| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997498
Identifier: 39997498
GI number: 39997498
Start: 2638725
End: 2639726
Strand: Reverse
Name: 39997498
Synonym: GSU2403
Alternate gene names: NA
Gene position: 2639726-2638725 (Counterclockwise)
Preceding gene: 39997499
Following gene: 39997489
Centisome position: 69.21
GC content: 51.7
Gene sequence:
>1002_bases TTGAATATAAGATGTTTTCCGTATAAAACTCTAAATATGAAAAAAATACGGAAAAAGTATCAGTGGATTGATATAGGTGA AGATGCCAGACGTCAATATATCGACGCTCAAGCAACGTTCACGGCTTGGGAAGATGCCCGAAAAGCTGCTTCCGAAGTAC GCGGAGGCATGTATTGGAAGCGACAGGGCGAAACGGAATACCTGATCCGGACGTCCCCCGGCAACGCTCAAAAAAGTATT GGTCCTCGCTCTGAGAAGACGGAGCAGATTTACCGGAATTTCACTGCCAGAAAAGCTGAAGCCGAGCAAAGGCTCGCAGA TCTTACCAGCGCACTAGAGCGACAACAGCGGATGAACCGGGCGCTCTTTGTCGGCCGGGCGCCTCGTATCCTCATCGACA TACTGAACAAGCTCGTAAAAGTAGGGCTTTCGGAATATTTCACGGTTATTGGCACCCATTCCCTCTACGCCTATGAAGCT GCCGCGGGCGTTGGTTTTGGAGAAGCGGCAGCATTGGCAACCCAGGACATTGACCTTCTTCTGGATACCCGGAAGCGTCT GAGCTTTATCACGCAGATGACCACCATGGGTACATCGATGCTGAAGCTGATACAGAAGGTAGATCCCACCTTCAGGATCC GCGACGACCAGAAATACACGGCCGTCAACAGCAAGGGTTTTGAAGTCGATATCATCCGAAGGGAGCCGAAAGACGGTGAT CCCCACCCGCTGCGGCTGACTGACGAGGATGATGAGTTCTATGCCGTACCGGCCCGGAATGCTGGTTTACTTCTCGATGG GCCGCGTTTTTCCGCGATGATCATTGCCACGACCGGCCACATGGCAAGGATGAACACTATTTCTCCGGCTGCCTTTGTCA GGTTCAAACGATGGATGGCTGAACAGCCTGATCGGGACCCCATGAAGCGCCAAAGAGACATCCTGCAGGCAAATATGGTC GAAGAGTTGATTGTCGAATACCTGCCCCACCTCCAGCAATAA
Upstream 100 bases:
>100_bases AGCAAGGCGCAACAGATCATCAGCGCAGTGGGCGCACTTCTTTCAACGTAGACTGGCTGTATGAGGGAAAGAGCCTTACT GTTCAAATAGAATTATCTAC
Downstream 100 bases:
>100_bases CCAGAAGAATTCCCCGATTTCGATGAAGCCTCGTCGATAGTGTCAGGGAGTTATCTTTATTCAGATACATACGTACACTC CTGGACACAGCACGTTAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MNIRCFPYKTLNMKKIRKKYQWIDIGEDARRQYIDAQATFTAWEDARKAASEVRGGMYWKRQGETEYLIRTSPGNAQKSI GPRSEKTEQIYRNFTARKAEAEQRLADLTSALERQQRMNRALFVGRAPRILIDILNKLVKVGLSEYFTVIGTHSLYAYEA AAGVGFGEAAALATQDIDLLLDTRKRLSFITQMTTMGTSMLKLIQKVDPTFRIRDDQKYTAVNSKGFEVDIIRREPKDGD PHPLRLTDEDDEFYAVPARNAGLLLDGPRFSAMIIATTGHMARMNTISPAAFVRFKRWMAEQPDRDPMKRQRDILQANMV EELIVEYLPHLQQ
Sequences:
>Translated_333_residues MNIRCFPYKTLNMKKIRKKYQWIDIGEDARRQYIDAQATFTAWEDARKAASEVRGGMYWKRQGETEYLIRTSPGNAQKSI GPRSEKTEQIYRNFTARKAEAEQRLADLTSALERQQRMNRALFVGRAPRILIDILNKLVKVGLSEYFTVIGTHSLYAYEA AAGVGFGEAAALATQDIDLLLDTRKRLSFITQMTTMGTSMLKLIQKVDPTFRIRDDQKYTAVNSKGFEVDIIRREPKDGD PHPLRLTDEDDEFYAVPARNAGLLLDGPRFSAMIIATTGHMARMNTISPAAFVRFKRWMAEQPDRDPMKRQRDILQANMV EELIVEYLPHLQQ >Mature_333_residues MNIRCFPYKTLNMKKIRKKYQWIDIGEDARRQYIDAQATFTAWEDARKAASEVRGGMYWKRQGETEYLIRTSPGNAQKSI GPRSEKTEQIYRNFTARKAEAEQRLADLTSALERQQRMNRALFVGRAPRILIDILNKLVKVGLSEYFTVIGTHSLYAYEA AAGVGFGEAAALATQDIDLLLDTRKRLSFITQMTTMGTSMLKLIQKVDPTFRIRDDQKYTAVNSKGFEVDIIRREPKDGD PHPLRLTDEDDEFYAVPARNAGLLLDGPRFSAMIIATTGHMARMNTISPAAFVRFKRWMAEQPDRDPMKRQRDILQANMV EELIVEYLPHLQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38263; Mature: 38263
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRCFPYKTLNMKKIRKKYQWIDIGEDARRQYIDAQATFTAWEDARKAASEVRGGMYWK CCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEE RQGETEYLIRTSPGNAQKSIGPRSEKTEQIYRNFTARKAEAEQRLADLTSALERQQRMNR ECCCCEEEEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFVGRAPRILIDILNKLVKVGLSEYFTVIGTHSLYAYEAAAGVGFGEAAALATQDIDLL HEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHCCCCCCHHHHHHHHHHHHH LDTRKRLSFITQMTTMGTSMLKLIQKVDPTFRIRDDQKYTAVNSKGFEVDIIRREPKDGD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCEEEEEECCCCCCC PHPLRLTDEDDEFYAVPARNAGLLLDGPRFSAMIIATTGHMARMNTISPAAFVRFKRWMA CCCEEECCCCCCEEEECCCCCCEEEECCCCEEEEEEECCCHHHCCCCCHHHHHHHHHHHH EQPDRDPMKRQRDILQANMVEELIVEYLPHLQQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNIRCFPYKTLNMKKIRKKYQWIDIGEDARRQYIDAQATFTAWEDARKAASEVRGGMYWK CCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEE RQGETEYLIRTSPGNAQKSIGPRSEKTEQIYRNFTARKAEAEQRLADLTSALERQQRMNR ECCCCEEEEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFVGRAPRILIDILNKLVKVGLSEYFTVIGTHSLYAYEAAAGVGFGEAAALATQDIDLL HEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHCCCCCCHHHHHHHHHHHHH LDTRKRLSFITQMTTMGTSMLKLIQKVDPTFRIRDDQKYTAVNSKGFEVDIIRREPKDGD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCEEEEEECCCCCCC PHPLRLTDEDDEFYAVPARNAGLLLDGPRFSAMIIATTGHMARMNTISPAAFVRFKRWMA CCCEEECCCCCCEEEECCCCCCEEEECCCCEEEEEEECCCHHHCCCCCHHHHHHHHHHHH EQPDRDPMKRQRDILQANMVEELIVEYLPHLQQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA