| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is yjhP [H]
Identifier: 39997536
GI number: 39997536
Start: 2674961
End: 2675707
Strand: Reverse
Name: yjhP [H]
Synonym: GSU2441
Alternate gene names: 39997536
Gene position: 2675707-2674961 (Counterclockwise)
Preceding gene: 39997537
Following gene: 39997535
Centisome position: 70.15
GC content: 63.32
Gene sequence:
>747_bases TTGGACATTCCACGGATTTTTACCATCACCGAAAGCGCTCACCGCATCCATAACCCGATTACACCCGAAAAGCTCACCAC TCTCGGCGCGGCGCTGCGTCTGGAACCGGGGACCCGAGTGCTGGACCTGGGCAGCGGTTCGGGGGAGATGCTGTGCACCT GGGCACGCGATCACGGCATCATCGGCACCGGCATCGATATGAGTCAGTTGTTCACCGCGCAAGCGAAACTCCGCGCCGAA GAGCTCGGCGTTGCCGATCGCGTCACGTTCATCCATGGCGATGCTAGCGGCTACGTGTCGGACGACAAGGCCGGTGTGGC AGCCTGTGTCGGTGCCACGTGGATCGGCGGGGGAGTCGCCGGCACTATCGAGCTGCTGGCGCGGAGCCTGCGCCCCGGGG GGATCATCCTCATCGGCGAGCCCTACTGGCGGCAGGTGCCGCCGACGGAAGATGTTGCCAGGGGGTGTCTTGCCAACTCG ACCTCCGACTTTCTCATGCTCCCGGAACTTCTCGCGTCGTTCGGCCGGCTTGGCTATGACGTCGTTGAAATGGTTCTGGC CGACCAAGATGGCTGGGACAGATACGAGGCGGCCAAATGGCTCACCATGCGCCGATGGCTTGAAGCCAATCCCGACGACG AGTTGGCGAAAGAGGTTCGAGCCCAACTGACCTCGGAGCCTGGGCGCTACGCCTCGTACACGCGTGAATACCTGGGCTGG GGTGTGTTCGCGCTGATGCCGCGGTGA
Upstream 100 bases:
>100_bases CATGGCACAGGCAGAACCCGGGGGACACCTTGTTTATTGACCCGCCCAGAATTCCCCCGGGATTTCGAATCAATCCACAC CCATAAGGAGATTTTCTGCA
Downstream 100 bases:
>100_bases TGCGTTGGCGCAGTATTCCGGGGGCATCTTGGTTGATTCCAGATGAGATATGTAAGGTTTCCCCGGAATTTGGTCCGTTC GTTGTGACAACAGGTGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MDIPRIFTITESAHRIHNPITPEKLTTLGAALRLEPGTRVLDLGSGSGEMLCTWARDHGIIGTGIDMSQLFTAQAKLRAE ELGVADRVTFIHGDASGYVSDDKAGVAACVGATWIGGGVAGTIELLARSLRPGGIILIGEPYWRQVPPTEDVARGCLANS TSDFLMLPELLASFGRLGYDVVEMVLADQDGWDRYEAAKWLTMRRWLEANPDDELAKEVRAQLTSEPGRYASYTREYLGW GVFALMPR
Sequences:
>Translated_248_residues MDIPRIFTITESAHRIHNPITPEKLTTLGAALRLEPGTRVLDLGSGSGEMLCTWARDHGIIGTGIDMSQLFTAQAKLRAE ELGVADRVTFIHGDASGYVSDDKAGVAACVGATWIGGGVAGTIELLARSLRPGGIILIGEPYWRQVPPTEDVARGCLANS TSDFLMLPELLASFGRLGYDVVEMVLADQDGWDRYEAAKWLTMRRWLEANPDDELAKEVRAQLTSEPGRYASYTREYLGW GVFALMPR >Mature_248_residues MDIPRIFTITESAHRIHNPITPEKLTTLGAALRLEPGTRVLDLGSGSGEMLCTWARDHGIIGTGIDMSQLFTAQAKLRAE ELGVADRVTFIHGDASGYVSDDKAGVAACVGATWIGGGVAGTIELLARSLRPGGIILIGEPYWRQVPPTEDVARGCLANS TSDFLMLPELLASFGRLGYDVVEMVLADQDGWDRYEAAKWLTMRRWLEANPDDELAKEVRAQLTSEPGRYASYTREYLGW GVFALMPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790760, Length=248, Percent_Identity=74.5967741935484, Blast_Score=391, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR017031 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 27096; Mature: 27096
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIPRIFTITESAHRIHNPITPEKLTTLGAALRLEPGTRVLDLGSGSGEMLCTWARDHGI CCCCEEEEECCHHHHHCCCCCHHHHHHHHHHEEECCCCEEEEECCCCCCEEEEEECCCCE IGTGIDMSQLFTAQAKLRAEELGVADRVTFIHGDASGYVSDDKAGVAACVGATWIGGGVA EECCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHH GTIELLARSLRPGGIILIGEPYWRQVPPTEDVARGCLANSTSDFLMLPELLASFGRLGYD HHHHHHHHHCCCCCEEEECCCHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHH VVEMVLADQDGWDRYEAAKWLTMRRWLEANPDDELAKEVRAQLTSEPGRYASYTREYLGW HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC GVFALMPR CCEEECCC >Mature Secondary Structure MDIPRIFTITESAHRIHNPITPEKLTTLGAALRLEPGTRVLDLGSGSGEMLCTWARDHGI CCCCEEEEECCHHHHHCCCCCHHHHHHHHHHEEECCCCEEEEECCCCCCEEEEEECCCCE IGTGIDMSQLFTAQAKLRAEELGVADRVTFIHGDASGYVSDDKAGVAACVGATWIGGGVA EECCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHH GTIELLARSLRPGGIILIGEPYWRQVPPTEDVARGCLANSTSDFLMLPELLASFGRLGYD HHHHHHHHHCCCCCEEEECCCHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHH VVEMVLADQDGWDRYEAAKWLTMRRWLEANPDDELAKEVRAQLTSEPGRYASYTREYLGW HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC GVFALMPR CCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]