPADKAKLIVLYCNGIKCGKSKRVAKKVEPLGYTAIAVY
HEEEEEEECCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCEEEEEEE
NEGMPVWEERGLPIVKGAGYGRKIETTIVPAAELDRMIRSGSQDYVLIDVRDDMEFEEGH
ECCCCCHHHCCCCEEECCCCCCEEEEEEECHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
IPTAINIPAEQLAARSDQLPKEKKIIVYCNTGSRSYMAYKKLIGLAYPSIFQSLFVEWKE
CCEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLPVAR
CCCCCCC
>Mature Secondary Structure
MKQIVQRALACAVLALGILAGGAGWAAGDYPVVTTDHLKAMIDEKRDFLLIDARTPEEYA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHCCCCCEEEEECCCCHHHH
EAHIVGAVNVPEKTFDSASAQLPADKAKLIVLYCNGIKCGKSKRVAKKVEPLGYTAIAVY
HEEEEEEECCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCEEEEEEE
NEGMPVWEERGLPIVKGAGYGRKIETTIVPAAELDRMIRSGSQDYVLIDVRDDMEFEEGH
ECCCCCHHHCCCCEEECCCCCCEEEEEEECHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
IPTAINIPAEQLAARSDQLPKEKKIIVYCNTGSRSYMAYKKLIGLAYPSIFQSLFVEWKE
CCEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLPVAR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA