| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is ald [H]
Identifier: 39997390
GI number: 39997390
Start: 2510112
End: 2511209
Strand: Reverse
Name: ald [H]
Synonym: GSU2292
Alternate gene names: 39997390
Gene position: 2511209-2510112 (Counterclockwise)
Preceding gene: 39997393
Following gene: 39997386
Centisome position: 65.84
GC content: 65.12
Gene sequence:
>1098_bases ATGATCATAGGTGTGCCCCGGGAGATAAAGGTCCACGAATACCGGGTCGGCATGACGCCGGCCGGCGCAGCTGAGCTCAC GCGGGAAGGACACAGGGTTCTCGTTGAGGCGGGCGCGGGCGAGGGGAGCGGTTTTGCCGACGATGATTTTCTTCGCTCCG GTGCCCGGGTGGTGGGCCGGGATAACCTCTTCGGTCAGGCCGAGCTCATTGTCAAAGTGAAGGAGCCGCTGCCGGACGAG TATGCGCTGCTGCAGCCCGGGCAGGCGCTTTTTACCTATCTCCACCTGGCTCCAAACGAGGCGCTGGCCCGTGCGCTGCT GAAACGCAGCGTGACCGCTATTGGTTACGAAACCCTGGAGAAGGGGGGAGCGCTGCCGCTGCTTGCGCCGATGAGCGAGA TCGCCGGCCGGATGGCCCCCCTGGTGGGAGCGTTTTATCTCCAGCGGATTCACGGCGGCACGGGAACGCTGCCCCCCGGC GTTCCCGGCGTAGCTGCAGGGCGGGCGCTTATCCTCGGCGCTGGGGTGGTGGGCAGTGCCGCGGCACGGGTCTGCCTCGG CCTCGGCATGGAAACAACGGTTATGAACAGGGGGATCGAACGGCTTCAGAGCCTTGACGACATCTTCAACGGAAGGCTTC GGACCCTGGTCCTCACGGCCGATGCCCTGGCGGATCATCTTCGGGATGCCGATCTGGTGGTTGGTGCGCTGCTGGTTCCC GGCGGCCGTACTCCGGTACTTATTACCCGTCCCATGCTCGCGACCATGCGGAAGGGGGCGGTCATTGTTGACGTTGCCGT CGACCAGGGTGGATGCGTCGCCACGAGCCGGCCGACCACGCACGACAAGCCTGTGTACGAAGTGGACGGCATCATTCACT ACACCGTGGCCAATATGCCGGGCGCCTATCCCCGCACATCCACCCTGGCGCTCACCAACGCGACCCTTCCCTACGTGCGG TTGCTGGCAAACGTTGGTATTGAGGAAGCGTTGAGGCGCGACCCCGCCCTGGGGGGAGCCCTCAATACCTGGCGGGGCGG CATCGCTCACCATGCCCTGGCCGAAGCCCTGGAACTGCCCCGCGTTACCTTTGCCTGA
Upstream 100 bases:
>100_bases GAAAGAAAGGAGTGTGTGCAGGGCTGCGTCATGCCGAATCACTATCCTGAGGTATACTGAAAACCCAGAGTACCTCTATC CGATGCGGAGGGATTGAGCC
Downstream 100 bases:
>100_bases CCGTGGGCTTACCCGTGCAGGGGCCTGCCTCCCGCGGCCTTGAGGCGGTCGTGGGCCGAGCGCAGGATGGTTTCGGTGGT CTTCCAGTCAATGCACTTGT
Product: alanine dehydrogenase
Products: NA
Alternate protein names: Stage V sporulation protein N [H]
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MIIGVPREIKVHEYRVGMTPAGAAELTREGHRVLVEAGAGEGSGFADDDFLRSGARVVGRDNLFGQAELIVKVKEPLPDE YALLQPGQALFTYLHLAPNEALARALLKRSVTAIGYETLEKGGALPLLAPMSEIAGRMAPLVGAFYLQRIHGGTGTLPPG VPGVAAGRALILGAGVVGSAAARVCLGLGMETTVMNRGIERLQSLDDIFNGRLRTLVLTADALADHLRDADLVVGALLVP GGRTPVLITRPMLATMRKGAVIVDVAVDQGGCVATSRPTTHDKPVYEVDGIIHYTVANMPGAYPRTSTLALTNATLPYVR LLANVGIEEALRRDPALGGALNTWRGGIAHHALAEALELPRVTFA
Sequences:
>Translated_365_residues MIIGVPREIKVHEYRVGMTPAGAAELTREGHRVLVEAGAGEGSGFADDDFLRSGARVVGRDNLFGQAELIVKVKEPLPDE YALLQPGQALFTYLHLAPNEALARALLKRSVTAIGYETLEKGGALPLLAPMSEIAGRMAPLVGAFYLQRIHGGTGTLPPG VPGVAAGRALILGAGVVGSAAARVCLGLGMETTVMNRGIERLQSLDDIFNGRLRTLVLTADALADHLRDADLVVGALLVP GGRTPVLITRPMLATMRKGAVIVDVAVDQGGCVATSRPTTHDKPVYEVDGIIHYTVANMPGAYPRTSTLALTNATLPYVR LLANVGIEEALRRDPALGGALNTWRGGIAHHALAEALELPRVTFA >Mature_365_residues MIIGVPREIKVHEYRVGMTPAGAAELTREGHRVLVEAGAGEGSGFADDDFLRSGARVVGRDNLFGQAELIVKVKEPLPDE YALLQPGQALFTYLHLAPNEALARALLKRSVTAIGYETLEKGGALPLLAPMSEIAGRMAPLVGAFYLQRIHGGTGTLPPG VPGVAAGRALILGAGVVGSAAARVCLGLGMETTVMNRGIERLQSLDDIFNGRLRTLVLTADALADHLRDADLVVGALLVP GGRTPVLITRPMLATMRKGAVIVDVAVDQGGCVATSRPTTHDKPVYEVDGIIHYTVANMPGAYPRTSTLALTNATLPYVR LLANVGIEEALRRDPALGGALNTWRGGIAHHALAEALELPRVTFA
Specific function: This enzyme is a key factor in the assimilation of L- alanine as an energy source through the tricarboxylic acid cycle during sporulation [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=347, Percent_Identity=28.5302593659942, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI122939153, Length=347, Percent_Identity=28.5302593659942, Blast_Score=129, Evalue=6e-30, Organism=Escherichia coli, GI1787887, Length=336, Percent_Identity=32.1428571428571, Blast_Score=136, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17550456, Length=338, Percent_Identity=28.9940828402367, Blast_Score=140, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 38410; Mature: 38410
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIGVPREIKVHEYRVGMTPAGAAELTREGHRVLVEAGAGEGSGFADDDFLRSGARVVGR CEECCCCCEEEEEEEECCCCCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCCEEEC DNLFGQAELIVKVKEPLPDEYALLQPGQALFTYLHLAPNEALARALLKRSVTAIGYETLE CCCCCCEEEEEEECCCCCCCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KGGALPLLAPMSEIAGRMAPLVGAFYLQRIHGGTGTLPPGVPGVAAGRALILGAGVVGSA CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEEECCHHHHH AARVCLGLGMETTVMNRGIERLQSLDDIFNGRLRTLVLTADALADHLRDADLVVGALLVP HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCHHHHEEHEEEC GGRTPVLITRPMLATMRKGAVIVDVAVDQGGCVATSRPTTHDKPVYEVDGIIHYTVANMP CCCCCEEEECHHHHHHCCCCEEEEEEECCCCEEECCCCCCCCCCCEEECCEEEEEECCCC GAYPRTSTLALTNATLPYVRLLANVGIEEALRRDPALGGALNTWRGGIAHHALAEALELP CCCCCCCEEEEECCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHCC RVTFA CCCCC >Mature Secondary Structure MIIGVPREIKVHEYRVGMTPAGAAELTREGHRVLVEAGAGEGSGFADDDFLRSGARVVGR CEECCCCCEEEEEEEECCCCCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCCEEEC DNLFGQAELIVKVKEPLPDEYALLQPGQALFTYLHLAPNEALARALLKRSVTAIGYETLE CCCCCCEEEEEEECCCCCCCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KGGALPLLAPMSEIAGRMAPLVGAFYLQRIHGGTGTLPPGVPGVAAGRALILGAGVVGSA CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEEECCHHHHH AARVCLGLGMETTVMNRGIERLQSLDDIFNGRLRTLVLTADALADHLRDADLVVGALLVP HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCHHHHEEHEEEC GGRTPVLITRPMLATMRKGAVIVDVAVDQGGCVATSRPTTHDKPVYEVDGIIHYTVANMP CCCCCEEEECHHHHHHCCCCEEEEEEECCCCEEECCCCCCCCCCCEEECCEEEEEECCCC GAYPRTSTLALTNATLPYVRLLANVGIEEALRRDPALGGALNTWRGGIAHHALAEALELP CCCCCCCEEEEECCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHCC RVTFA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226620; 9384377 [H]